RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 NISCHQ9Y2I1 1504 aa33.03■■■□□ 2.88
DDX1-201ENST00000233084 CCDC180Q9P1Z9 1646 aa28.95■■■□□ 2.23
DDX1-201ENST00000233084 ZCCHC6Q5VYS8 1495 aaKnown RBP27.71■■■□□ 2.03
DDX1-201ENST00000233084 ABCC9O60706 1549 aa27.54■■■□□ 2
DDX1-201ENST00000233084 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
DDX1-201ENST00000233084 DCAF8L2P0C7V8 631 aa27.24■■□□□ 1.95
DDX1-201ENST00000233084 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
DDX1-201ENST00000233084 NACADO15069 1562 aa26.98■■□□□ 1.91
DDX1-201ENST00000233084 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
DDX1-201ENST00000233084 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
DDX1-201ENST00000233084 HRCP23327 699 aa26.68■■□□□ 1.86
DDX1-201ENST00000233084 SCRIBQ14160 1630 aa26.58■■□□□ 1.84
DDX1-201ENST00000233084 UNC13AQ9UPW8 1703 aa26.38■■□□□ 1.81
DDX1-201ENST00000233084 PPARGC1BQ86YN6 1023 aaKnown RBP26.32■■□□□ 1.8
DDX1-201ENST00000233084 PCGF6Q9BYE7 350 aa26.19■■□□□ 1.78
DDX1-201ENST00000233084 SUPT5HO00267 1087 aaKnown RBP26.1■■□□□ 1.77
DDX1-201ENST00000233084 BICRAQ9NZM4 1560 aa26.06■■□□□ 1.76
DDX1-201ENST00000233084 PELP1Q8IZL8 1130 aaKnown RBP25.94■■□□□ 1.74
DDX1-201ENST00000233084 PABPN1Q86U42 306 aaKnown RBP eCLIP25.89■■□□□ 1.73
DDX1-201ENST00000233084 CECR2Q9BXF3 1484 aa25.69■■□□□ 1.7
DDX1-201ENST00000233084 CHIC1Q5VXU3 224 aa25.59■■□□□ 1.69
DDX1-201ENST00000233084 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
DDX1-201ENST00000233084 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
DDX1-201ENST00000233084 BAZ1AQ9NRL2 1556 aaPredicted RBP25.51■■□□□ 1.67
DDX1-201ENST00000233084 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
DDX1-201ENST00000233084 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
DDX1-201ENST00000233084 WIZO95785 1651 aa25.33■■□□□ 1.65
DDX1-201ENST00000233084 EIF4G1Q04637 1599 aaKnown RBP25.26■■□□□ 1.63
DDX1-201ENST00000233084 LOC105371045A0A1W2PR82 267 aa25.18■■□□□ 1.62
DDX1-201ENST00000233084 PEG3Q9GZU2 1588 aa25.17■■□□□ 1.62
DDX1-201ENST00000233084 TRIM26Q12899 539 aaPredicted RBP25.13■■□□□ 1.61
DDX1-201ENST00000233084 ATAD2BQ9ULI0 1458 aa25.07■■□□□ 1.6
DDX1-201ENST00000233084 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
DDX1-201ENST00000233084 TOP2AP11388 1531 aaKnown RBP25.03■■□□□ 1.6
DDX1-201ENST00000233084 CC2D2AQ9P2K1 1620 aa24.95■■□□□ 1.59
DDX1-201ENST00000233084 MYT1Q01538 1121 aa24.92■■□□□ 1.58
DDX1-201ENST00000233084 ZEB1P37275 1124 aaPredicted RBP24.92■■□□□ 1.58
DDX1-201ENST00000233084 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
DDX1-201ENST00000233084 NCAPD3P42695 1498 aa24.89■■□□□ 1.57
DDX1-201ENST00000233084 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
DDX1-201ENST00000233084 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
DDX1-201ENST00000233084 ACIN1Q9UKV3 1341 aaKnown RBP24.7■■□□□ 1.54
DDX1-201ENST00000233084 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
DDX1-201ENST00000233084 GTF3C3Q9Y5Q9 886 aa24.6■■□□□ 1.53
DDX1-201ENST00000233084 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
DDX1-201ENST00000233084 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
DDX1-201ENST00000233084 CFTRP13569 1480 aa24.28■■□□□ 1.48
DDX1-201ENST00000233084 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
DDX1-201ENST00000233084 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
DDX1-201ENST00000233084 CADPSQ9ULU8 1353 aa24.21■■□□□ 1.47
DDX1-201ENST00000233084 DIEXFQ68CQ4 756 aaKnown RBP24.21■■□□□ 1.47
DDX1-201ENST00000233084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.2■■□□□ 1.47
DDX1-201ENST00000233084 FAM9AQ8IZU1 332 aaPredicted RBP24.2■■□□□ 1.46
DDX1-201ENST00000233084 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
DDX1-201ENST00000233084 NESP48681 1621 aa24.13■■□□□ 1.45
DDX1-201ENST00000233084 CCER1Q8TC90 406 aaPredicted RBP24.13■■□□□ 1.45
DDX1-201ENST00000233084 LAMC3Q9Y6N6 1575 aa24.1■■□□□ 1.45
DDX1-201ENST00000233084 TRIM41Q8WV44 630 aa24.04■■□□□ 1.44
DDX1-201ENST00000233084 YTHDC1Q96MU7 727 aaKnown RBP24.02■■□□□ 1.44
DDX1-201ENST00000233084 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
DDX1-201ENST00000233084 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
DDX1-201ENST00000233084 FANCD2Q9BXW9 1451 aa23.96■■□□□ 1.43
DDX1-201ENST00000233084 KIF21AQ7Z4S6 1674 aa23.89■■□□□ 1.42
DDX1-201ENST00000233084 TOP2BQ02880 1626 aa23.89■■□□□ 1.42
DDX1-201ENST00000233084 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.42
DDX1-201ENST00000233084 CUX1P39880 1505 aa23.88■■□□□ 1.41
DDX1-201ENST00000233084 PDS5BQ9NTI5 1447 aa23.87■■□□□ 1.41
DDX1-201ENST00000233084 CEP164Q9UPV0 1460 aa23.83■■□□□ 1.41
DDX1-201ENST00000233084 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
DDX1-201ENST00000233084 URB2Q14146 1524 aaKnown RBP23.71■■□□□ 1.39
DDX1-201ENST00000233084 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.39
DDX1-201ENST00000233084 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
DDX1-201ENST00000233084 SOGA1O94964 1423 aa23.65■■□□□ 1.38
DDX1-201ENST00000233084 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.37
DDX1-201ENST00000233084 ZNF316A6NFI3 1004 aaPredicted RBP23.63■■□□□ 1.37
DDX1-201ENST00000233084 MRC2Q9UBG0 1479 aa23.61■■□□□ 1.37
DDX1-201ENST00000233084 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
DDX1-201ENST00000233084 RUSC2Q8N2Y8 1516 aa23.6■■□□□ 1.37
DDX1-201ENST00000233084 MIER1Q8N108 512 aa23.59■■□□□ 1.37
DDX1-201ENST00000233084 POLA1P09884 1462 aaPredicted RBP23.57■■□□□ 1.36
DDX1-201ENST00000233084 THOC2Q8NI27 1593 aaKnown RBP23.55■■□□□ 1.36
DDX1-201ENST00000233084 BCL11AQ9H165 835 aa23.53■■□□□ 1.36
DDX1-201ENST00000233084 WDR62O43379 1518 aa23.53■■□□□ 1.36
DDX1-201ENST00000233084 EEA1Q15075 1411 aa23.5■■□□□ 1.35
DDX1-201ENST00000233084 RAD54L2Q9Y4B4 1467 aa23.48■■□□□ 1.35
DDX1-201ENST00000233084 WDR97A6NE52 1622 aa23.45■■□□□ 1.34
DDX1-201ENST00000233084 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
DDX1-201ENST00000233084 CUX2O14529 1486 aa23.41■■□□□ 1.34
DDX1-201ENST00000233084 TARBP1Q13395 1621 aaKnown RBP23.4■■□□□ 1.34
DDX1-201ENST00000233084 KIF27Q86VH2 1401 aa23.4■■□□□ 1.34
DDX1-201ENST00000233084 CSRNP3Q8WYN3 585 aa23.39■■□□□ 1.33
DDX1-201ENST00000233084 ANP32EQ9BTT0 268 aa23.39■■□□□ 1.33
DDX1-201ENST00000233084 ABCA5Q8WWZ7 1642 aa23.3■■□□□ 1.32
DDX1-201ENST00000233084 SUPT16HQ9Y5B9 1047 aaKnown RBP23.3■■□□□ 1.32
DDX1-201ENST00000233084 KIF21BO75037 1637 aa23.29■■□□□ 1.32
DDX1-201ENST00000233084 IFT140Q96RY7 1462 aa23.27■■□□□ 1.32
DDX1-201ENST00000233084 TSHZ2Q9NRE2 1034 aa23.25■■□□□ 1.31
DDX1-201ENST00000233084 TDRD9Q8NDG6 1382 aaKnown RBP23.24■■□□□ 1.31
DDX1-201ENST00000233084 IGF1RP08069 1367 aa23.23■■□□□ 1.31
DDX1-201ENST00000233084 PRXQ9BXM0 1461 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms