Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 LINC00115-201ENST00000473798 1317 ntBASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 AL672207.1-201ENST00000328462 1570 ntBASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 FAU-202ENST00000434372 533 ntTSL 2 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 AL135901.1-201ENST00000451812 333 ntBASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRMT13Q9NUP7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRMT13Q9NUP7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRMT13Q9NUP7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 AC006486.2-201ENST00000624246 2199 ntBASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 AL136379.1-201ENST00000623471 2642 ntBASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 AL354702.1-201ENST00000442006 1960 ntBASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 COX20P1-201ENST00000366529 357 ntBASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 PPP1R2P4-201ENST00000424051 595 ntBASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 GRPEL2P1-201ENST00000453145 339 ntBASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 RN7SL375P-201ENST00000492442 298 ntBASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 RN7SL767P-201ENST00000493013 295 ntBASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRMT13Q9NUP7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 BX679664.3-201ENST00000414070 555 ntBASIC15.69■□□□□ 0.1
TRMT13Q9NUP7 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms