RNA–Protein interactions for RNA: ENST00000517501.1

NUDCD2-202, Transcript of NudC domain containing 2, humanhuman

TSL 5 BASIC

Gene NUDCD2, Length 448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD2-202ENST00000517501 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
NUDCD2-202ENST00000517501 CCDC180Q9P1Z9 1646 aa29.64■■■□□ 2.34
NUDCD2-202ENST00000517501 ABCC9O60706 1549 aa29.16■■■□□ 2.26
NUDCD2-202ENST00000517501 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.1
NUDCD2-202ENST00000517501 DCAF8L2P0C7V8 631 aa28.06■■■□□ 2.08
NUDCD2-202ENST00000517501 RB1CC1Q8TDY2 1594 aa27.95■■■□□ 2.07
NUDCD2-202ENST00000517501 NACADO15069 1562 aa27.9■■■□□ 2.06
NUDCD2-202ENST00000517501 ZCCHC6Q5VYS8 1495 aaKnown RBP27.82■■■□□ 2.04
NUDCD2-202ENST00000517501 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
NUDCD2-202ENST00000517501 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
NUDCD2-202ENST00000517501 UNC13AQ9UPW8 1703 aa27.33■■□□□ 1.97
NUDCD2-202ENST00000517501 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.96
NUDCD2-202ENST00000517501 SCRIBQ14160 1630 aa27.16■■□□□ 1.94
NUDCD2-202ENST00000517501 BICRAQ9NZM4 1560 aa27.12■■□□□ 1.93
NUDCD2-202ENST00000517501 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
NUDCD2-202ENST00000517501 DNAJC5Q9H3Z4 198 aa26.45■■□□□ 1.82
NUDCD2-202ENST00000517501 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
NUDCD2-202ENST00000517501 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
NUDCD2-202ENST00000517501 CECR2Q9BXF3 1484 aa26.27■■□□□ 1.8
NUDCD2-202ENST00000517501 SMARCA4P51532 1647 aa25.92■■□□□ 1.74
NUDCD2-202ENST00000517501 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
NUDCD2-202ENST00000517501 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
NUDCD2-202ENST00000517501 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
NUDCD2-202ENST00000517501 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
NUDCD2-202ENST00000517501 SMARCA2P51531 1590 aa25.73■■□□□ 1.71
NUDCD2-202ENST00000517501 PEG3Q9GZU2 1588 aa25.61■■□□□ 1.69
NUDCD2-202ENST00000517501 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
NUDCD2-202ENST00000517501 BAZ1BQ9UIG0 1483 aaKnown RBP25.6■■□□□ 1.69
NUDCD2-202ENST00000517501 WIZO95785 1651 aa25.51■■□□□ 1.67
NUDCD2-202ENST00000517501 RSF1Q96T23 1441 aaPredicted RBP25.47■■□□□ 1.67
NUDCD2-202ENST00000517501 CUX2O14529 1486 aa25.41■■□□□ 1.66
NUDCD2-202ENST00000517501 NESP48681 1621 aa25.23■■□□□ 1.63
NUDCD2-202ENST00000517501 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
NUDCD2-202ENST00000517501 ERCC6Q03468 1493 aa25.12■■□□□ 1.61
NUDCD2-202ENST00000517501 LAMC3Q9Y6N6 1575 aa25.07■■□□□ 1.6
NUDCD2-202ENST00000517501 CADPSQ9ULU8 1353 aa25.04■■□□□ 1.6
NUDCD2-202ENST00000517501 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
NUDCD2-202ENST00000517501 PDS5BQ9NTI5 1447 aa24.93■■□□□ 1.58
NUDCD2-202ENST00000517501 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
NUDCD2-202ENST00000517501 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
NUDCD2-202ENST00000517501 CFTRP13569 1480 aa24.86■■□□□ 1.57
NUDCD2-202ENST00000517501 THOC2Q8NI27 1593 aaKnown RBP24.79■■□□□ 1.56
NUDCD2-202ENST00000517501 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
NUDCD2-202ENST00000517501 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
NUDCD2-202ENST00000517501 TRIM41Q8WV44 630 aa24.7■■□□□ 1.54
NUDCD2-202ENST00000517501 MRC2Q9UBG0 1479 aa24.69■■□□□ 1.54
NUDCD2-202ENST00000517501 PRDM2Q13029 1718 aa24.64■■□□□ 1.53
NUDCD2-202ENST00000517501 WDR62O43379 1518 aa24.59■■□□□ 1.53
NUDCD2-202ENST00000517501 URB2Q14146 1524 aaKnown RBP24.52■■□□□ 1.52
NUDCD2-202ENST00000517501 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
NUDCD2-202ENST00000517501 DNMBPQ6XZF7 1577 aa24.31■■□□□ 1.48
NUDCD2-202ENST00000517501 ABCC8Q09428 1581 aa24.3■■□□□ 1.48
NUDCD2-202ENST00000517501 OSCARQ8IYS5 282 aa24.22■■□□□ 1.47
NUDCD2-202ENST00000517501 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
NUDCD2-202ENST00000517501 CUX1P39880 1505 aa24.18■■□□□ 1.46
NUDCD2-202ENST00000517501 POLA1P09884 1462 aaPredicted RBP24.15■■□□□ 1.46
NUDCD2-202ENST00000517501 ZNF608Q9ULD9 1512 aaPredicted RBP24.14■■□□□ 1.45
NUDCD2-202ENST00000517501 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
NUDCD2-202ENST00000517501 RAD54L2Q9Y4B4 1467 aa24.09■■□□□ 1.45
NUDCD2-202ENST00000517501 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
NUDCD2-202ENST00000517501 SOGA1O94964 1423 aa24.07■■□□□ 1.44
NUDCD2-202ENST00000517501 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
NUDCD2-202ENST00000517501 AQRO60306 1485 aaKnown RBP eCLIP24■■□□□ 1.433e-7■■■■□ 25.3
NUDCD2-202ENST00000517501 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
NUDCD2-202ENST00000517501 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
NUDCD2-202ENST00000517501 TDRD9Q8NDG6 1382 aaKnown RBP23.97■■□□□ 1.43
NUDCD2-202ENST00000517501 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
NUDCD2-202ENST00000517501 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
NUDCD2-202ENST00000517501 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
NUDCD2-202ENST00000517501 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
NUDCD2-202ENST00000517501 GAPVD1Q14C86 1478 aa23.78■■□□□ 1.4
NUDCD2-202ENST00000517501 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
NUDCD2-202ENST00000517501 FBLN2P98095 1184 aa23.77■■□□□ 1.4
NUDCD2-202ENST00000517501 GRIN2BQ13224 1484 aa23.76■■□□□ 1.39
NUDCD2-202ENST00000517501 RIMBP3CA6NJZ7 1639 aa23.75■■□□□ 1.39
NUDCD2-202ENST00000517501 RIMBP3BA6NNM3 1639 aa23.75■■□□□ 1.39
NUDCD2-202ENST00000517501 RIMBP3Q9UFD9 1639 aa23.75■■□□□ 1.39
NUDCD2-202ENST00000517501 ABCA5Q8WWZ7 1642 aa23.74■■□□□ 1.39
NUDCD2-202ENST00000517501 PBRM1Q86U86 1689 aa23.72■■□□□ 1.39
NUDCD2-202ENST00000517501 CHD1O14646 1710 aa23.71■■□□□ 1.39
NUDCD2-202ENST00000517501 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
NUDCD2-202ENST00000517501 ARHGEF11O15085 1522 aa23.67■■□□□ 1.38
NUDCD2-202ENST00000517501 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
NUDCD2-202ENST00000517501 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
NUDCD2-202ENST00000517501 SYNJ2O15056 1496 aa23.61■■□□□ 1.37
NUDCD2-202ENST00000517501 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
NUDCD2-202ENST00000517501 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
NUDCD2-202ENST00000517501 TRHP20396 242 aaPredicted RBP23.53■■□□□ 1.36
NUDCD2-202ENST00000517501 KIF27Q86VH2 1401 aa23.51■■□□□ 1.35
NUDCD2-202ENST00000517501 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
NUDCD2-202ENST00000517501 GRIN2AQ12879 1464 aa23.47■■□□□ 1.35
NUDCD2-202ENST00000517501 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
NUDCD2-202ENST00000517501 IGF1RP08069 1367 aa23.42■■□□□ 1.34
NUDCD2-202ENST00000517501 AEBP2Q6ZN18 517 aaPredicted RBP23.41■■□□□ 1.34
NUDCD2-202ENST00000517501 ARAP1Q96P48 1450 aa23.4■■□□□ 1.34
NUDCD2-202ENST00000517501 CEP170Q5SW79 1584 aa23.36■■□□□ 1.33
NUDCD2-202ENST00000517501 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
NUDCD2-202ENST00000517501 NUP160Q12769 1436 aa23.34■■□□□ 1.33
NUDCD2-202ENST00000517501 CUL7Q14999 1698 aa23.32■■□□□ 1.32
NUDCD2-202ENST00000517501 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms