RNA–Protein interactions for RNA: ENST00000356742.9

HVCN1-202, Transcript of hydrogen voltage gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HVCN1, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-202ENST00000356742 NISCHQ9Y2I1 1504 aa33.1■■■□□ 2.89
HVCN1-202ENST00000356742 CCDC180Q9P1Z9 1646 aa28.56■■■□□ 2.16
HVCN1-202ENST00000356742 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
HVCN1-202ENST00000356742 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
HVCN1-202ENST00000356742 DCAF8L2P0C7V8 631 aa27.28■■□□□ 1.96
HVCN1-202ENST00000356742 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
HVCN1-202ENST00000356742 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
HVCN1-202ENST00000356742 MYO15BQ96JP2 1530 aa26.71■■□□□ 1.87
HVCN1-202ENST00000356742 ABCC9O60706 1549 aa26.65■■□□□ 1.86
HVCN1-202ENST00000356742 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
HVCN1-202ENST00000356742 NACADO15069 1562 aa26.45■■□□□ 1.82
HVCN1-202ENST00000356742 RB1CC1Q8TDY2 1594 aa26.12■■□□□ 1.77
HVCN1-202ENST00000356742 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
HVCN1-202ENST00000356742 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
HVCN1-202ENST00000356742 UNC13AQ9UPW8 1703 aa25.76■■□□□ 1.71
HVCN1-202ENST00000356742 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
HVCN1-202ENST00000356742 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
HVCN1-202ENST00000356742 WIZO95785 1651 aa25.52■■□□□ 1.68
HVCN1-202ENST00000356742 BAZ1AQ9NRL2 1556 aaPredicted RBP25.5■■□□□ 1.67
HVCN1-202ENST00000356742 BICRAQ9NZM4 1560 aa25.4■■□□□ 1.66
HVCN1-202ENST00000356742 SMARCA4P51532 1647 aa25.36■■□□□ 1.65
HVCN1-202ENST00000356742 PABPN1Q86U42 306 aaKnown RBP eCLIP25.27■■□□□ 1.64
HVCN1-202ENST00000356742 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
HVCN1-202ENST00000356742 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
HVCN1-202ENST00000356742 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
HVCN1-202ENST00000356742 SMARCA2P51531 1590 aa24.99■■□□□ 1.59
HVCN1-202ENST00000356742 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
HVCN1-202ENST00000356742 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
HVCN1-202ENST00000356742 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
HVCN1-202ENST00000356742 ATAD2BQ9ULI0 1458 aa24.78■■□□□ 1.56
HVCN1-202ENST00000356742 FAM9AQ8IZU1 332 aaPredicted RBP24.71■■□□□ 1.55
HVCN1-202ENST00000356742 ABCC8Q09428 1581 aa24.71■■□□□ 1.55
HVCN1-202ENST00000356742 BAZ1BQ9UIG0 1483 aaKnown RBP24.68■■□□□ 1.54
HVCN1-202ENST00000356742 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
HVCN1-202ENST00000356742 EHMT2Q96KQ7 1210 aa24.44■■□□□ 1.5
HVCN1-202ENST00000356742 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
HVCN1-202ENST00000356742 PCGF6Q9BYE7 350 aa24.41■■□□□ 1.5
HVCN1-202ENST00000356742 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
HVCN1-202ENST00000356742 SOGA1O94964 1423 aa24.32■■□□□ 1.48
HVCN1-202ENST00000356742 SYNJ1O43426 1573 aa24.32■■□□□ 1.48
HVCN1-202ENST00000356742 EEA1Q15075 1411 aa24.23■■□□□ 1.47
HVCN1-202ENST00000356742 RUSC2Q8N2Y8 1516 aa24.23■■□□□ 1.47
HVCN1-202ENST00000356742 TRIM26Q12899 539 aaPredicted RBP24.16■■□□□ 1.46
HVCN1-202ENST00000356742 TOP2BQ02880 1626 aa24.12■■□□□ 1.45
HVCN1-202ENST00000356742 HRCP23327 699 aa24.11■■□□□ 1.45
HVCN1-202ENST00000356742 CSRNP3Q8WYN3 585 aa24.11■■□□□ 1.45
HVCN1-202ENST00000356742 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
HVCN1-202ENST00000356742 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
HVCN1-202ENST00000356742 CFTRP13569 1480 aa24.06■■□□□ 1.44
HVCN1-202ENST00000356742 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
HVCN1-202ENST00000356742 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
HVCN1-202ENST00000356742 CEP162Q5TB80 1403 aa24■■□□□ 1.43
HVCN1-202ENST00000356742 GOLGA3Q08378 1498 aa24■■□□□ 1.43
HVCN1-202ENST00000356742 KIF21BO75037 1637 aa23.97■■□□□ 1.43
HVCN1-202ENST00000356742 CUX1P39880 1505 aa23.95■■□□□ 1.42
HVCN1-202ENST00000356742 CEP164Q9UPV0 1460 aa23.93■■□□□ 1.42
HVCN1-202ENST00000356742 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
HVCN1-202ENST00000356742 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
HVCN1-202ENST00000356742 PPARGC1BQ86YN6 1023 aaKnown RBP23.82■■□□□ 1.4
HVCN1-202ENST00000356742 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
HVCN1-202ENST00000356742 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
HVCN1-202ENST00000356742 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
HVCN1-202ENST00000356742 PRXQ9BXM0 1461 aa23.67■■□□□ 1.38
HVCN1-202ENST00000356742 CLIP1P30622 1438 aa23.66■■□□□ 1.38
HVCN1-202ENST00000356742 FANCD2Q9BXW9 1451 aa23.64■■□□□ 1.38
HVCN1-202ENST00000356742 NESP48681 1621 aa23.6■■□□□ 1.37
HVCN1-202ENST00000356742 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
HVCN1-202ENST00000356742 TTBK1Q5TCY1 1321 aaPredicted RBP23.54■■□□□ 1.36
HVCN1-202ENST00000356742 CUX2O14529 1486 aa23.54■■□□□ 1.36
HVCN1-202ENST00000356742 VPS8Q8N3P4 1428 aa23.52■■□□□ 1.36
HVCN1-202ENST00000356742 DNMBPQ6XZF7 1577 aa23.51■■□□□ 1.35
HVCN1-202ENST00000356742 LAMC3Q9Y6N6 1575 aa23.51■■□□□ 1.35
HVCN1-202ENST00000356742 RANGAP1P46060 587 aaPredicted RBP23.48■■□□□ 1.35
HVCN1-202ENST00000356742 TOPBP1Q92547 1522 aa23.45■■□□□ 1.34
HVCN1-202ENST00000356742 IGF1RP08069 1367 aa23.43■■□□□ 1.34
HVCN1-202ENST00000356742 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
HVCN1-202ENST00000356742 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
HVCN1-202ENST00000356742 POLA1P09884 1462 aaPredicted RBP23.39■■□□□ 1.33
HVCN1-202ENST00000356742 ARAP1Q96P48 1450 aa23.39■■□□□ 1.33
HVCN1-202ENST00000356742 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
HVCN1-202ENST00000356742 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
HVCN1-202ENST00000356742 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
HVCN1-202ENST00000356742 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
HVCN1-202ENST00000356742 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
HVCN1-202ENST00000356742 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
HVCN1-202ENST00000356742 WDR97A6NE52 1622 aa23.27■■□□□ 1.32
HVCN1-202ENST00000356742 ARHGAP35Q9NRY4 1499 aa23.27■■□□□ 1.32
HVCN1-202ENST00000356742 APLP2Q06481 763 aa23.27■■□□□ 1.32
HVCN1-202ENST00000356742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
HVCN1-202ENST00000356742 CUL7Q14999 1698 aa23.19■■□□□ 1.3
HVCN1-202ENST00000356742 CCER1Q8TC90 406 aaPredicted RBP23.16■■□□□ 1.3
HVCN1-202ENST00000356742 ABCA5Q8WWZ7 1642 aa23.15■■□□□ 1.3
HVCN1-202ENST00000356742 TDRD9Q8NDG6 1382 aaKnown RBP23.07■■□□□ 1.28
HVCN1-202ENST00000356742 CTTNBP2Q8WZ74 1663 aa23.07■■□□□ 1.28
HVCN1-202ENST00000356742 TARBP1Q13395 1621 aaKnown RBP23.06■■□□□ 1.28
HVCN1-202ENST00000356742 KANK4Q5T7N3 995 aaPredicted RBP23.06■■□□□ 1.28
HVCN1-202ENST00000356742 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
HVCN1-202ENST00000356742 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
HVCN1-202ENST00000356742 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
HVCN1-202ENST00000356742 EFCAB5A4FU69 1503 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms