RNA–Protein interactions for RNA: ENST00000373622.9

RPN2-202, Transcript of ribophorin II, humanhuman

TSL 2 BASIC

Gene RPN2, Length 2,348 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN2-202ENST00000373622 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
RPN2-202ENST00000373622 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
RPN2-202ENST00000373622 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
RPN2-202ENST00000373622 DCAF8L2P0C7V8 631 aa27.61■■■□□ 2.01
RPN2-202ENST00000373622 ABCC9O60706 1549 aa27.45■■□□□ 1.98
RPN2-202ENST00000373622 DCAF1Q9Y4B6 1507 aa27.14■■□□□ 1.93
RPN2-202ENST00000373622 SHROOM4Q9ULL8 1493 aa27.1■■□□□ 1.93
RPN2-202ENST00000373622 MYO15BQ96JP2 1530 aa26.83■■□□□ 1.89
RPN2-202ENST00000373622 NACADO15069 1562 aa26.76■■□□□ 1.88
RPN2-202ENST00000373622 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
RPN2-202ENST00000373622 SCRIBQ14160 1630 aa26.5■■□□□ 1.83
RPN2-202ENST00000373622 SUPT5HO00267 1087 aaKnown RBP26.06■■□□□ 1.76
RPN2-202ENST00000373622 UNC13AQ9UPW8 1703 aa26.01■■□□□ 1.75
RPN2-202ENST00000373622 PABPN1Q86U42 306 aaKnown RBP eCLIP26■■□□□ 1.75
RPN2-202ENST00000373622 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
RPN2-202ENST00000373622 CECR2Q9BXF3 1484 aa25.75■■□□□ 1.71
RPN2-202ENST00000373622 RSF1Q96T23 1441 aaPredicted RBP25.62■■□□□ 1.69
RPN2-202ENST00000373622 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
RPN2-202ENST00000373622 BAZ1AQ9NRL2 1556 aaPredicted RBP25.42■■□□□ 1.66
RPN2-202ENST00000373622 SMARCA4P51532 1647 aa25.33■■□□□ 1.64
RPN2-202ENST00000373622 WIZO95785 1651 aa25.3■■□□□ 1.64
RPN2-202ENST00000373622 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
RPN2-202ENST00000373622 ATAD2BQ9ULI0 1458 aa25.01■■□□□ 1.59
RPN2-202ENST00000373622 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
RPN2-202ENST00000373622 TOP2AP11388 1531 aaKnown RBP24.94■■□□□ 1.58
RPN2-202ENST00000373622 SMARCA2P51531 1590 aa24.9■■□□□ 1.58
RPN2-202ENST00000373622 BAZ1BQ9UIG0 1483 aaKnown RBP24.85■■□□□ 1.57
RPN2-202ENST00000373622 CHIC1Q5VXU3 224 aa24.81■■□□□ 1.56
RPN2-202ENST00000373622 CCDC88BA6NC98 1476 aa24.81■■□□□ 1.56
RPN2-202ENST00000373622 NCAPD3P42695 1498 aa24.78■■□□□ 1.56
RPN2-202ENST00000373622 CC2D2AQ9P2K1 1620 aa24.73■■□□□ 1.55
RPN2-202ENST00000373622 HMGXB3Q12766 1538 aa24.64■■□□□ 1.53
RPN2-202ENST00000373622 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
RPN2-202ENST00000373622 TRIM41Q8WV44 630 aa24.43■■□□□ 1.5
RPN2-202ENST00000373622 ABCC8Q09428 1581 aa24.27■■□□□ 1.48
RPN2-202ENST00000373622 CFTRP13569 1480 aa24.22■■□□□ 1.47
RPN2-202ENST00000373622 CADPSQ9ULU8 1353 aa24.2■■□□□ 1.46
RPN2-202ENST00000373622 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
RPN2-202ENST00000373622 FAM9AQ8IZU1 332 aaPredicted RBP24.1■■□□□ 1.45
RPN2-202ENST00000373622 NESP48681 1621 aa24.07■■□□□ 1.44
RPN2-202ENST00000373622 LOC105371045A0A1W2PR82 267 aa23.98■■□□□ 1.43
RPN2-202ENST00000373622 SYNJ1O43426 1573 aa23.97■■□□□ 1.43
RPN2-202ENST00000373622 FANCD2Q9BXW9 1451 aa23.91■■□□□ 1.42
RPN2-202ENST00000373622 LAMC3Q9Y6N6 1575 aa23.87■■□□□ 1.41
RPN2-202ENST00000373622 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
RPN2-202ENST00000373622 SOGA1O94964 1423 aa23.86■■□□□ 1.41
RPN2-202ENST00000373622 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
RPN2-202ENST00000373622 CUX1P39880 1505 aa23.85■■□□□ 1.41
RPN2-202ENST00000373622 TOP2BQ02880 1626 aa23.82■■□□□ 1.4
RPN2-202ENST00000373622 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
RPN2-202ENST00000373622 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
RPN2-202ENST00000373622 BIVM-ERCC5R4GMW8 1640 aa23.74■■□□□ 1.39
RPN2-202ENST00000373622 CEP164Q9UPV0 1460 aa23.73■■□□□ 1.39
RPN2-202ENST00000373622 CSRNP3Q8WYN3 585 aa23.68■■□□□ 1.38
RPN2-202ENST00000373622 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
RPN2-202ENST00000373622 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
RPN2-202ENST00000373622 URB2Q14146 1524 aaKnown RBP23.62■■□□□ 1.37
RPN2-202ENST00000373622 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
RPN2-202ENST00000373622 EEA1Q15075 1411 aa23.6■■□□□ 1.37
RPN2-202ENST00000373622 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
RPN2-202ENST00000373622 POLA1P09884 1462 aaPredicted RBP23.52■■□□□ 1.36
RPN2-202ENST00000373622 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
RPN2-202ENST00000373622 ERCC6Q03468 1493 aa23.5■■□□□ 1.35
RPN2-202ENST00000373622 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
RPN2-202ENST00000373622 CUX2O14529 1486 aa23.48■■□□□ 1.35
RPN2-202ENST00000373622 MRC2Q9UBG0 1479 aa23.46■■□□□ 1.35
RPN2-202ENST00000373622 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.35
RPN2-202ENST00000373622 UBTFP17480 764 aaKnown RBP23.44■■□□□ 1.34
RPN2-202ENST00000373622 HRCP23327 699 aa23.41■■□□□ 1.34
RPN2-202ENST00000373622 IGF1RP08069 1367 aa23.37■■□□□ 1.33
RPN2-202ENST00000373622 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
RPN2-202ENST00000373622 TDRD9Q8NDG6 1382 aaKnown RBP23.35■■□□□ 1.33
RPN2-202ENST00000373622 RAPGEF2Q9Y4G8 1499 aa23.33■■□□□ 1.33
RPN2-202ENST00000373622 GOLGA3Q08378 1498 aa23.33■■□□□ 1.32
RPN2-202ENST00000373622 WDR62O43379 1518 aa23.3■■□□□ 1.32
RPN2-202ENST00000373622 PRXQ9BXM0 1461 aa23.29■■□□□ 1.32
RPN2-202ENST00000373622 TNIKQ9UKE5 1360 aa23.28■■□□□ 1.32
RPN2-202ENST00000373622 KIF21BO75037 1637 aa23.27■■□□□ 1.32
RPN2-202ENST00000373622 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
RPN2-202ENST00000373622 CARMIL1Q5VZK9 1371 aa23.23■■□□□ 1.31
RPN2-202ENST00000373622 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
RPN2-202ENST00000373622 RANGAP1P46060 587 aaPredicted RBP23.21■■□□□ 1.31
RPN2-202ENST00000373622 AQRO60306 1485 aaKnown RBP eCLIP23.19■■□□□ 1.31e-6■■■■■ 47.6
RPN2-202ENST00000373622 GAPVD1Q14C86 1478 aa23.19■■□□□ 1.3
RPN2-202ENST00000373622 WDR97A6NE52 1622 aa23.18■■□□□ 1.3
RPN2-202ENST00000373622 CEP162Q5TB80 1403 aa23.17■■□□□ 1.3
RPN2-202ENST00000373622 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
RPN2-202ENST00000373622 ERICH3Q5RHP9 1530 aa23.14■■□□□ 1.3
RPN2-202ENST00000373622 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
RPN2-202ENST00000373622 ABCA5Q8WWZ7 1642 aa23.12■■□□□ 1.29
RPN2-202ENST00000373622 CLIP1P30622 1438 aa23.02■■□□□ 1.28
RPN2-202ENST00000373622 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
RPN2-202ENST00000373622 CUL7Q14999 1698 aa22.98■■□□□ 1.27
RPN2-202ENST00000373622 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
RPN2-202ENST00000373622 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
RPN2-202ENST00000373622 PPARGC1BQ86YN6 1023 aaKnown RBP22.93■■□□□ 1.26
RPN2-202ENST00000373622 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
RPN2-202ENST00000373622 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
RPN2-202ENST00000373622 FBLN2P98095 1184 aa22.86■■□□□ 1.25
RPN2-202ENST00000373622 ADAMTS12P58397 1594 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms