RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 NISCHQ9Y2I1 1504 aa33.45■■■□□ 2.95
HMGCLL1-208ENST00000508459 AEBP2Q6ZN18 517 aaPredicted RBP29.77■■■□□ 2.36
HMGCLL1-208ENST00000508459 CCDC180Q9P1Z9 1646 aa29.59■■■□□ 2.33
HMGCLL1-208ENST00000508459 ABCC9O60706 1549 aa28.02■■■□□ 2.08
HMGCLL1-208ENST00000508459 ZCCHC6Q5VYS8 1495 aaKnown RBP28.01■■■□□ 2.07
HMGCLL1-208ENST00000508459 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
HMGCLL1-208ENST00000508459 CHIC1Q5VXU3 224 aa27.87■■■□□ 2.05
HMGCLL1-208ENST00000508459 MYO15BQ96JP2 1530 aa27.78■■■□□ 2.04
HMGCLL1-208ENST00000508459 NACADO15069 1562 aa27.65■■■□□ 2.02
HMGCLL1-208ENST00000508459 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
HMGCLL1-208ENST00000508459 RB1CC1Q8TDY2 1594 aa27.5■■□□□ 1.99
HMGCLL1-208ENST00000508459 SCRIBQ14160 1630 aa26.82■■□□□ 1.88
HMGCLL1-208ENST00000508459 UNC13AQ9UPW8 1703 aa26.66■■□□□ 1.86
HMGCLL1-208ENST00000508459 SHROOM4Q9ULL8 1493 aa26.6■■□□□ 1.85
HMGCLL1-208ENST00000508459 BICRAQ9NZM4 1560 aa26.4■■□□□ 1.82
HMGCLL1-208ENST00000508459 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
HMGCLL1-208ENST00000508459 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
HMGCLL1-208ENST00000508459 SMARCA4P51532 1647 aa25.8■■□□□ 1.72
HMGCLL1-208ENST00000508459 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
HMGCLL1-208ENST00000508459 EIF4G1Q04637 1599 aaKnown RBP25.75■■□□□ 1.71
HMGCLL1-208ENST00000508459 RSF1Q96T23 1441 aaPredicted RBP25.68■■□□□ 1.7
HMGCLL1-208ENST00000508459 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
HMGCLL1-208ENST00000508459 SMARCA2P51531 1590 aa25.64■■□□□ 1.69
HMGCLL1-208ENST00000508459 PEG3Q9GZU2 1588 aa25.63■■□□□ 1.69
HMGCLL1-208ENST00000508459 SENP3Q9H4L4 574 aaPredicted RBP25.53■■□□□ 1.68
HMGCLL1-208ENST00000508459 SUPT5HO00267 1087 aaKnown RBP25.48■■□□□ 1.67
HMGCLL1-208ENST00000508459 ATAD2BQ9ULI0 1458 aa25.47■■□□□ 1.67
HMGCLL1-208ENST00000508459 CC2D2AQ9P2K1 1620 aa25.44■■□□□ 1.66
HMGCLL1-208ENST00000508459 NCAPD3P42695 1498 aa25.43■■□□□ 1.66
HMGCLL1-208ENST00000508459 WIZO95785 1651 aa25.42■■□□□ 1.66
HMGCLL1-208ENST00000508459 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
HMGCLL1-208ENST00000508459 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
HMGCLL1-208ENST00000508459 TOP2AP11388 1531 aaKnown RBP25.35■■□□□ 1.65
HMGCLL1-208ENST00000508459 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
HMGCLL1-208ENST00000508459 PHF23Q9BUL5 403 aaPredicted RBP25.1■■□□□ 1.61
HMGCLL1-208ENST00000508459 CCDC88BA6NC98 1476 aa24.95■■□□□ 1.58
HMGCLL1-208ENST00000508459 LAMC3Q9Y6N6 1575 aa24.71■■□□□ 1.55
HMGCLL1-208ENST00000508459 CADPSQ9ULU8 1353 aa24.71■■□□□ 1.55
HMGCLL1-208ENST00000508459 CFTRP13569 1480 aa24.7■■□□□ 1.55
HMGCLL1-208ENST00000508459 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
HMGCLL1-208ENST00000508459 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
HMGCLL1-208ENST00000508459 FANCD2Q9BXW9 1451 aa24.39■■□□□ 1.5
HMGCLL1-208ENST00000508459 NESP48681 1621 aa24.37■■□□□ 1.49
HMGCLL1-208ENST00000508459 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
HMGCLL1-208ENST00000508459 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
HMGCLL1-208ENST00000508459 WRNQ14191 1432 aaPredicted RBP eCLIP24.28■■□□□ 1.48
HMGCLL1-208ENST00000508459 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
HMGCLL1-208ENST00000508459 KIF21AQ7Z4S6 1674 aa24.21■■□□□ 1.47
HMGCLL1-208ENST00000508459 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
HMGCLL1-208ENST00000508459 MRC2Q9UBG0 1479 aa24.17■■□□□ 1.46
HMGCLL1-208ENST00000508459 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
HMGCLL1-208ENST00000508459 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
HMGCLL1-208ENST00000508459 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
HMGCLL1-208ENST00000508459 CUX1P39880 1505 aa24.06■■□□□ 1.44
HMGCLL1-208ENST00000508459 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
HMGCLL1-208ENST00000508459 SYNJ1O43426 1573 aa24.05■■□□□ 1.44
HMGCLL1-208ENST00000508459 WDR62O43379 1518 aa24.05■■□□□ 1.44
HMGCLL1-208ENST00000508459 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
HMGCLL1-208ENST00000508459 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
HMGCLL1-208ENST00000508459 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
HMGCLL1-208ENST00000508459 EEA1Q15075 1411 aa23.93■■□□□ 1.42
HMGCLL1-208ENST00000508459 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
HMGCLL1-208ENST00000508459 WDR97A6NE52 1622 aa23.86■■□□□ 1.41
HMGCLL1-208ENST00000508459 SOGA1O94964 1423 aa23.85■■□□□ 1.41
HMGCLL1-208ENST00000508459 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
HMGCLL1-208ENST00000508459 FOXD1Q16676 465 aa23.84■■□□□ 1.41
HMGCLL1-208ENST00000508459 CUX2O14529 1486 aa23.83■■□□□ 1.41
HMGCLL1-208ENST00000508459 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
HMGCLL1-208ENST00000508459 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
HMGCLL1-208ENST00000508459 TARBP1Q13395 1621 aaKnown RBP23.73■■□□□ 1.39
HMGCLL1-208ENST00000508459 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
HMGCLL1-208ENST00000508459 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
HMGCLL1-208ENST00000508459 GAPVD1Q14C86 1478 aa23.61■■□□□ 1.37
HMGCLL1-208ENST00000508459 ERICH3Q5RHP9 1530 aa23.6■■□□□ 1.37
HMGCLL1-208ENST00000508459 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
HMGCLL1-208ENST00000508459 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
HMGCLL1-208ENST00000508459 CUL7Q14999 1698 aa23.54■■□□□ 1.36
HMGCLL1-208ENST00000508459 TDRD9Q8NDG6 1382 aaKnown RBP23.52■■□□□ 1.36
HMGCLL1-208ENST00000508459 EIF4G3O43432 1585 aaKnown RBP23.51■■□□□ 1.35
HMGCLL1-208ENST00000508459 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
HMGCLL1-208ENST00000508459 IGF1RP08069 1367 aa23.48■■□□□ 1.35
HMGCLL1-208ENST00000508459 KIF21BO75037 1637 aa23.47■■□□□ 1.35
HMGCLL1-208ENST00000508459 MAGI1Q96QZ7 1491 aaPredicted RBP23.46■■□□□ 1.35
HMGCLL1-208ENST00000508459 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
HMGCLL1-208ENST00000508459 FAM9AQ8IZU1 332 aaPredicted RBP23.45■■□□□ 1.34
HMGCLL1-208ENST00000508459 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
HMGCLL1-208ENST00000508459 AQRO60306 1485 aaKnown RBP eCLIP23.44■■□□□ 1.34
HMGCLL1-208ENST00000508459 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
HMGCLL1-208ENST00000508459 CARMIL1Q5VZK9 1371 aa23.41■■□□□ 1.34
HMGCLL1-208ENST00000508459 GOLGA3Q08378 1498 aa23.4■■□□□ 1.34
HMGCLL1-208ENST00000508459 FHAD1B1AJZ9 1412 aa23.4■■□□□ 1.34
HMGCLL1-208ENST00000508459 RAPGEF2Q9Y4G8 1499 aa23.39■■□□□ 1.34
HMGCLL1-208ENST00000508459 ADAMTS12P58397 1594 aa23.34■■□□□ 1.33
HMGCLL1-208ENST00000508459 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
HMGCLL1-208ENST00000508459 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
HMGCLL1-208ENST00000508459 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
HMGCLL1-208ENST00000508459 UBTFP17480 764 aaKnown RBP23.23■■□□□ 1.31
HMGCLL1-208ENST00000508459 TNIKQ9UKE5 1360 aa23.22■■□□□ 1.31
HMGCLL1-208ENST00000508459 GRIN2AQ12879 1464 aa23.19■■□□□ 1.3
HMGCLL1-208ENST00000508459 CTTNBP2Q8WZ74 1663 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms