RNA–Protein interactions for RNA: ENST00000375320.5

APOA1-203, Transcript of apolipoprotein A1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene APOA1, Length 940 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-203ENST00000375320 NISCHQ9Y2I1 1504 aa33.77■■■■□ 3
APOA1-203ENST00000375320 CCDC180Q9P1Z9 1646 aa30.27■■■□□ 2.44
APOA1-203ENST00000375320 ABCC9O60706 1549 aa29.61■■■□□ 2.33
APOA1-203ENST00000375320 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
APOA1-203ENST00000375320 NACADO15069 1562 aa28.36■■■□□ 2.13
APOA1-203ENST00000375320 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
APOA1-203ENST00000375320 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
APOA1-203ENST00000375320 DCAF8L2P0C7V8 631 aa28.05■■■□□ 2.08
APOA1-203ENST00000375320 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
APOA1-203ENST00000375320 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
APOA1-203ENST00000375320 BICRAQ9NZM4 1560 aa27.63■■■□□ 2.01
APOA1-203ENST00000375320 SCRIBQ14160 1630 aa27.56■■■□□ 2
APOA1-203ENST00000375320 PABPN1Q86U42 306 aaKnown RBP eCLIP27.5■■□□□ 1.99
APOA1-203ENST00000375320 SHROOM4Q9ULL8 1493 aa27.31■■□□□ 1.96
APOA1-203ENST00000375320 DNAJC5BQ9UF47 199 aa27.15■■□□□ 1.94
APOA1-203ENST00000375320 EIF4G1Q04637 1599 aaKnown RBP26.91■■□□□ 1.9
APOA1-203ENST00000375320 CC2D2AQ9P2K1 1620 aa26.84■■□□□ 1.89
APOA1-203ENST00000375320 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
APOA1-203ENST00000375320 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
APOA1-203ENST00000375320 BAZ1AQ9NRL2 1556 aaPredicted RBP26.22■■□□□ 1.79
APOA1-203ENST00000375320 SMARCA2P51531 1590 aa26.13■■□□□ 1.77
APOA1-203ENST00000375320 ATAD2BQ9ULI0 1458 aa26.11■■□□□ 1.77
APOA1-203ENST00000375320 NCAPD3P42695 1498 aa26.08■■□□□ 1.77
APOA1-203ENST00000375320 HMGXB3Q12766 1538 aa26.08■■□□□ 1.77
APOA1-203ENST00000375320 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
APOA1-203ENST00000375320 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
APOA1-203ENST00000375320 BAZ1BQ9UIG0 1483 aaKnown RBP25.93■■□□□ 1.74
APOA1-203ENST00000375320 WIZO95785 1651 aa25.82■■□□□ 1.72
APOA1-203ENST00000375320 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
APOA1-203ENST00000375320 NESP48681 1621 aa25.59■■□□□ 1.69
APOA1-203ENST00000375320 ERCC6Q03468 1493 aa25.54■■□□□ 1.68
APOA1-203ENST00000375320 LAMC3Q9Y6N6 1575 aa25.54■■□□□ 1.68
APOA1-203ENST00000375320 TOP2AP11388 1531 aaKnown RBP25.52■■□□□ 1.68
APOA1-203ENST00000375320 KIF21AQ7Z4S6 1674 aa25.44■■□□□ 1.66
APOA1-203ENST00000375320 THOC2Q8NI27 1593 aaKnown RBP25.37■■□□□ 1.65
APOA1-203ENST00000375320 CUX2O14529 1486 aa25.34■■□□□ 1.65
APOA1-203ENST00000375320 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
APOA1-203ENST00000375320 PRDM2Q13029 1718 aa25.26■■□□□ 1.63
APOA1-203ENST00000375320 PDS5BQ9NTI5 1447 aa25.25■■□□□ 1.63
APOA1-203ENST00000375320 CFTRP13569 1480 aa25.15■■□□□ 1.62
APOA1-203ENST00000375320 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
APOA1-203ENST00000375320 CEP164Q9UPV0 1460 aa25.1■■□□□ 1.61
APOA1-203ENST00000375320 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
APOA1-203ENST00000375320 FANCD2Q9BXW9 1451 aa25.08■■□□□ 1.6
APOA1-203ENST00000375320 WDR62O43379 1518 aa25.07■■□□□ 1.6
APOA1-203ENST00000375320 URB2Q14146 1524 aaKnown RBP24.86■■□□□ 1.57
APOA1-203ENST00000375320 SUPT5HO00267 1087 aaKnown RBP24.72■■□□□ 1.55
APOA1-203ENST00000375320 DNMBPQ6XZF7 1577 aa24.7■■□□□ 1.54
APOA1-203ENST00000375320 TOPBP1Q92547 1522 aa24.68■■□□□ 1.54
APOA1-203ENST00000375320 ABCC8Q09428 1581 aa24.61■■□□□ 1.53
APOA1-203ENST00000375320 DNAJC5Q9H3Z4 198 aa24.56■■□□□ 1.52
APOA1-203ENST00000375320 IFT140Q96RY7 1462 aa24.54■■□□□ 1.52
APOA1-203ENST00000375320 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
APOA1-203ENST00000375320 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
APOA1-203ENST00000375320 ZNF608Q9ULD9 1512 aaPredicted RBP24.46■■□□□ 1.51
APOA1-203ENST00000375320 POLA1P09884 1462 aaPredicted RBP24.46■■□□□ 1.51
APOA1-203ENST00000375320 CUX1P39880 1505 aa24.45■■□□□ 1.51
APOA1-203ENST00000375320 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
APOA1-203ENST00000375320 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
APOA1-203ENST00000375320 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
APOA1-203ENST00000375320 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
APOA1-203ENST00000375320 CHD1O14646 1710 aa24.27■■□□□ 1.48
APOA1-203ENST00000375320 SOGA1O94964 1423 aa24.26■■□□□ 1.47
APOA1-203ENST00000375320 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
APOA1-203ENST00000375320 TOP2BQ02880 1626 aa24.24■■□□□ 1.47
APOA1-203ENST00000375320 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.471e-12■■■■■ 43.8
APOA1-203ENST00000375320 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
APOA1-203ENST00000375320 WRNQ14191 1432 aaPredicted RBP eCLIP24.17■■□□□ 1.46
APOA1-203ENST00000375320 ABCA5Q8WWZ7 1642 aa24.16■■□□□ 1.46
APOA1-203ENST00000375320 TDRD9Q8NDG6 1382 aaKnown RBP24.14■■□□□ 1.45
APOA1-203ENST00000375320 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
APOA1-203ENST00000375320 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
APOA1-203ENST00000375320 GRIN2BQ13224 1484 aa24.07■■□□□ 1.44
APOA1-203ENST00000375320 OSCARQ8IYS5 282 aa24.05■■□□□ 1.44
APOA1-203ENST00000375320 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
APOA1-203ENST00000375320 GAPVD1Q14C86 1478 aa24.03■■□□□ 1.44
APOA1-203ENST00000375320 RIMBP3CA6NJZ7 1639 aa23.97■■□□□ 1.43
APOA1-203ENST00000375320 RIMBP3BA6NNM3 1639 aa23.97■■□□□ 1.43
APOA1-203ENST00000375320 RIMBP3Q9UFD9 1639 aa23.97■■□□□ 1.43
APOA1-203ENST00000375320 ADAMTS12P58397 1594 aa23.95■■□□□ 1.42
APOA1-203ENST00000375320 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
APOA1-203ENST00000375320 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
APOA1-203ENST00000375320 FBLN2P98095 1184 aa23.89■■□□□ 1.41
APOA1-203ENST00000375320 ARHGEF11O15085 1522 aa23.89■■□□□ 1.41
APOA1-203ENST00000375320 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
APOA1-203ENST00000375320 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
APOA1-203ENST00000375320 GRIN2AQ12879 1464 aa23.78■■□□□ 1.4
APOA1-203ENST00000375320 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
APOA1-203ENST00000375320 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
APOA1-203ENST00000375320 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
APOA1-203ENST00000375320 CUL7Q14999 1698 aa23.7■■□□□ 1.39
APOA1-203ENST00000375320 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
APOA1-203ENST00000375320 NUP160Q12769 1436 aa23.66■■□□□ 1.38
APOA1-203ENST00000375320 KIF27Q86VH2 1401 aa23.65■■□□□ 1.38
APOA1-203ENST00000375320 RUSC2Q8N2Y8 1516 aa23.62■■□□□ 1.37
APOA1-203ENST00000375320 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
APOA1-203ENST00000375320 ERCC6L2Q5T890 1561 aa23.54■■□□□ 1.36
APOA1-203ENST00000375320 IGF1RP08069 1367 aa23.5■■□□□ 1.35
APOA1-203ENST00000375320 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
APOA1-203ENST00000375320 CARMIL1Q5VZK9 1371 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms