RNA–Protein interactions for RNA: ENST00000430350.2

PRNP-203, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,539 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-203ENST00000430350 NISCHQ9Y2I1 1504 aa33.23■■■□□ 2.91
PRNP-203ENST00000430350 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
PRNP-203ENST00000430350 ZCCHC6Q5VYS8 1495 aaKnown RBP27.94■■■□□ 2.06
PRNP-203ENST00000430350 DCAF1Q9Y4B6 1507 aa27.48■■□□□ 1.99
PRNP-203ENST00000430350 DCAF8L2P0C7V8 631 aa27.43■■□□□ 1.98
PRNP-203ENST00000430350 ABCC9O60706 1549 aa27.25■■□□□ 1.95
PRNP-203ENST00000430350 SHROOM4Q9ULL8 1493 aa27.2■■□□□ 1.94
PRNP-203ENST00000430350 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
PRNP-203ENST00000430350 NACADO15069 1562 aa26.91■■□□□ 1.9
PRNP-203ENST00000430350 RB1CC1Q8TDY2 1594 aa26.65■■□□□ 1.86
PRNP-203ENST00000430350 SCRIBQ14160 1630 aa26.6■■□□□ 1.85
PRNP-203ENST00000430350 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
PRNP-203ENST00000430350 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
PRNP-203ENST00000430350 BICRAQ9NZM4 1560 aa25.84■■□□□ 1.73
PRNP-203ENST00000430350 RSF1Q96T23 1441 aaPredicted RBP25.83■■□□□ 1.73
PRNP-203ENST00000430350 CECR2Q9BXF3 1484 aa25.81■■□□□ 1.72
PRNP-203ENST00000430350 PABPN1Q86U42 306 aaKnown RBP eCLIP25.73■■□□□ 1.71
PRNP-203ENST00000430350 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
PRNP-203ENST00000430350 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
PRNP-203ENST00000430350 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
PRNP-203ENST00000430350 WIZO95785 1651 aa25.47■■□□□ 1.67
PRNP-203ENST00000430350 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
PRNP-203ENST00000430350 PEG3Q9GZU2 1588 aa25.2■■□□□ 1.62
PRNP-203ENST00000430350 CHIC1Q5VXU3 224 aa25.18■■□□□ 1.62
PRNP-203ENST00000430350 ATAD2BQ9ULI0 1458 aa25.08■■□□□ 1.6
PRNP-203ENST00000430350 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
PRNP-203ENST00000430350 EIF4G1Q04637 1599 aaKnown RBP25.06■■□□□ 1.6
PRNP-203ENST00000430350 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
PRNP-203ENST00000430350 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
PRNP-203ENST00000430350 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
PRNP-203ENST00000430350 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
PRNP-203ENST00000430350 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
PRNP-203ENST00000430350 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
PRNP-203ENST00000430350 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
PRNP-203ENST00000430350 CFTRP13569 1480 aa24.33■■□□□ 1.49
PRNP-203ENST00000430350 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
PRNP-203ENST00000430350 CADPSQ9ULU8 1353 aa24.23■■□□□ 1.47
PRNP-203ENST00000430350 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
PRNP-203ENST00000430350 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
PRNP-203ENST00000430350 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
PRNP-203ENST00000430350 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
PRNP-203ENST00000430350 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
PRNP-203ENST00000430350 BIVM-ERCC5R4GMW8 1640 aa24.06■■□□□ 1.44
PRNP-203ENST00000430350 SOGA1O94964 1423 aa24.04■■□□□ 1.44
PRNP-203ENST00000430350 HRCP23327 699 aa24.04■■□□□ 1.44
PRNP-203ENST00000430350 EEA1Q15075 1411 aa24.04■■□□□ 1.44
PRNP-203ENST00000430350 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
PRNP-203ENST00000430350 CUX1P39880 1505 aa24■■□□□ 1.43
PRNP-203ENST00000430350 LAMC3Q9Y6N6 1575 aa23.97■■□□□ 1.43
PRNP-203ENST00000430350 NESP48681 1621 aa23.96■■□□□ 1.43
PRNP-203ENST00000430350 FANCD2Q9BXW9 1451 aa23.95■■□□□ 1.42
PRNP-203ENST00000430350 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
PRNP-203ENST00000430350 CSRNP3Q8WYN3 585 aa23.9■■□□□ 1.42
PRNP-203ENST00000430350 EHMT2Q96KQ7 1210 aa23.86■■□□□ 1.41
PRNP-203ENST00000430350 PDS5BQ9NTI5 1447 aa23.8■■□□□ 1.4
PRNP-203ENST00000430350 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
PRNP-203ENST00000430350 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
PRNP-203ENST00000430350 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
PRNP-203ENST00000430350 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
PRNP-203ENST00000430350 TOPBP1Q92547 1522 aa23.7■■□□□ 1.38
PRNP-203ENST00000430350 KIF21BO75037 1637 aa23.7■■□□□ 1.38
PRNP-203ENST00000430350 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
PRNP-203ENST00000430350 TNIKQ9UKE5 1360 aa23.65■■□□□ 1.38
PRNP-203ENST00000430350 KIF21AQ7Z4S6 1674 aa23.65■■□□□ 1.38
PRNP-203ENST00000430350 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.37
PRNP-203ENST00000430350 UBTFP17480 764 aaKnown RBP23.61■■□□□ 1.37
PRNP-203ENST00000430350 POLA1P09884 1462 aaPredicted RBP23.6■■□□□ 1.37
PRNP-203ENST00000430350 CUX2O14529 1486 aa23.6■■□□□ 1.37
PRNP-203ENST00000430350 PRXQ9BXM0 1461 aa23.56■■□□□ 1.36
PRNP-203ENST00000430350 RAPGEF2Q9Y4G8 1499 aa23.55■■□□□ 1.36
PRNP-203ENST00000430350 CEP162Q5TB80 1403 aa23.53■■□□□ 1.36
PRNP-203ENST00000430350 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
PRNP-203ENST00000430350 ABCA10Q8WWZ4 1543 aa23.52■■□□□ 1.36
PRNP-203ENST00000430350 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
PRNP-203ENST00000430350 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
PRNP-203ENST00000430350 IGF1RP08069 1367 aa23.47■■□□□ 1.35
PRNP-203ENST00000430350 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
PRNP-203ENST00000430350 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
PRNP-203ENST00000430350 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
PRNP-203ENST00000430350 CARMIL1Q5VZK9 1371 aa23.36■■□□□ 1.33
PRNP-203ENST00000430350 WDR62O43379 1518 aa23.34■■□□□ 1.33
PRNP-203ENST00000430350 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.32
PRNP-203ENST00000430350 CLIP1P30622 1438 aa23.33■■□□□ 1.32
PRNP-203ENST00000430350 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
PRNP-203ENST00000430350 TDRD9Q8NDG6 1382 aaKnown RBP23.29■■□□□ 1.32
PRNP-203ENST00000430350 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
PRNP-203ENST00000430350 CUL7Q14999 1698 aa23.27■■□□□ 1.31
PRNP-203ENST00000430350 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
PRNP-203ENST00000430350 TRIM26Q12899 539 aaPredicted RBP23.21■■□□□ 1.31
PRNP-203ENST00000430350 IFT140Q96RY7 1462 aa23.21■■□□□ 1.31
PRNP-203ENST00000430350 RANGAP1P46060 587 aaPredicted RBP23.18■■□□□ 1.3
PRNP-203ENST00000430350 VPS8Q8N3P4 1428 aa23.14■■□□□ 1.3
PRNP-203ENST00000430350 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.29
PRNP-203ENST00000430350 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
PRNP-203ENST00000430350 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
PRNP-203ENST00000430350 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.28
PRNP-203ENST00000430350 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
PRNP-203ENST00000430350 ARAP1Q96P48 1450 aa23.07■■□□□ 1.28
PRNP-203ENST00000430350 ARHGAP35Q9NRY4 1499 aa23.05■■□□□ 1.28
PRNP-203ENST00000430350 FHAD1B1AJZ9 1412 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms