RNA–Protein interactions for RNA: ENST00000335295.4

HBB-201, Transcript of hemoglobin subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HBB, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HBB-201ENST00000335295 NISCHQ9Y2I1 1504 aa33.61■■■□□ 2.97
HBB-201ENST00000335295 ABCC9O60706 1549 aa31.37■■■□□ 2.61
HBB-201ENST00000335295 CCDC180Q9P1Z9 1646 aa30.35■■■□□ 2.45
HBB-201ENST00000335295 DNAJC5BQ9UF47 199 aa30.3■■■□□ 2.44
HBB-201ENST00000335295 RB1CC1Q8TDY2 1594 aa29.33■■■□□ 2.29
HBB-201ENST00000335295 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
HBB-201ENST00000335295 NACADO15069 1562 aa28.93■■■□□ 2.22
HBB-201ENST00000335295 DCAF8L2P0C7V8 631 aa28.82■■■□□ 2.2
HBB-201ENST00000335295 UNC13AQ9UPW8 1703 aa28.7■■■□□ 2.19
HBB-201ENST00000335295 BICRAQ9NZM4 1560 aa28.65■■■□□ 2.18
HBB-201ENST00000335295 CECR2Q9BXF3 1484 aa28.28■■■□□ 2.12
HBB-201ENST00000335295 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
HBB-201ENST00000335295 MYO15BQ96JP2 1530 aa28.24■■■□□ 2.11
HBB-201ENST00000335295 CC2D2AQ9P2K1 1620 aa28.22■■■□□ 2.11
HBB-201ENST00000335295 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.07
HBB-201ENST00000335295 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.06
HBB-201ENST00000335295 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
HBB-201ENST00000335295 ZCCHC6Q5VYS8 1495 aaKnown RBP27.68■■■□□ 2.02
HBB-201ENST00000335295 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
HBB-201ENST00000335295 CUX2O14529 1486 aa27.21■■□□□ 1.95
HBB-201ENST00000335295 ERCC6Q03468 1493 aa27.04■■□□□ 1.92
HBB-201ENST00000335295 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
HBB-201ENST00000335295 NESP48681 1621 aa26.76■■□□□ 1.87
HBB-201ENST00000335295 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
HBB-201ENST00000335295 TRIM41Q8WV44 630 aa26.72■■□□□ 1.87
HBB-201ENST00000335295 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
HBB-201ENST00000335295 THOC2Q8NI27 1593 aaKnown RBP26.53■■□□□ 1.84
HBB-201ENST00000335295 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
HBB-201ENST00000335295 SMARCA2P51531 1590 aa26.41■■□□□ 1.82
HBB-201ENST00000335295 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
HBB-201ENST00000335295 BAZ1BQ9UIG0 1483 aaKnown RBP26.29■■□□□ 1.8
HBB-201ENST00000335295 KIF21AQ7Z4S6 1674 aa26.25■■□□□ 1.79
HBB-201ENST00000335295 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
HBB-201ENST00000335295 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
HBB-201ENST00000335295 PEG3Q9GZU2 1588 aa26.07■■□□□ 1.76
HBB-201ENST00000335295 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
HBB-201ENST00000335295 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
HBB-201ENST00000335295 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
HBB-201ENST00000335295 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
HBB-201ENST00000335295 WDR62O43379 1518 aa25.96■■□□□ 1.75
HBB-201ENST00000335295 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
HBB-201ENST00000335295 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
HBB-201ENST00000335295 FANCD2Q9BXW9 1451 aa25.67■■□□□ 1.7
HBB-201ENST00000335295 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
HBB-201ENST00000335295 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
HBB-201ENST00000335295 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
HBB-201ENST00000335295 WIZO95785 1651 aa25.58■■□□□ 1.68
HBB-201ENST00000335295 URB2Q14146 1524 aaKnown RBP25.57■■□□□ 1.68
HBB-201ENST00000335295 ARHGEF11O15085 1522 aa25.51■■□□□ 1.67
HBB-201ENST00000335295 CFTRP13569 1480 aa25.49■■□□□ 1.67
HBB-201ENST00000335295 CYB5RLQ6IPT4 315 aa25.44■■□□□ 1.66
HBB-201ENST00000335295 ZNF608Q9ULD9 1512 aaPredicted RBP25.42■■□□□ 1.66
HBB-201ENST00000335295 TRHP20396 242 aaPredicted RBP25.38■■□□□ 1.65
HBB-201ENST00000335295 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
HBB-201ENST00000335295 ARAP1Q96P48 1450 aa25.25■■□□□ 1.63
HBB-201ENST00000335295 IFT140Q96RY7 1462 aa25.24■■□□□ 1.63
HBB-201ENST00000335295 TOP2AP11388 1531 aaKnown RBP25.13■■□□□ 1.61
HBB-201ENST00000335295 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
HBB-201ENST00000335295 EIF4G3O43432 1585 aaKnown RBP25.12■■□□□ 1.61
HBB-201ENST00000335295 TOPBP1Q92547 1522 aa25.11■■□□□ 1.61
HBB-201ENST00000335295 AQRO60306 1485 aaKnown RBP eCLIP25.08■■□□□ 1.6
HBB-201ENST00000335295 CHD1O14646 1710 aa25.06■■□□□ 1.6
HBB-201ENST00000335295 FBLN2P98095 1184 aa25.05■■□□□ 1.6
HBB-201ENST00000335295 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
HBB-201ENST00000335295 CCDC88BA6NC98 1476 aa24.95■■□□□ 1.58
HBB-201ENST00000335295 TARBP1Q13395 1621 aaKnown RBP24.92■■□□□ 1.58
HBB-201ENST00000335295 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
HBB-201ENST00000335295 ABCC8Q09428 1581 aa24.85■■□□□ 1.57
HBB-201ENST00000335295 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
HBB-201ENST00000335295 RAD54L2Q9Y4B4 1467 aa24.81■■□□□ 1.56
HBB-201ENST00000335295 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
HBB-201ENST00000335295 CLASP1Q7Z460 1538 aa24.8■■□□□ 1.56
HBB-201ENST00000335295 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
HBB-201ENST00000335295 CHMP7Q8WUX9 453 aaPredicted RBP24.68■■□□□ 1.54
HBB-201ENST00000335295 SOGA1O94964 1423 aa24.68■■□□□ 1.54
HBB-201ENST00000335295 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
HBB-201ENST00000335295 GAPVD1Q14C86 1478 aa24.61■■□□□ 1.53
HBB-201ENST00000335295 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
HBB-201ENST00000335295 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
HBB-201ENST00000335295 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
HBB-201ENST00000335295 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
HBB-201ENST00000335295 ERCC6L2Q5T890 1561 aa24.47■■□□□ 1.51
HBB-201ENST00000335295 WDR97A6NE52 1622 aa24.44■■□□□ 1.5
HBB-201ENST00000335295 CUX1P39880 1505 aa24.41■■□□□ 1.5
HBB-201ENST00000335295 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
HBB-201ENST00000335295 ILDR1Q86SU0 546 aaPredicted RBP24.29■■□□□ 1.48
HBB-201ENST00000335295 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
HBB-201ENST00000335295 KIF13AQ9H1H9 1805 aa24.23■■□□□ 1.47
HBB-201ENST00000335295 KDM4FA0A1W2PPD8 638 aa24.22■■□□□ 1.47
HBB-201ENST00000335295 GRIN2AQ12879 1464 aa24.21■■□□□ 1.47
HBB-201ENST00000335295 ABCA5Q8WWZ7 1642 aa24.2■■□□□ 1.46
HBB-201ENST00000335295 NUP160Q12769 1436 aa24.18■■□□□ 1.46
HBB-201ENST00000335295 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
HBB-201ENST00000335295 FAM69CQ0P6D2 419 aa24.12■■□□□ 1.45
HBB-201ENST00000335295 SHROOM2Q13796 1616 aa24.11■■□□□ 1.45
HBB-201ENST00000335295 ADAMTS12P58397 1594 aa24.08■■□□□ 1.44
HBB-201ENST00000335295 ABCC10Q5T3U5 1492 aa24.04■■□□□ 1.44
HBB-201ENST00000335295 PRG4Q92954 1404 aaPredicted RBP24.03■■□□□ 1.44
HBB-201ENST00000335295 FHAD1B1AJZ9 1412 aa23.98■■□□□ 1.43
HBB-201ENST00000335295 JPH4Q96JJ6 628 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms