RNA–Protein interactions for RNA: ENST00000331923.8

PAXBP1-202, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAXBP1, Length 3,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-202ENST00000331923 NISCHQ9Y2I1 1504 aa28.09■■■□□ 2.09
PAXBP1-202ENST00000331923 DCAF8L2P0C7V8 631 aa27.43■■□□□ 1.98
PAXBP1-202ENST00000331923 SUPT5HO00267 1087 aaKnown RBP27.16■■□□□ 1.94
PAXBP1-202ENST00000331923 SHROOM4Q9ULL8 1493 aa26.97■■□□□ 1.91
PAXBP1-202ENST00000331923 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
PAXBP1-202ENST00000331923 PCGF6Q9BYE7 350 aa25.94■■□□□ 1.74
PAXBP1-202ENST00000331923 FAM9AQ8IZU1 332 aaPredicted RBP25.51■■□□□ 1.67
PAXBP1-202ENST00000331923 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.63
PAXBP1-202ENST00000331923 PPARGC1BQ86YN6 1023 aaKnown RBP25.1■■□□□ 1.61
PAXBP1-202ENST00000331923 HRCP23327 699 aa25.07■■□□□ 1.6
PAXBP1-202ENST00000331923 LOC105371045A0A1W2PR82 267 aa25.05■■□□□ 1.6
PAXBP1-202ENST00000331923 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
PAXBP1-202ENST00000331923 TRIM41Q8WV44 630 aa24.85■■□□□ 1.57
PAXBP1-202ENST00000331923 CCER1Q8TC90 406 aaPredicted RBP24.62■■□□□ 1.53
PAXBP1-202ENST00000331923 TRIM26Q12899 539 aaPredicted RBP24.58■■□□□ 1.52
PAXBP1-202ENST00000331923 RANGAP1P46060 587 aaPredicted RBP24.52■■□□□ 1.52
PAXBP1-202ENST00000331923 ZEB1P37275 1124 aaPredicted RBP24.48■■□□□ 1.51
PAXBP1-202ENST00000331923 YTHDC1Q96MU7 727 aaKnown RBP24.34■■□□□ 1.49
PAXBP1-202ENST00000331923 APLP2Q06481 763 aa24.28■■□□□ 1.48
PAXBP1-202ENST00000331923 CENPBP07199 599 aaPredicted RBP24.23■■□□□ 1.47
PAXBP1-202ENST00000331923 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
PAXBP1-202ENST00000331923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.14■■□□□ 1.46
PAXBP1-202ENST00000331923 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
PAXBP1-202ENST00000331923 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
PAXBP1-202ENST00000331923 HNRNPUL2Q1KMD3 747 aaKnown RBP23.84■■□□□ 1.41
PAXBP1-202ENST00000331923 DIEXFQ68CQ4 756 aaKnown RBP23.74■■□□□ 1.39
PAXBP1-202ENST00000331923 ATP1B4Q9UN42 357 aaPredicted RBP23.7■■□□□ 1.38
PAXBP1-202ENST00000331923 ITGAEP38570 1179 aa23.62■■□□□ 1.37
PAXBP1-202ENST00000331923 GTF3C3Q9Y5Q9 886 aa23.61■■□□□ 1.37
PAXBP1-202ENST00000331923 ZCCHC6Q5VYS8 1495 aaKnown RBP23.45■■□□□ 1.34
PAXBP1-202ENST00000331923 SCAF1Q9H7N4 1312 aaKnown RBP23.36■■□□□ 1.33
PAXBP1-202ENST00000331923 DCAF1Q9Y4B6 1507 aa23.35■■□□□ 1.33
PAXBP1-202ENST00000331923 ACIN1Q9UKV3 1341 aaKnown RBP23.34■■□□□ 1.33
PAXBP1-202ENST00000331923 ABCC9O60706 1549 aa23.27■■□□□ 1.32
PAXBP1-202ENST00000331923 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
PAXBP1-202ENST00000331923 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
PAXBP1-202ENST00000331923 NEFLP07196 543 aa23.19■■□□□ 1.3
PAXBP1-202ENST00000331923 ERICH6Q7L0X2 663 aa23.15■■□□□ 1.3
PAXBP1-202ENST00000331923 ZNF316A6NFI3 1004 aaPredicted RBP23.14■■□□□ 1.3
PAXBP1-202ENST00000331923 BCANQ96GW7 911 aa23.09■■□□□ 1.29
PAXBP1-202ENST00000331923 CNGB1Q14028 1251 aaPredicted RBP23.09■■□□□ 1.29
PAXBP1-202ENST00000331923 MYT1Q01538 1121 aa23.08■■□□□ 1.29
PAXBP1-202ENST00000331923 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
PAXBP1-202ENST00000331923 SCRIBQ14160 1630 aa22.96■■□□□ 1.27
PAXBP1-202ENST00000331923 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
PAXBP1-202ENST00000331923 POLR3GLQ9BT43 218 aa22.86■■□□□ 1.25
PAXBP1-202ENST00000331923 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
PAXBP1-202ENST00000331923 MIER1Q8N108 512 aa22.83■■□□□ 1.24
PAXBP1-202ENST00000331923 RSF1Q96T23 1441 aaPredicted RBP22.8■■□□□ 1.24
PAXBP1-202ENST00000331923 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
PAXBP1-202ENST00000331923 HIRIP3Q9BW71 556 aaPredicted RBP22.51■■□□□ 1.19
PAXBP1-202ENST00000331923 DDX10Q13206 875 aaKnown RBP22.51■■□□□ 1.19
PAXBP1-202ENST00000331923 FKBP8Q14318 412 aa22.47■■□□□ 1.19
PAXBP1-202ENST00000331923 CEP162Q5TB80 1403 aa22.45■■□□□ 1.18
PAXBP1-202ENST00000331923 ANP32CO43423 234 aa22.45■■□□□ 1.18
PAXBP1-202ENST00000331923 TRIM52Q96A61 297 aa22.45■■□□□ 1.18
PAXBP1-202ENST00000331923 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
PAXBP1-202ENST00000331923 ARID3CA6NKF2 412 aa22.4■■□□□ 1.18
PAXBP1-202ENST00000331923 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
PAXBP1-202ENST00000331923 ZNF326Q5BKZ1 582 aaKnown RBP22.31■■□□□ 1.16
PAXBP1-202ENST00000331923 CLIP1P30622 1438 aa22.28■■□□□ 1.16
PAXBP1-202ENST00000331923 SOGA1O94964 1423 aa22.24■■□□□ 1.15
PAXBP1-202ENST00000331923 IRX6P78412 446 aaPredicted RBP22.23■■□□□ 1.15
PAXBP1-202ENST00000331923 CDK11AQ9UQ88 783 aaPredicted RBP22.19■■□□□ 1.14
PAXBP1-202ENST00000331923 HNRNPUQ00839 825 aaKnown RBP eCLIP22.18■■□□□ 1.14
PAXBP1-202ENST00000331923 TNIKQ9UKE5 1360 aa22.13■■□□□ 1.13
PAXBP1-202ENST00000331923 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
PAXBP1-202ENST00000331923 FAM9BQ8IZU0 186 aa22.07■■□□□ 1.12
PAXBP1-202ENST00000331923 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
PAXBP1-202ENST00000331923 CHIC2Q9UKJ5 165 aa22.06■■□□□ 1.12
PAXBP1-202ENST00000331923 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
PAXBP1-202ENST00000331923 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
PAXBP1-202ENST00000331923 GOLGA3Q08378 1498 aa22.05■■□□□ 1.12
PAXBP1-202ENST00000331923 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
PAXBP1-202ENST00000331923 SUPT16HQ9Y5B9 1047 aaKnown RBP22.04■■□□□ 1.12
PAXBP1-202ENST00000331923 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
PAXBP1-202ENST00000331923 TONSLQ96HA7 1378 aa22.02■■□□□ 1.12
PAXBP1-202ENST00000331923 RTL5Q5HYW3 569 aaPredicted RBP22.02■■□□□ 1.12
PAXBP1-202ENST00000331923 DAXXQ9UER7 740 aaPredicted RBP22.02■■□□□ 1.12
PAXBP1-202ENST00000331923 MYT1LQ9UL68 1186 aa21.96■■□□□ 1.11
PAXBP1-202ENST00000331923 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
PAXBP1-202ENST00000331923 KANK4Q5T7N3 995 aaPredicted RBP21.93■■□□□ 1.1
PAXBP1-202ENST00000331923 CLSPNQ9HAW4 1339 aa21.92■■□□□ 1.1
PAXBP1-202ENST00000331923 NPM2Q86SE8 214 aaKnown RBP21.9■■□□□ 1.1
PAXBP1-202ENST00000331923 EEA1Q15075 1411 aa21.89■■□□□ 1.09
PAXBP1-202ENST00000331923 ZNF777Q9ULD5 760 aaPredicted RBP21.88■■□□□ 1.09
PAXBP1-202ENST00000331923 FBLN2P98095 1184 aa21.86■■□□□ 1.09
PAXBP1-202ENST00000331923 KCNH8Q96L42 1107 aa21.86■■□□□ 1.09
PAXBP1-202ENST00000331923 NBR1Q14596 966 aa21.84■■□□□ 1.09
PAXBP1-202ENST00000331923 SLC4A1APQ9BWU0 796 aaKnown RBP21.83■■□□□ 1.09
PAXBP1-202ENST00000331923 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.09
PAXBP1-202ENST00000331923 RRP7BPQ9NSQ0 103 aa21.83■■□□□ 1.08
PAXBP1-202ENST00000331923 CEP164Q9UPV0 1460 aa21.81■■□□□ 1.08
PAXBP1-202ENST00000331923 MRS2Q9HD23 443 aa21.8■■□□□ 1.08
PAXBP1-202ENST00000331923 WIZO95785 1651 aa21.8■■□□□ 1.08
PAXBP1-202ENST00000331923 ANP32EQ9BTT0 268 aa21.79■■□□□ 1.08
PAXBP1-202ENST00000331923 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
PAXBP1-202ENST00000331923 MTUS2Q5JR59 1369 aa21.69■■□□□ 1.06
PAXBP1-202ENST00000331923 ANP32AP39687 249 aaKnown RBP21.68■■□□□ 1.06
PAXBP1-202ENST00000331923 NACADO15069 1562 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms