Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.21■□□□□ 0.03
PTPN20Q4JDL3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN20Q4JDL3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PTPN20Q4JDL3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
PTPN20Q4JDL3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN20Q4JDL3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.21■□□□□ 0.02
PTPN20Q4JDL3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTPN20Q4JDL3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 LINC02486-201ENST00000604157 3000 ntBASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 BRWD1P1-201ENST00000401091 371 ntBASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 SERPINA13P-202ENST00000478994 924 ntBASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 SNORD3B-2-202ENST00000571722 791 ntBASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 RN7SL163P-201ENST00000583100 276 ntBASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
PTPN20Q4JDL3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 AHCYP4-201ENST00000419201 1315 ntBASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 CCT8L1P-201ENST00000465400 1674 ntBASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 AC078875.1-201ENST00000431907 724 ntBASIC15.19■□□□□ 0.02
PTPN20Q4JDL3 AC092580.1-201ENST00000433998 658 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms