RNA–Protein interactions for RNA: ENST00000373758.4

REEP3-201, Transcript of receptor accessory protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene REEP3, Length 5,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3-201ENST00000373758 DCAF8L2P0C7V8 631 aa24.84■■□□□ 1.57
REEP3-201ENST00000373758 SUPT5HO00267 1087 aaKnown RBP24.68■■□□□ 1.54
REEP3-201ENST00000373758 PCGF6Q9BYE7 350 aa24.04■■□□□ 1.44
REEP3-201ENST00000373758 PELP1Q8IZL8 1130 aaKnown RBP24.02■■□□□ 1.44
REEP3-201ENST00000373758 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
REEP3-201ENST00000373758 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
REEP3-201ENST00000373758 EHMT2Q96KQ7 1210 aa23.84■■□□□ 1.41
REEP3-201ENST00000373758 MYT1Q01538 1121 aa23.61■■□□□ 1.37
REEP3-201ENST00000373758 CENPBP07199 599 aaPredicted RBP23.54■■□□□ 1.36
REEP3-201ENST00000373758 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
REEP3-201ENST00000373758 HRCP23327 699 aa23.27■■□□□ 1.32
REEP3-201ENST00000373758 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
REEP3-201ENST00000373758 TTBK1Q5TCY1 1321 aaPredicted RBP23.18■■□□□ 1.3
REEP3-201ENST00000373758 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
REEP3-201ENST00000373758 ERICH6Q7L0X2 663 aa23.1■■□□□ 1.29
REEP3-201ENST00000373758 YTHDC1Q96MU7 727 aaKnown RBP23.04■■□□□ 1.28
REEP3-201ENST00000373758 APLP2Q06481 763 aa22.99■■□□□ 1.27
REEP3-201ENST00000373758 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
REEP3-201ENST00000373758 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
REEP3-201ENST00000373758 TRIM41Q8WV44 630 aa22.68■■□□□ 1.22
REEP3-201ENST00000373758 NEFLP07196 543 aa22.62■■□□□ 1.21
REEP3-201ENST00000373758 LOC105371045A0A1W2PR82 267 aa22.44■■□□□ 1.18
REEP3-201ENST00000373758 RANGAP1P46060 587 aaPredicted RBP22.43■■□□□ 1.18
REEP3-201ENST00000373758 CHIC1Q5VXU3 224 aa22.34■■□□□ 1.17
REEP3-201ENST00000373758 GTF3C3Q9Y5Q9 886 aa22.27■■□□□ 1.16
REEP3-201ENST00000373758 UBTFP17480 764 aaKnown RBP22.26■■□□□ 1.15
REEP3-201ENST00000373758 DIEXFQ68CQ4 756 aaKnown RBP22.24■■□□□ 1.15
REEP3-201ENST00000373758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.12■■□□□ 1.13
REEP3-201ENST00000373758 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
REEP3-201ENST00000373758 ATP1B4Q9UN42 357 aaPredicted RBP21.96■■□□□ 1.11
REEP3-201ENST00000373758 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
REEP3-201ENST00000373758 BCANQ96GW7 911 aa21.8■■□□□ 1.08
REEP3-201ENST00000373758 DAXXQ9UER7 740 aaPredicted RBP21.8■■□□□ 1.08
REEP3-201ENST00000373758 RTL5Q5HYW3 569 aaPredicted RBP21.78■■□□□ 1.08
REEP3-201ENST00000373758 ITGAEP38570 1179 aa21.75■■□□□ 1.07
REEP3-201ENST00000373758 SCAF1Q9H7N4 1312 aaKnown RBP21.67■■□□□ 1.06
REEP3-201ENST00000373758 ZNF316A6NFI3 1004 aaPredicted RBP21.57■■□□□ 1.04
REEP3-201ENST00000373758 CNGB1Q14028 1251 aaPredicted RBP21.55■■□□□ 1.04
REEP3-201ENST00000373758 NEUROD1Q13562 356 aa21.54■■□□□ 1.04
REEP3-201ENST00000373758 POLR3GLQ9BT43 218 aa21.53■■□□□ 1.04
REEP3-201ENST00000373758 CDK11AQ9UQ88 783 aaPredicted RBP21.44■■□□□ 1.02
REEP3-201ENST00000373758 CLSPNQ9HAW4 1339 aa21.22■□□□□ 0.99
REEP3-201ENST00000373758 ANP32CO43423 234 aa21.22■□□□□ 0.99
REEP3-201ENST00000373758 FKBP8Q14318 412 aa21.18■□□□□ 0.98
REEP3-201ENST00000373758 EIF5BO60841 1220 aaKnown RBP21.16■□□□□ 0.98
REEP3-201ENST00000373758 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
REEP3-201ENST00000373758 ANP32AP39687 249 aaKnown RBP21.05■□□□□ 0.96
REEP3-201ENST00000373758 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
REEP3-201ENST00000373758 MIER1Q8N108 512 aa20.97■□□□□ 0.95
REEP3-201ENST00000373758 NPM2Q86SE8 214 aaKnown RBP20.95■□□□□ 0.94
REEP3-201ENST00000373758 ANP32EQ9BTT0 268 aa20.94■□□□□ 0.94
REEP3-201ENST00000373758 MYT1LQ9UL68 1186 aa20.93■□□□□ 0.94
REEP3-201ENST00000373758 NBR1Q14596 966 aa20.92■□□□□ 0.94
REEP3-201ENST00000373758 TRIM52Q96A61 297 aa20.83■□□□□ 0.93
REEP3-201ENST00000373758 DDX10Q13206 875 aaKnown RBP20.79■□□□□ 0.92
REEP3-201ENST00000373758 HNRNPUQ00839 825 aaKnown RBP eCLIP20.78■□□□□ 0.92
REEP3-201ENST00000373758 BCL11AQ9H165 835 aa20.75■□□□□ 0.91
REEP3-201ENST00000373758 ZBTB47Q9UFB7 747 aaPredicted RBP20.71■□□□□ 0.91
REEP3-201ENST00000373758 MYO15BQ96JP2 1530 aa20.71■□□□□ 0.91
REEP3-201ENST00000373758 GLIPR1L2Q4G1C9 344 aa20.71■□□□□ 0.91
REEP3-201ENST00000373758 ZNF326Q5BKZ1 582 aaKnown RBP20.7■□□□□ 0.9
REEP3-201ENST00000373758 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
REEP3-201ENST00000373758 IRX6P78412 446 aaPredicted RBP20.66■□□□□ 0.9
REEP3-201ENST00000373758 CSRNP3Q8WYN3 585 aa20.63■□□□□ 0.89
REEP3-201ENST00000373758 FAM9BQ8IZU0 186 aa20.59■□□□□ 0.89
REEP3-201ENST00000373758 CCDC136Q96JN2 1154 aa20.58■□□□□ 0.88
REEP3-201ENST00000373758 SUPT16HQ9Y5B9 1047 aaKnown RBP20.52■□□□□ 0.88
REEP3-201ENST00000373758 CANXP27824 592 aaKnown RBP20.51■□□□□ 0.87
REEP3-201ENST00000373758 ARXQ96QS3 562 aa20.47■□□□□ 0.87
REEP3-201ENST00000373758 RTN4Q9NQC3 1192 aaKnown RBP20.44■□□□□ 0.86
REEP3-201ENST00000373758 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
REEP3-201ENST00000373758 TONSLQ96HA7 1378 aa20.41■□□□□ 0.86
REEP3-201ENST00000373758 SALL2Q9Y467 1007 aaPredicted RBP20.4■□□□□ 0.86
REEP3-201ENST00000373758 ANP32BQ92688 251 aaKnown RBP20.4■□□□□ 0.86
REEP3-201ENST00000373758 CCDC180Q9P1Z9 1646 aa20.38■□□□□ 0.85
REEP3-201ENST00000373758 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
REEP3-201ENST00000373758 P3H3Q8IVL6 736 aa20.33■□□□□ 0.84
REEP3-201ENST00000373758 UPF2Q9HAU5 1272 aaKnown RBP20.29■□□□□ 0.84
REEP3-201ENST00000373758 HSP90AA1P07900 732 aaKnown RBP20.29■□□□□ 0.84
REEP3-201ENST00000373758 RBM19Q9Y4C8 960 aaKnown RBP20.27■□□□□ 0.84
REEP3-201ENST00000373758 DEKP35659 375 aaKnown RBP20.26■□□□□ 0.83
REEP3-201ENST00000373758 NEFMP07197 916 aa20.26■□□□□ 0.83
REEP3-201ENST00000373758 TMC1Q8TDI8 760 aa20.24■□□□□ 0.83
REEP3-201ENST00000373758 NOP58Q9Y2X3 529 aaKnown RBP20.22■□□□□ 0.83
REEP3-201ENST00000373758 TSHZ2Q9NRE2 1034 aa20.19■□□□□ 0.82
REEP3-201ENST00000373758 LAS1LQ9Y4W2 734 aaKnown RBP20.18■□□□□ 0.82
REEP3-201ENST00000373758 DDRGK1Q96HY6 314 aa20.14■□□□□ 0.81
REEP3-201ENST00000373758 PPP4R2Q9NY27 417 aa20.13■□□□□ 0.81
REEP3-201ENST00000373758 ERICH6BQ5W0A0 696 aa20.12■□□□□ 0.81
REEP3-201ENST00000373758 PPM1GO15355 546 aaPredicted RBP20.12■□□□□ 0.81
REEP3-201ENST00000373758 ARID3CA6NKF2 412 aa20.11■□□□□ 0.81
REEP3-201ENST00000373758 SENP3-EIF4A1A0A087X0R7 540 aa20.1■□□□□ 0.81
REEP3-201ENST00000373758 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
REEP3-201ENST00000373758 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.08■□□□□ 0.81
REEP3-201ENST00000373758 B4GALNT3Q6L9W6 998 aa20.08■□□□□ 0.8
REEP3-201ENST00000373758 TRIM44Q96DX7 344 aaPredicted RBP20.04■□□□□ 0.8
REEP3-201ENST00000373758 NAP1L5Q96NT1 182 aaPredicted RBP20.03■□□□□ 0.8
REEP3-201ENST00000373758 EIF4G2P78344 907 aaKnown RBP eCLIP20.01■□□□□ 0.79
REEP3-201ENST00000373758 CHIC2Q9UKJ5 165 aa19.98■□□□□ 0.79
REEP3-201ENST00000373758 BECN1Q14457 450 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms