RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 NISCHQ9Y2I1 1504 aa25.91■■□□□ 1.74
ITSN1-210ENST00000399353 PCGF6Q9BYE7 350 aa24.85■■□□□ 1.57
ITSN1-210ENST00000399353 HRCP23327 699 aa24.84■■□□□ 1.57
ITSN1-210ENST00000399353 PPARGC1BQ86YN6 1023 aaKnown RBP24.84■■□□□ 1.57
ITSN1-210ENST00000399353 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
ITSN1-210ENST00000399353 SHROOM4Q9ULL8 1493 aa24.54■■□□□ 1.52
ITSN1-210ENST00000399353 PELP1Q8IZL8 1130 aaKnown RBP24.5■■□□□ 1.51
ITSN1-210ENST00000399353 DCAF8L2P0C7V8 631 aa24.37■■□□□ 1.49
ITSN1-210ENST00000399353 SCAF1Q9H7N4 1312 aaKnown RBP23.79■■□□□ 1.4
ITSN1-210ENST00000399353 LOC105371045A0A1W2PR82 267 aa23.64■■□□□ 1.37
ITSN1-210ENST00000399353 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
ITSN1-210ENST00000399353 MYT1Q01538 1121 aa23.59■■□□□ 1.37
ITSN1-210ENST00000399353 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.36
ITSN1-210ENST00000399353 TRIM26Q12899 539 aaPredicted RBP23.44■■□□□ 1.34
ITSN1-210ENST00000399353 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
ITSN1-210ENST00000399353 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.33
ITSN1-210ENST00000399353 GTF3C3Q9Y5Q9 886 aa23.31■■□□□ 1.32
ITSN1-210ENST00000399353 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
ITSN1-210ENST00000399353 NEUROD1Q13562 356 aa23.18■■□□□ 1.3
ITSN1-210ENST00000399353 YTHDC1Q96MU7 727 aaKnown RBP23.18■■□□□ 1.3
ITSN1-210ENST00000399353 FAM9AQ8IZU1 332 aaPredicted RBP23.16■■□□□ 1.3
ITSN1-210ENST00000399353 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
ITSN1-210ENST00000399353 CCER1Q8TC90 406 aaPredicted RBP22.99■■□□□ 1.27
ITSN1-210ENST00000399353 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
ITSN1-210ENST00000399353 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.89■■□□□ 1.26
ITSN1-210ENST00000399353 DIEXFQ68CQ4 756 aaKnown RBP22.85■■□□□ 1.25
ITSN1-210ENST00000399353 DCAF1Q9Y4B6 1507 aa22.7■■□□□ 1.22
ITSN1-210ENST00000399353 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
ITSN1-210ENST00000399353 BCL11AQ9H165 835 aa22.32■■□□□ 1.16
ITSN1-210ENST00000399353 CCDC180Q9P1Z9 1646 aa22.26■■□□□ 1.15
ITSN1-210ENST00000399353 MIER1Q8N108 512 aa22.15■■□□□ 1.14
ITSN1-210ENST00000399353 ZNF316A6NFI3 1004 aaPredicted RBP22.13■■□□□ 1.13
ITSN1-210ENST00000399353 BCANQ96GW7 911 aa22.12■■□□□ 1.13
ITSN1-210ENST00000399353 ANP32EQ9BTT0 268 aa22.02■■□□□ 1.12
ITSN1-210ENST00000399353 RANGAP1P46060 587 aaPredicted RBP21.97■■□□□ 1.11
ITSN1-210ENST00000399353 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
ITSN1-210ENST00000399353 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
ITSN1-210ENST00000399353 ERICH6Q7L0X2 663 aa21.86■■□□□ 1.09
ITSN1-210ENST00000399353 UBTFP17480 764 aaKnown RBP21.81■■□□□ 1.08
ITSN1-210ENST00000399353 SUPT16HQ9Y5B9 1047 aaKnown RBP21.79■■□□□ 1.08
ITSN1-210ENST00000399353 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
ITSN1-210ENST00000399353 APLP2Q06481 763 aa21.74■■□□□ 1.07
ITSN1-210ENST00000399353 TSHZ2Q9NRE2 1034 aa21.74■■□□□ 1.07
ITSN1-210ENST00000399353 NEFLP07196 543 aa21.63■■□□□ 1.05
ITSN1-210ENST00000399353 FKBP8Q14318 412 aa21.59■■□□□ 1.05
ITSN1-210ENST00000399353 ITGAEP38570 1179 aa21.58■■□□□ 1.05
ITSN1-210ENST00000399353 PRKCSHP14314 528 aaPredicted RBP21.46■■□□□ 1.03
ITSN1-210ENST00000399353 RBM19Q9Y4C8 960 aaKnown RBP21.36■■□□□ 1.01
ITSN1-210ENST00000399353 CLSPNQ9HAW4 1339 aa21.3■■□□□ 1
ITSN1-210ENST00000399353 KCNH8Q96L42 1107 aa21.27■■□□□ 1
ITSN1-210ENST00000399353 TRIM52Q96A61 297 aa21.26■□□□□ 0.99
ITSN1-210ENST00000399353 IRX6P78412 446 aaPredicted RBP21.21■□□□□ 0.99
ITSN1-210ENST00000399353 NBR1Q14596 966 aa21.21■□□□□ 0.99
ITSN1-210ENST00000399353 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
ITSN1-210ENST00000399353 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
ITSN1-210ENST00000399353 ATP1B4Q9UN42 357 aaPredicted RBP21.11■□□□□ 0.97
ITSN1-210ENST00000399353 RTN4Q9NQC3 1192 aaKnown RBP21.08■□□□□ 0.97
ITSN1-210ENST00000399353 DEKP35659 375 aaKnown RBP21.07■□□□□ 0.96
ITSN1-210ENST00000399353 ANO8Q9HCE9 1232 aaPredicted RBP21.07■□□□□ 0.96
ITSN1-210ENST00000399353 SCRIBQ14160 1630 aa21.05■□□□□ 0.96
ITSN1-210ENST00000399353 HIRIP3Q9BW71 556 aaPredicted RBP21.05■□□□□ 0.96
ITSN1-210ENST00000399353 RSF1Q96T23 1441 aaPredicted RBP21.04■□□□□ 0.96
ITSN1-210ENST00000399353 CCDC136Q96JN2 1154 aa21.04■□□□□ 0.96
ITSN1-210ENST00000399353 MSH5O43196 834 aa20.97■□□□□ 0.95
ITSN1-210ENST00000399353 RTL5Q5HYW3 569 aaPredicted RBP20.97■□□□□ 0.95
ITSN1-210ENST00000399353 CEP162Q5TB80 1403 aa20.93■□□□□ 0.94
ITSN1-210ENST00000399353 ABCC9O60706 1549 aa20.92■□□□□ 0.94
ITSN1-210ENST00000399353 EIF5BO60841 1220 aaKnown RBP20.91■□□□□ 0.94
ITSN1-210ENST00000399353 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.91■□□□□ 0.94
ITSN1-210ENST00000399353 CNGB1Q14028 1251 aaPredicted RBP20.89■□□□□ 0.93
ITSN1-210ENST00000399353 ANP32CO43423 234 aa20.85■□□□□ 0.93
ITSN1-210ENST00000399353 HNRNPUQ00839 825 aaKnown RBP eCLIP20.82■□□□□ 0.92
ITSN1-210ENST00000399353 SALL2Q9Y467 1007 aaPredicted RBP20.8■□□□□ 0.92
ITSN1-210ENST00000399353 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
ITSN1-210ENST00000399353 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
ITSN1-210ENST00000399353 MYT1LQ9UL68 1186 aa20.71■□□□□ 0.91
ITSN1-210ENST00000399353 NPM2Q86SE8 214 aaKnown RBP20.7■□□□□ 0.9
ITSN1-210ENST00000399353 B4GALNT3Q6L9W6 998 aa20.68■□□□□ 0.9
ITSN1-210ENST00000399353 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
ITSN1-210ENST00000399353 NOP58Q9Y2X3 529 aaKnown RBP20.63■□□□□ 0.89
ITSN1-210ENST00000399353 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
ITSN1-210ENST00000399353 SENP3-EIF4A1A0A087X0R7 540 aa20.61■□□□□ 0.89
ITSN1-210ENST00000399353 IL27Q8NEV9 243 aa20.6■□□□□ 0.89
ITSN1-210ENST00000399353 SOGA1O94964 1423 aa20.6■□□□□ 0.89
ITSN1-210ENST00000399353 ANP32AP39687 249 aaKnown RBP20.59■□□□□ 0.89
ITSN1-210ENST00000399353 TNIKQ9UKE5 1360 aa20.58■□□□□ 0.88
ITSN1-210ENST00000399353 SIN3AQ96ST3 1273 aa20.57■□□□□ 0.88
ITSN1-210ENST00000399353 FANCIQ9NVI1 1328 aa20.57■□□□□ 0.88
ITSN1-210ENST00000399353 ZBTB47Q9UFB7 747 aaPredicted RBP20.57■□□□□ 0.88
ITSN1-210ENST00000399353 FAM9BQ8IZU0 186 aa20.53■□□□□ 0.88
ITSN1-210ENST00000399353 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
ITSN1-210ENST00000399353 PAK3O75914 559 aaPredicted RBP20.51■□□□□ 0.87
ITSN1-210ENST00000399353 LAS1LQ9Y4W2 734 aaKnown RBP20.51■□□□□ 0.87
ITSN1-210ENST00000399353 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
ITSN1-210ENST00000399353 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
ITSN1-210ENST00000399353 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
ITSN1-210ENST00000399353 CLIP1P30622 1438 aa20.45■□□□□ 0.86
ITSN1-210ENST00000399353 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
ITSN1-210ENST00000399353 P3H3Q8IVL6 736 aa20.4■□□□□ 0.86
ITSN1-210ENST00000399353 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms