RNA–Protein interactions for RNA: ENST00000426713.1

LINC00116-202, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LINC00116, Length 461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-202ENST00000426713 NISCHQ9Y2I1 1504 aa38.02■■■■□ 3.68
LINC00116-202ENST00000426713 ABCC9O60706 1549 aa34.84■■■■□ 3.17
LINC00116-202ENST00000426713 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
LINC00116-202ENST00000426713 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
LINC00116-202ENST00000426713 RB1CC1Q8TDY2 1594 aa32.91■■■□□ 2.86
LINC00116-202ENST00000426713 NACADO15069 1562 aa32.53■■■□□ 2.8
LINC00116-202ENST00000426713 DCAF8L2P0C7V8 631 aa32.53■■■□□ 2.8
LINC00116-202ENST00000426713 PABPN1Q86U42 306 aaKnown RBP eCLIP32.39■■■□□ 2.78
LINC00116-202ENST00000426713 UNC13AQ9UPW8 1703 aa32.17■■■□□ 2.74
LINC00116-202ENST00000426713 BICRAQ9NZM4 1560 aa31.91■■■□□ 2.7
LINC00116-202ENST00000426713 MYO15BQ96JP2 1530 aa31.85■■■□□ 2.69
LINC00116-202ENST00000426713 CC2D2AQ9P2K1 1620 aa31.41■■■□□ 2.62
LINC00116-202ENST00000426713 ZCCHC6Q5VYS8 1495 aaKnown RBP31.4■■■□□ 2.62
LINC00116-202ENST00000426713 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
LINC00116-202ENST00000426713 SHROOM4Q9ULL8 1493 aa31.39■■■□□ 2.62
LINC00116-202ENST00000426713 SCRIBQ14160 1630 aa31.34■■■□□ 2.61
LINC00116-202ENST00000426713 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
LINC00116-202ENST00000426713 EIF4G1Q04637 1599 aaKnown RBP31.21■■■□□ 2.59
LINC00116-202ENST00000426713 DNAJC5Q9H3Z4 198 aa30.63■■■□□ 2.49
LINC00116-202ENST00000426713 ERCC6Q03468 1493 aa30.14■■■□□ 2.42
LINC00116-202ENST00000426713 CUX2O14529 1486 aa30.12■■■□□ 2.41
LINC00116-202ENST00000426713 NCAPD3P42695 1498 aa30.02■■■□□ 2.4
LINC00116-202ENST00000426713 ATAD2BQ9ULI0 1458 aa29.9■■■□□ 2.38
LINC00116-202ENST00000426713 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
LINC00116-202ENST00000426713 NESP48681 1621 aa29.78■■■□□ 2.36
LINC00116-202ENST00000426713 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
LINC00116-202ENST00000426713 HMGXB3Q12766 1538 aa29.76■■■□□ 2.36
LINC00116-202ENST00000426713 BAZ1BQ9UIG0 1483 aaKnown RBP29.65■■■□□ 2.34
LINC00116-202ENST00000426713 BAZ1AQ9NRL2 1556 aaPredicted RBP29.56■■■□□ 2.32
LINC00116-202ENST00000426713 THOC2Q8NI27 1593 aaKnown RBP29.51■■■□□ 2.31
LINC00116-202ENST00000426713 LAMC3Q9Y6N6 1575 aa29.46■■■□□ 2.31
LINC00116-202ENST00000426713 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
LINC00116-202ENST00000426713 KIF21AQ7Z4S6 1674 aa29.38■■■□□ 2.29
LINC00116-202ENST00000426713 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
LINC00116-202ENST00000426713 MROH2BQ7Z745 1585 aa29.32■■■□□ 2.28
LINC00116-202ENST00000426713 TRIM41Q8WV44 630 aa29.27■■■□□ 2.28
LINC00116-202ENST00000426713 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
LINC00116-202ENST00000426713 MRC2Q9UBG0 1479 aa29.1■■■□□ 2.25
LINC00116-202ENST00000426713 WDR62O43379 1518 aa29■■■□□ 2.23
LINC00116-202ENST00000426713 WIZO95785 1651 aa28.99■■■□□ 2.23
LINC00116-202ENST00000426713 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
LINC00116-202ENST00000426713 FANCD2Q9BXW9 1451 aa28.83■■■□□ 2.21
LINC00116-202ENST00000426713 OSCARQ8IYS5 282 aa28.75■■■□□ 2.19
LINC00116-202ENST00000426713 CFTRP13569 1480 aa28.68■■■□□ 2.18
LINC00116-202ENST00000426713 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
LINC00116-202ENST00000426713 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
LINC00116-202ENST00000426713 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
LINC00116-202ENST00000426713 PRDM2Q13029 1718 aa28.4■■■□□ 2.14
LINC00116-202ENST00000426713 RIMBP3CA6NJZ7 1639 aa28.4■■■□□ 2.14
LINC00116-202ENST00000426713 RIMBP3BA6NNM3 1639 aa28.4■■■□□ 2.14
LINC00116-202ENST00000426713 RIMBP3Q9UFD9 1639 aa28.4■■■□□ 2.14
LINC00116-202ENST00000426713 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
LINC00116-202ENST00000426713 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
LINC00116-202ENST00000426713 ARHGEF11O15085 1522 aa28.25■■■□□ 2.11
LINC00116-202ENST00000426713 CCDC88BA6NC98 1476 aa28.23■■■□□ 2.11
LINC00116-202ENST00000426713 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
LINC00116-202ENST00000426713 EIF4G3O43432 1585 aaKnown RBP28.16■■■□□ 2.1
LINC00116-202ENST00000426713 CYB5RLQ6IPT4 315 aa28.16■■■□□ 2.1
LINC00116-202ENST00000426713 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
LINC00116-202ENST00000426713 FBLN2P98095 1184 aa28.08■■■□□ 2.09
LINC00116-202ENST00000426713 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
LINC00116-202ENST00000426713 CHD1O14646 1710 aa28.07■■■□□ 2.08
LINC00116-202ENST00000426713 TRHP20396 242 aaPredicted RBP28.06■■■□□ 2.08
LINC00116-202ENST00000426713 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.082e-7■■■■■ 35
LINC00116-202ENST00000426713 TARBP1Q13395 1621 aaKnown RBP27.97■■■□□ 2.07
LINC00116-202ENST00000426713 ARAP1Q96P48 1450 aa27.93■■■□□ 2.06
LINC00116-202ENST00000426713 POLA1P09884 1462 aaPredicted RBP27.89■■■□□ 2.06
LINC00116-202ENST00000426713 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
LINC00116-202ENST00000426713 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
LINC00116-202ENST00000426713 SOGA1O94964 1423 aa27.8■■■□□ 2.04
LINC00116-202ENST00000426713 SNAPC4Q5SXM2 1469 aa27.75■■■□□ 2.03
LINC00116-202ENST00000426713 CHMP7Q8WUX9 453 aaPredicted RBP27.73■■■□□ 2.03
LINC00116-202ENST00000426713 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
LINC00116-202ENST00000426713 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
LINC00116-202ENST00000426713 CLASP1Q7Z460 1538 aa27.66■■■□□ 2.02
LINC00116-202ENST00000426713 WDR97A6NE52 1622 aa27.63■■■□□ 2.01
LINC00116-202ENST00000426713 MAGI1Q96QZ7 1491 aaPredicted RBP27.62■■■□□ 2.01
LINC00116-202ENST00000426713 GRIN2BQ13224 1484 aa27.58■■■□□ 2.01
LINC00116-202ENST00000426713 CUX1P39880 1505 aa27.57■■■□□ 2
LINC00116-202ENST00000426713 AEBP2Q6ZN18 517 aaPredicted RBP27.57■■■□□ 2
LINC00116-202ENST00000426713 SYNJ2O15056 1496 aa27.54■■■□□ 2
LINC00116-202ENST00000426713 PBRM1Q86U86 1689 aa27.49■■□□□ 1.99
LINC00116-202ENST00000426713 GAPVD1Q14C86 1478 aa27.45■■□□□ 1.99
LINC00116-202ENST00000426713 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
LINC00116-202ENST00000426713 ABCA10Q8WWZ4 1543 aa27.3■■□□□ 1.96
LINC00116-202ENST00000426713 ERCC6L2Q5T890 1561 aa27.24■■□□□ 1.95
LINC00116-202ENST00000426713 GRIN2AQ12879 1464 aa27.23■■□□□ 1.95
LINC00116-202ENST00000426713 CEP170Q5SW79 1584 aa27.17■■□□□ 1.94
LINC00116-202ENST00000426713 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
LINC00116-202ENST00000426713 WRNQ14191 1432 aaPredicted RBP eCLIP27.16■■□□□ 1.94
LINC00116-202ENST00000426713 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
LINC00116-202ENST00000426713 NUP160Q12769 1436 aa27.11■■□□□ 1.93
LINC00116-202ENST00000426713 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
LINC00116-202ENST00000426713 SHROOM2Q13796 1616 aa27.04■■□□□ 1.92
LINC00116-202ENST00000426713 TOP2BQ02880 1626 aa27.01■■□□□ 1.91
LINC00116-202ENST00000426713 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
LINC00116-202ENST00000426713 KIF13AQ9H1H9 1805 aa26.98■■□□□ 1.91
LINC00116-202ENST00000426713 PRG4Q92954 1404 aaPredicted RBP26.97■■□□□ 1.91
LINC00116-202ENST00000426713 ERICH3Q5RHP9 1530 aa26.95■■□□□ 1.91
LINC00116-202ENST00000426713 JPH4Q96JJ6 628 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms