RNA–Protein interactions for RNA: ENST00000640978.1

CCDC197-206, Transcript of coiled-coil domain containing 197, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC197, Length 1,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-206ENST00000640978 NISCHQ9Y2I1 1504 aa34.85■■■■□ 3.17
CCDC197-206ENST00000640978 ABCC9O60706 1549 aa31.54■■■□□ 2.64
CCDC197-206ENST00000640978 CCDC180Q9P1Z9 1646 aa31.33■■■□□ 2.61
CCDC197-206ENST00000640978 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
CCDC197-206ENST00000640978 DNAJC5BQ9UF47 199 aa29.82■■■□□ 2.36
CCDC197-206ENST00000640978 NACADO15069 1562 aa29.65■■■□□ 2.34
CCDC197-206ENST00000640978 DCAF8L2P0C7V8 631 aa29.4■■■□□ 2.3
CCDC197-206ENST00000640978 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
CCDC197-206ENST00000640978 UNC13AQ9UPW8 1703 aa29.29■■■□□ 2.28
CCDC197-206ENST00000640978 MYO15BQ96JP2 1530 aa29.2■■■□□ 2.27
CCDC197-206ENST00000640978 BICRAQ9NZM4 1560 aa29.14■■■□□ 2.26
CCDC197-206ENST00000640978 ZCCHC6Q5VYS8 1495 aaKnown RBP28.86■■■□□ 2.21
CCDC197-206ENST00000640978 DCAF1Q9Y4B6 1507 aa28.76■■■□□ 2.2
CCDC197-206ENST00000640978 SHROOM4Q9ULL8 1493 aa28.62■■■□□ 2.17
CCDC197-206ENST00000640978 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
CCDC197-206ENST00000640978 CC2D2AQ9P2K1 1620 aa28.49■■■□□ 2.15
CCDC197-206ENST00000640978 CECR2Q9BXF3 1484 aa28.42■■■□□ 2.14
CCDC197-206ENST00000640978 EIF4G1Q04637 1599 aaKnown RBP28.39■■■□□ 2.14
CCDC197-206ENST00000640978 DNAJC5Q9H3Z4 198 aa27.44■■□□□ 1.98
CCDC197-206ENST00000640978 NCAPD3P42695 1498 aa27.41■■□□□ 1.98
CCDC197-206ENST00000640978 ATAD2BQ9ULI0 1458 aa27.31■■□□□ 1.96
CCDC197-206ENST00000640978 CUX2O14529 1486 aa27.23■■□□□ 1.95
CCDC197-206ENST00000640978 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
CCDC197-206ENST00000640978 HMGXB3Q12766 1538 aa27.18■■□□□ 1.94
CCDC197-206ENST00000640978 ERCC6Q03468 1493 aa27.18■■□□□ 1.94
CCDC197-206ENST00000640978 SMARCA2P51531 1590 aa27.17■■□□□ 1.94
CCDC197-206ENST00000640978 NESP48681 1621 aa27.08■■□□□ 1.93
CCDC197-206ENST00000640978 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
CCDC197-206ENST00000640978 BAZ1BQ9UIG0 1483 aaKnown RBP26.99■■□□□ 1.91
CCDC197-206ENST00000640978 PEG3Q9GZU2 1588 aa26.98■■□□□ 1.91
CCDC197-206ENST00000640978 MROH2BQ7Z745 1585 aa26.89■■□□□ 1.89
CCDC197-206ENST00000640978 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
CCDC197-206ENST00000640978 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
CCDC197-206ENST00000640978 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.86
CCDC197-206ENST00000640978 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
CCDC197-206ENST00000640978 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
CCDC197-206ENST00000640978 WIZO95785 1651 aa26.54■■□□□ 1.84
CCDC197-206ENST00000640978 MRC2Q9UBG0 1479 aa26.44■■□□□ 1.82
CCDC197-206ENST00000640978 WDR62O43379 1518 aa26.41■■□□□ 1.82
CCDC197-206ENST00000640978 CEP164Q9UPV0 1460 aa26.28■■□□□ 1.8
CCDC197-206ENST00000640978 FANCD2Q9BXW9 1451 aa26.25■■□□□ 1.79
CCDC197-206ENST00000640978 RSF1Q96T23 1441 aaPredicted RBP26.24■■□□□ 1.79
CCDC197-206ENST00000640978 CFTRP13569 1480 aa26.23■■□□□ 1.79
CCDC197-206ENST00000640978 TOP2AP11388 1531 aaKnown RBP26.17■■□□□ 1.78
CCDC197-206ENST00000640978 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
CCDC197-206ENST00000640978 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
CCDC197-206ENST00000640978 PRDM2Q13029 1718 aa25.92■■□□□ 1.74
CCDC197-206ENST00000640978 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
CCDC197-206ENST00000640978 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.73
CCDC197-206ENST00000640978 ZNF608Q9ULD9 1512 aaPredicted RBP25.81■■□□□ 1.72
CCDC197-206ENST00000640978 IFT140Q96RY7 1462 aa25.76■■□□□ 1.71
CCDC197-206ENST00000640978 TOPBP1Q92547 1522 aa25.75■■□□□ 1.71
CCDC197-206ENST00000640978 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
CCDC197-206ENST00000640978 RIMBP3CA6NJZ7 1639 aa25.68■■□□□ 1.7
CCDC197-206ENST00000640978 RIMBP3BA6NNM3 1639 aa25.68■■□□□ 1.7
CCDC197-206ENST00000640978 RIMBP3Q9UFD9 1639 aa25.68■■□□□ 1.7
CCDC197-206ENST00000640978 EIF4G3O43432 1585 aaKnown RBP25.63■■□□□ 1.69
CCDC197-206ENST00000640978 DNMBPQ6XZF7 1577 aa25.63■■□□□ 1.69
CCDC197-206ENST00000640978 ABCC8Q09428 1581 aa25.6■■□□□ 1.69
CCDC197-206ENST00000640978 ARHGEF11O15085 1522 aa25.57■■□□□ 1.68
CCDC197-206ENST00000640978 TARBP1Q13395 1621 aaKnown RBP25.56■■□□□ 1.68
CCDC197-206ENST00000640978 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.68
CCDC197-206ENST00000640978 POLA1P09884 1462 aaPredicted RBP25.48■■□□□ 1.67
CCDC197-206ENST00000640978 CHD1O14646 1710 aa25.47■■□□□ 1.67
CCDC197-206ENST00000640978 RAD54L2Q9Y4B4 1467 aa25.41■■□□□ 1.66
CCDC197-206ENST00000640978 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
CCDC197-206ENST00000640978 ARAP1Q96P48 1450 aa25.33■■□□□ 1.65
CCDC197-206ENST00000640978 SOGA1O94964 1423 aa25.32■■□□□ 1.64
CCDC197-206ENST00000640978 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
CCDC197-206ENST00000640978 FBLN2P98095 1184 aa25.3■■□□□ 1.64
CCDC197-206ENST00000640978 FGD5Q6ZNL6 1462 aa25.29■■□□□ 1.64
CCDC197-206ENST00000640978 CUX1P39880 1505 aa25.27■■□□□ 1.64
CCDC197-206ENST00000640978 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
CCDC197-206ENST00000640978 WDR97A6NE52 1622 aa25.22■■□□□ 1.63
CCDC197-206ENST00000640978 CLASP1Q7Z460 1538 aa25.2■■□□□ 1.62
CCDC197-206ENST00000640978 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.62
CCDC197-206ENST00000640978 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
CCDC197-206ENST00000640978 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
CCDC197-206ENST00000640978 CHMP7Q8WUX9 453 aaPredicted RBP25.09■■□□□ 1.61
CCDC197-206ENST00000640978 TRHP20396 242 aaPredicted RBP25.08■■□□□ 1.61
CCDC197-206ENST00000640978 SYNJ2O15056 1496 aa25.07■■□□□ 1.6
CCDC197-206ENST00000640978 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
CCDC197-206ENST00000640978 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
CCDC197-206ENST00000640978 ABCA5Q8WWZ7 1642 aa24.99■■□□□ 1.59
CCDC197-206ENST00000640978 ABCA10Q8WWZ4 1543 aa24.99■■□□□ 1.59
CCDC197-206ENST00000640978 ERCC6L2Q5T890 1561 aa24.83■■□□□ 1.57
CCDC197-206ENST00000640978 GRIN2AQ12879 1464 aa24.83■■□□□ 1.56
CCDC197-206ENST00000640978 ADAMTS12P58397 1594 aa24.81■■□□□ 1.56
CCDC197-206ENST00000640978 WRNQ14191 1432 aaPredicted RBP eCLIP24.8■■□□□ 1.56
CCDC197-206ENST00000640978 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
CCDC197-206ENST00000640978 CEP170Q5SW79 1584 aa24.78■■□□□ 1.56
CCDC197-206ENST00000640978 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
CCDC197-206ENST00000640978 NUP160Q12769 1436 aa24.77■■□□□ 1.56
CCDC197-206ENST00000640978 SHROOM2Q13796 1616 aa24.68■■□□□ 1.54
CCDC197-206ENST00000640978 FHAD1B1AJZ9 1412 aa24.68■■□□□ 1.54
CCDC197-206ENST00000640978 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
CCDC197-206ENST00000640978 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
CCDC197-206ENST00000640978 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
CCDC197-206ENST00000640978 JPH4Q96JJ6 628 aa24.45■■□□□ 1.51
CCDC197-206ENST00000640978 KIF13AQ9H1H9 1805 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms