RNA–Protein interactions for RNA: ENST00000458264.1

LINC01248-201, Transcript of long intergenic non-protein coding RNA 1248, humanhuman

TSL 3 BASIC

Gene LINC01248, Length 468 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01248-201ENST00000458264 NISCHQ9Y2I1 1504 aa37.18■■■■□ 3.54
LINC01248-201ENST00000458264 ABCC9O60706 1549 aa33.41■■■□□ 2.94
LINC01248-201ENST00000458264 CCDC180Q9P1Z9 1646 aa33.34■■■□□ 2.93
LINC01248-201ENST00000458264 RB1CC1Q8TDY2 1594 aa31.8■■■□□ 2.68
LINC01248-201ENST00000458264 NACADO15069 1562 aa31.58■■■□□ 2.65
LINC01248-201ENST00000458264 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
LINC01248-201ENST00000458264 DNAJC5BQ9UF47 199 aa31.4■■■□□ 2.62
LINC01248-201ENST00000458264 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
LINC01248-201ENST00000458264 PABPN1Q86U42 306 aaKnown RBP eCLIP31.13■■■□□ 2.57
LINC01248-201ENST00000458264 UNC13AQ9UPW8 1703 aa30.95■■■□□ 2.55
LINC01248-201ENST00000458264 BICRAQ9NZM4 1560 aa30.83■■■□□ 2.53
LINC01248-201ENST00000458264 ZCCHC6Q5VYS8 1495 aaKnown RBP30.8■■■□□ 2.52
LINC01248-201ENST00000458264 DCAF1Q9Y4B6 1507 aa30.73■■■□□ 2.51
LINC01248-201ENST00000458264 SHROOM4Q9ULL8 1493 aa30.49■■■□□ 2.47
LINC01248-201ENST00000458264 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
LINC01248-201ENST00000458264 CC2D2AQ9P2K1 1620 aa30.16■■■□□ 2.42
LINC01248-201ENST00000458264 CECR2Q9BXF3 1484 aa30.12■■■□□ 2.41
LINC01248-201ENST00000458264 EIF4G1Q04637 1599 aaKnown RBP30.1■■■□□ 2.41
LINC01248-201ENST00000458264 NCAPD3P42695 1498 aa29.18■■■□□ 2.26
LINC01248-201ENST00000458264 ATAD2BQ9ULI0 1458 aa29.06■■■□□ 2.24
LINC01248-201ENST00000458264 SMARCA4P51532 1647 aa28.98■■■□□ 2.23
LINC01248-201ENST00000458264 SMARCA2P51531 1590 aa28.97■■■□□ 2.23
LINC01248-201ENST00000458264 HMGXB3Q12766 1538 aa28.92■■■□□ 2.22
LINC01248-201ENST00000458264 DNAJC5Q9H3Z4 198 aa28.9■■■□□ 2.22
LINC01248-201ENST00000458264 ERCC6Q03468 1493 aa28.87■■■□□ 2.21
LINC01248-201ENST00000458264 BAZ1AQ9NRL2 1556 aaPredicted RBP28.87■■■□□ 2.21
LINC01248-201ENST00000458264 CUX2O14529 1486 aa28.85■■■□□ 2.21
LINC01248-201ENST00000458264 BAZ1BQ9UIG0 1483 aaKnown RBP28.77■■■□□ 2.2
LINC01248-201ENST00000458264 PEG3Q9GZU2 1588 aa28.72■■■□□ 2.19
LINC01248-201ENST00000458264 NESP48681 1621 aa28.67■■■□□ 2.18
LINC01248-201ENST00000458264 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
LINC01248-201ENST00000458264 LAMC3Q9Y6N6 1575 aa28.49■■■□□ 2.15
LINC01248-201ENST00000458264 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
LINC01248-201ENST00000458264 PDS5BQ9NTI5 1447 aa28.37■■■□□ 2.13
LINC01248-201ENST00000458264 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
LINC01248-201ENST00000458264 WIZO95785 1651 aa28.25■■■□□ 2.11
LINC01248-201ENST00000458264 KIF21AQ7Z4S6 1674 aa28.25■■■□□ 2.11
LINC01248-201ENST00000458264 MRC2Q9UBG0 1479 aa28.1■■■□□ 2.09
LINC01248-201ENST00000458264 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
LINC01248-201ENST00000458264 WDR62O43379 1518 aa28.02■■■□□ 2.08
LINC01248-201ENST00000458264 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
LINC01248-201ENST00000458264 CFTRP13569 1480 aa27.95■■■□□ 2.06
LINC01248-201ENST00000458264 FANCD2Q9BXW9 1451 aa27.95■■■□□ 2.06
LINC01248-201ENST00000458264 TOP2AP11388 1531 aaKnown RBP27.93■■■□□ 2.06
LINC01248-201ENST00000458264 URB2Q14146 1524 aaKnown RBP27.7■■■□□ 2.02
LINC01248-201ENST00000458264 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.01
LINC01248-201ENST00000458264 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
LINC01248-201ENST00000458264 OSCARQ8IYS5 282 aa27.56■■■□□ 2
LINC01248-201ENST00000458264 PRDM2Q13029 1718 aa27.55■■■□□ 2
LINC01248-201ENST00000458264 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
LINC01248-201ENST00000458264 TOPBP1Q92547 1522 aa27.4■■□□□ 1.98
LINC01248-201ENST00000458264 ABCC8Q09428 1581 aa27.39■■□□□ 1.97
LINC01248-201ENST00000458264 ZNF608Q9ULD9 1512 aaPredicted RBP27.36■■□□□ 1.97
LINC01248-201ENST00000458264 DNMBPQ6XZF7 1577 aa27.29■■□□□ 1.96
LINC01248-201ENST00000458264 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
LINC01248-201ENST00000458264 TARBP1Q13395 1621 aaKnown RBP27.13■■□□□ 1.93
LINC01248-201ENST00000458264 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.93
LINC01248-201ENST00000458264 POLA1P09884 1462 aaPredicted RBP27.12■■□□□ 1.93
LINC01248-201ENST00000458264 RIMBP3CA6NJZ7 1639 aa27.11■■□□□ 1.93
LINC01248-201ENST00000458264 RIMBP3BA6NNM3 1639 aa27.11■■□□□ 1.93
LINC01248-201ENST00000458264 RIMBP3Q9UFD9 1639 aa27.11■■□□□ 1.93
LINC01248-201ENST00000458264 ARHGEF11O15085 1522 aa27.05■■□□□ 1.92
LINC01248-201ENST00000458264 SOGA1O94964 1423 aa27.03■■□□□ 1.92
LINC01248-201ENST00000458264 RAD54L2Q9Y4B4 1467 aa27.02■■□□□ 1.92
LINC01248-201ENST00000458264 FBLN2P98095 1184 aa26.99■■□□□ 1.91
LINC01248-201ENST00000458264 TDRD9Q8NDG6 1382 aaKnown RBP26.97■■□□□ 1.91
LINC01248-201ENST00000458264 CHD1O14646 1710 aa26.95■■□□□ 1.9
LINC01248-201ENST00000458264 FGD5Q6ZNL6 1462 aa26.94■■□□□ 1.9
LINC01248-201ENST00000458264 CYB5RLQ6IPT4 315 aa26.9■■□□□ 1.9
LINC01248-201ENST00000458264 WDR97A6NE52 1622 aa26.9■■□□□ 1.9
LINC01248-201ENST00000458264 CUX1P39880 1505 aa26.9■■□□□ 1.9
LINC01248-201ENST00000458264 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
LINC01248-201ENST00000458264 CHMP7Q8WUX9 453 aaPredicted RBP26.8■■□□□ 1.88
LINC01248-201ENST00000458264 GRIN2BQ13224 1484 aa26.8■■□□□ 1.88
LINC01248-201ENST00000458264 SUPT5HO00267 1087 aaKnown RBP26.79■■□□□ 1.88
LINC01248-201ENST00000458264 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
LINC01248-201ENST00000458264 ARAP1Q96P48 1450 aa26.78■■□□□ 1.88
LINC01248-201ENST00000458264 CLASP1Q7Z460 1538 aa26.7■■□□□ 1.87
LINC01248-201ENST00000458264 SYNJ2O15056 1496 aa26.7■■□□□ 1.87
LINC01248-201ENST00000458264 SYNJ1O43426 1573 aa26.7■■□□□ 1.86
LINC01248-201ENST00000458264 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
LINC01248-201ENST00000458264 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
LINC01248-201ENST00000458264 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
LINC01248-201ENST00000458264 PBRM1Q86U86 1689 aa26.59■■□□□ 1.85
LINC01248-201ENST00000458264 ABCA5Q8WWZ7 1642 aa26.57■■□□□ 1.84
LINC01248-201ENST00000458264 WRNQ14191 1432 aaPredicted RBP eCLIP26.56■■□□□ 1.84
LINC01248-201ENST00000458264 TOP2BQ02880 1626 aa26.46■■□□□ 1.83
LINC01248-201ENST00000458264 BIVM-ERCC5R4GMW8 1640 aa26.44■■□□□ 1.82
LINC01248-201ENST00000458264 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
LINC01248-201ENST00000458264 ADAMTS12P58397 1594 aa26.37■■□□□ 1.81
LINC01248-201ENST00000458264 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
LINC01248-201ENST00000458264 NUP160Q12769 1436 aa26.35■■□□□ 1.81
LINC01248-201ENST00000458264 ERICH3Q5RHP9 1530 aa26.31■■□□□ 1.8
LINC01248-201ENST00000458264 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
LINC01248-201ENST00000458264 ERCC6L2Q5T890 1561 aa26.25■■□□□ 1.79
LINC01248-201ENST00000458264 SHROOM2Q13796 1616 aa26.2■■□□□ 1.78
LINC01248-201ENST00000458264 JPH4Q96JJ6 628 aa26.12■■□□□ 1.77
LINC01248-201ENST00000458264 PRG4Q92954 1404 aaPredicted RBP26.11■■□□□ 1.77
LINC01248-201ENST00000458264 IGF1RP08069 1367 aa26■■□□□ 1.75
LINC01248-201ENST00000458264 RUSC2Q8N2Y8 1516 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms