RNA–Protein interactions for RNA: ENST00000505871.6

SH3D21-205, Transcript of SH3 domain containing 21, humanhuman

TSL 2 BASIC

Gene SH3D21, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-205ENST00000505871 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
SH3D21-205ENST00000505871 CCDC180Q9P1Z9 1646 aa27.59■■■□□ 2.01
SH3D21-205ENST00000505871 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
SH3D21-205ENST00000505871 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
SH3D21-205ENST00000505871 SHROOM4Q9ULL8 1493 aa26.14■■□□□ 1.78
SH3D21-205ENST00000505871 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.77
SH3D21-205ENST00000505871 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
SH3D21-205ENST00000505871 ABCC9O60706 1549 aa25.79■■□□□ 1.72
SH3D21-205ENST00000505871 NACADO15069 1562 aa25.62■■□□□ 1.69
SH3D21-205ENST00000505871 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
SH3D21-205ENST00000505871 RB1CC1Q8TDY2 1594 aa25.32■■□□□ 1.64
SH3D21-205ENST00000505871 SUPT5HO00267 1087 aaKnown RBP25.32■■□□□ 1.64
SH3D21-205ENST00000505871 UNC13AQ9UPW8 1703 aa24.82■■□□□ 1.56
SH3D21-205ENST00000505871 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
SH3D21-205ENST00000505871 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
SH3D21-205ENST00000505871 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.52
SH3D21-205ENST00000505871 BICRAQ9NZM4 1560 aa24.55■■□□□ 1.52
SH3D21-205ENST00000505871 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
SH3D21-205ENST00000505871 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
SH3D21-205ENST00000505871 WIZO95785 1651 aa24.39■■□□□ 1.5
SH3D21-205ENST00000505871 SMARCA4P51532 1647 aa24.38■■□□□ 1.49
SH3D21-205ENST00000505871 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
SH3D21-205ENST00000505871 TOP2AP11388 1531 aaKnown RBP24.16■■□□□ 1.46
SH3D21-205ENST00000505871 PEG3Q9GZU2 1588 aa24.08■■□□□ 1.44
SH3D21-205ENST00000505871 SMARCA2P51531 1590 aa23.94■■□□□ 1.42
SH3D21-205ENST00000505871 CCDC88BA6NC98 1476 aa23.91■■□□□ 1.42
SH3D21-205ENST00000505871 ATAD2BQ9ULI0 1458 aa23.9■■□□□ 1.42
SH3D21-205ENST00000505871 EIF4G1Q04637 1599 aaKnown RBP23.88■■□□□ 1.41
SH3D21-205ENST00000505871 TRIM41Q8WV44 630 aa23.79■■□□□ 1.4
SH3D21-205ENST00000505871 BAZ1BQ9UIG0 1483 aaKnown RBP23.79■■□□□ 1.4
SH3D21-205ENST00000505871 HMGXB3Q12766 1538 aa23.64■■□□□ 1.38
SH3D21-205ENST00000505871 NCAPD3P42695 1498 aa23.64■■□□□ 1.38
SH3D21-205ENST00000505871 ABCC8Q09428 1581 aa23.51■■□□□ 1.35
SH3D21-205ENST00000505871 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
SH3D21-205ENST00000505871 CC2D2AQ9P2K1 1620 aa23.35■■□□□ 1.33
SH3D21-205ENST00000505871 FAM9AQ8IZU1 332 aaPredicted RBP23.35■■□□□ 1.33
SH3D21-205ENST00000505871 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
SH3D21-205ENST00000505871 SYNJ1O43426 1573 aa23.21■■□□□ 1.31
SH3D21-205ENST00000505871 CFTRP13569 1480 aa23.21■■□□□ 1.31
SH3D21-205ENST00000505871 EEA1Q15075 1411 aa23.18■■□□□ 1.3
SH3D21-205ENST00000505871 SOGA1O94964 1423 aa23.13■■□□□ 1.29
SH3D21-205ENST00000505871 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
SH3D21-205ENST00000505871 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
SH3D21-205ENST00000505871 BIVM-ERCC5R4GMW8 1640 aa23.07■■□□□ 1.28
SH3D21-205ENST00000505871 CADPSQ9ULU8 1353 aa23.06■■□□□ 1.28
SH3D21-205ENST00000505871 RUSC2Q8N2Y8 1516 aa23.02■■□□□ 1.28
SH3D21-205ENST00000505871 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
SH3D21-205ENST00000505871 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
SH3D21-205ENST00000505871 CUX1P39880 1505 aa22.96■■□□□ 1.27
SH3D21-205ENST00000505871 GOLGA3Q08378 1498 aa22.86■■□□□ 1.25
SH3D21-205ENST00000505871 KIF21BO75037 1637 aa22.85■■□□□ 1.25
SH3D21-205ENST00000505871 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
SH3D21-205ENST00000505871 CEP164Q9UPV0 1460 aa22.83■■□□□ 1.25
SH3D21-205ENST00000505871 FANCD2Q9BXW9 1451 aa22.81■■□□□ 1.24
SH3D21-205ENST00000505871 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
SH3D21-205ENST00000505871 CEP162Q5TB80 1403 aa22.74■■□□□ 1.23
SH3D21-205ENST00000505871 NESP48681 1621 aa22.74■■□□□ 1.23
SH3D21-205ENST00000505871 PCGF6Q9BYE7 350 aa22.74■■□□□ 1.23
SH3D21-205ENST00000505871 UBTFP17480 764 aaKnown RBP22.73■■□□□ 1.23
SH3D21-205ENST00000505871 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
SH3D21-205ENST00000505871 TRIM26Q12899 539 aaPredicted RBP22.68■■□□□ 1.22
SH3D21-205ENST00000505871 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
SH3D21-205ENST00000505871 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
SH3D21-205ENST00000505871 RAPGEF2Q9Y4G8 1499 aa22.65■■□□□ 1.22
SH3D21-205ENST00000505871 ERICH3Q5RHP9 1530 aa22.64■■□□□ 1.22
SH3D21-205ENST00000505871 DNAJC5BQ9UF47 199 aa22.64■■□□□ 1.21
SH3D21-205ENST00000505871 PRXQ9BXM0 1461 aa22.64■■□□□ 1.21
SH3D21-205ENST00000505871 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
SH3D21-205ENST00000505871 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
SH3D21-205ENST00000505871 CUX2O14529 1486 aa22.58■■□□□ 1.2
SH3D21-205ENST00000505871 POLA1P09884 1462 aaPredicted RBP22.51■■□□□ 1.19
SH3D21-205ENST00000505871 CLIP1P30622 1438 aa22.5■■□□□ 1.19
SH3D21-205ENST00000505871 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
SH3D21-205ENST00000505871 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
SH3D21-205ENST00000505871 KIF21AQ7Z4S6 1674 aa22.48■■□□□ 1.19
SH3D21-205ENST00000505871 IGF1RP08069 1367 aa22.47■■□□□ 1.19
SH3D21-205ENST00000505871 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
SH3D21-205ENST00000505871 WDR97A6NE52 1622 aa22.37■■□□□ 1.17
SH3D21-205ENST00000505871 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
SH3D21-205ENST00000505871 HRCP23327 699 aa22.36■■□□□ 1.17
SH3D21-205ENST00000505871 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
SH3D21-205ENST00000505871 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
SH3D21-205ENST00000505871 MRC2Q9UBG0 1479 aa22.3■■□□□ 1.16
SH3D21-205ENST00000505871 CUL7Q14999 1698 aa22.28■■□□□ 1.16
SH3D21-205ENST00000505871 ABCA5Q8WWZ7 1642 aa22.26■■□□□ 1.15
SH3D21-205ENST00000505871 RANGAP1P46060 587 aaPredicted RBP22.25■■□□□ 1.15
SH3D21-205ENST00000505871 ARAP1Q96P48 1450 aa22.24■■□□□ 1.15
SH3D21-205ENST00000505871 TARBP1Q13395 1621 aaKnown RBP22.23■■□□□ 1.15
SH3D21-205ENST00000505871 GAPVD1Q14C86 1478 aa22.2■■□□□ 1.14
SH3D21-205ENST00000505871 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
SH3D21-205ENST00000505871 ARHGAP35Q9NRY4 1499 aa22.18■■□□□ 1.14
SH3D21-205ENST00000505871 WDR62O43379 1518 aa22.17■■□□□ 1.14
SH3D21-205ENST00000505871 APLP2Q06481 763 aa22.14■■□□□ 1.13
SH3D21-205ENST00000505871 TTBK1Q5TCY1 1321 aaPredicted RBP22.1■■□□□ 1.13
SH3D21-205ENST00000505871 ERCC6Q03468 1493 aa22.09■■□□□ 1.13
SH3D21-205ENST00000505871 CTTNBP2Q8WZ74 1663 aa22.08■■□□□ 1.13
SH3D21-205ENST00000505871 IFT140Q96RY7 1462 aa22.08■■□□□ 1.12
SH3D21-205ENST00000505871 PBRM1Q86U86 1689 aa22.05■■□□□ 1.12
SH3D21-205ENST00000505871 THOC2Q8NI27 1593 aaKnown RBP22.03■■□□□ 1.12
SH3D21-205ENST00000505871 EFCAB5A4FU69 1503 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms