RNA–Protein interactions for RNA: ENST00000599386.5

PAK4-208, Transcript of p21 (RAC1) activated kinase 4, humanhuman

TSL 1 (best) BASIC

Gene PAK4, Length 5,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK4-208ENST00000599386 DCAF8L2P0C7V8 631 aa26.03■■□□□ 1.76
PAK4-208ENST00000599386 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
PAK4-208ENST00000599386 SUPT5HO00267 1087 aaKnown RBP24.77■■□□□ 1.56
PAK4-208ENST00000599386 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
PAK4-208ENST00000599386 FAM9AQ8IZU1 332 aaPredicted RBP24.16■■□□□ 1.46
PAK4-208ENST00000599386 PELP1Q8IZL8 1130 aaKnown RBP24.08■■□□□ 1.45
PAK4-208ENST00000599386 APLP2Q06481 763 aa23.94■■□□□ 1.42
PAK4-208ENST00000599386 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
PAK4-208ENST00000599386 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
PAK4-208ENST00000599386 PCGF6Q9BYE7 350 aa23.17■■□□□ 1.3
PAK4-208ENST00000599386 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
PAK4-208ENST00000599386 CENPBP07199 599 aaPredicted RBP23.1■■□□□ 1.29
PAK4-208ENST00000599386 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
PAK4-208ENST00000599386 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
PAK4-208ENST00000599386 ERICH6Q7L0X2 663 aa22.92■■□□□ 1.26
PAK4-208ENST00000599386 RANGAP1P46060 587 aaPredicted RBP22.88■■□□□ 1.25
PAK4-208ENST00000599386 ATP1B4Q9UN42 357 aaPredicted RBP22.85■■□□□ 1.25
PAK4-208ENST00000599386 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
PAK4-208ENST00000599386 NEFLP07196 543 aa22.63■■□□□ 1.21
PAK4-208ENST00000599386 TRIM26Q12899 539 aaPredicted RBP22.44■■□□□ 1.18
PAK4-208ENST00000599386 MYT1Q01538 1121 aa22.41■■□□□ 1.18
PAK4-208ENST00000599386 MYT1LQ9UL68 1186 aa22.35■■□□□ 1.17
PAK4-208ENST00000599386 YTHDC1Q96MU7 727 aaKnown RBP22.32■■□□□ 1.16
PAK4-208ENST00000599386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
PAK4-208ENST00000599386 HNRNPUL2Q1KMD3 747 aaKnown RBP22.19■■□□□ 1.14
PAK4-208ENST00000599386 PPARGC1BQ86YN6 1023 aaKnown RBP22.15■■□□□ 1.14
PAK4-208ENST00000599386 HRCP23327 699 aa22.07■■□□□ 1.12
PAK4-208ENST00000599386 ITGAEP38570 1179 aa21.99■■□□□ 1.11
PAK4-208ENST00000599386 DAXXQ9UER7 740 aaPredicted RBP21.99■■□□□ 1.11
PAK4-208ENST00000599386 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
PAK4-208ENST00000599386 POLR3GLQ9BT43 218 aa21.89■■□□□ 1.09
PAK4-208ENST00000599386 LOC105371045A0A1W2PR82 267 aa21.85■■□□□ 1.09
PAK4-208ENST00000599386 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
PAK4-208ENST00000599386 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
PAK4-208ENST00000599386 DIEXFQ68CQ4 756 aaKnown RBP21.58■■□□□ 1.05
PAK4-208ENST00000599386 ABCC9O60706 1549 aa21.58■■□□□ 1.04
PAK4-208ENST00000599386 TRIM52Q96A61 297 aa21.5■■□□□ 1.03
PAK4-208ENST00000599386 ZNF316A6NFI3 1004 aaPredicted RBP21.49■■□□□ 1.03
PAK4-208ENST00000599386 CNGB1Q14028 1251 aaPredicted RBP21.47■■□□□ 1.03
PAK4-208ENST00000599386 RTL5Q5HYW3 569 aaPredicted RBP21.44■■□□□ 1.02
PAK4-208ENST00000599386 PABPN1Q86U42 306 aaKnown RBP eCLIP21.42■■□□□ 1.02
PAK4-208ENST00000599386 CLSPNQ9HAW4 1339 aa21.41■■□□□ 1.02
PAK4-208ENST00000599386 ZBTB47Q9UFB7 747 aaPredicted RBP21.34■■□□□ 1.01
PAK4-208ENST00000599386 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
PAK4-208ENST00000599386 ANP32CO43423 234 aa21.33■■□□□ 1
PAK4-208ENST00000599386 NEFMP07197 916 aa21.23■□□□□ 0.99
PAK4-208ENST00000599386 FBLN2P98095 1184 aa21.18■□□□□ 0.98
PAK4-208ENST00000599386 CDK11AQ9UQ88 783 aaPredicted RBP21.14■□□□□ 0.98
PAK4-208ENST00000599386 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
PAK4-208ENST00000599386 BCANQ96GW7 911 aa21.12■□□□□ 0.97
PAK4-208ENST00000599386 ESF1Q9H501 851 aaKnown RBP21.09■□□□□ 0.97
PAK4-208ENST00000599386 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
PAK4-208ENST00000599386 GTF3C3Q9Y5Q9 886 aa21.02■□□□□ 0.96
PAK4-208ENST00000599386 CANXP27824 592 aaKnown RBP21.02■□□□□ 0.96
PAK4-208ENST00000599386 SCRIBQ14160 1630 aa21■□□□□ 0.95
PAK4-208ENST00000599386 SLC24A1O60721 1099 aa20.98■□□□□ 0.95
PAK4-208ENST00000599386 ZCCHC6Q5VYS8 1495 aaKnown RBP20.96■□□□□ 0.95
PAK4-208ENST00000599386 NPM1P06748 294 aaKnown RBP eCLIP20.92■□□□□ 0.94
PAK4-208ENST00000599386 CCDC180Q9P1Z9 1646 aa20.91■□□□□ 0.94
PAK4-208ENST00000599386 P3H3Q8IVL6 736 aa20.9■□□□□ 0.94
PAK4-208ENST00000599386 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
PAK4-208ENST00000599386 ZNF777Q9ULD5 760 aaPredicted RBP20.83■□□□□ 0.93
PAK4-208ENST00000599386 ANP32AP39687 249 aaKnown RBP20.82■□□□□ 0.92
PAK4-208ENST00000599386 TONSLQ96HA7 1378 aa20.81■□□□□ 0.92
PAK4-208ENST00000599386 ACIN1Q9UKV3 1341 aaKnown RBP20.81■□□□□ 0.92
PAK4-208ENST00000599386 STAG3Q9UJ98 1225 aa20.81■□□□□ 0.92
PAK4-208ENST00000599386 ARID3CA6NKF2 412 aa20.77■□□□□ 0.92
PAK4-208ENST00000599386 CHGAP10645 457 aaKnown RBP20.59■□□□□ 0.89
PAK4-208ENST00000599386 UPF2Q9HAU5 1272 aaKnown RBP20.56■□□□□ 0.88
PAK4-208ENST00000599386 RB1CC1Q8TDY2 1594 aa20.55■□□□□ 0.88
PAK4-208ENST00000599386 BCL11AQ9H165 835 aa20.54■□□□□ 0.88
PAK4-208ENST00000599386 ANP32BQ92688 251 aaKnown RBP20.53■□□□□ 0.88
PAK4-208ENST00000599386 FKBP8Q14318 412 aa20.52■□□□□ 0.88
PAK4-208ENST00000599386 NPM2Q86SE8 214 aaKnown RBP20.51■□□□□ 0.87
PAK4-208ENST00000599386 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.51■□□□□ 0.87
PAK4-208ENST00000599386 HNRNPUQ00839 825 aaKnown RBP eCLIP20.5■□□□□ 0.87
PAK4-208ENST00000599386 EEA1Q15075 1411 aa20.5■□□□□ 0.87
PAK4-208ENST00000599386 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
PAK4-208ENST00000599386 HSP90AA1P07900 732 aaKnown RBP20.44■□□□□ 0.86
PAK4-208ENST00000599386 CLIP1P30622 1438 aa20.44■□□□□ 0.86
PAK4-208ENST00000599386 FAM9BQ8IZU0 186 aa20.44■□□□□ 0.86
PAK4-208ENST00000599386 DDX10Q13206 875 aaKnown RBP20.44■□□□□ 0.86
PAK4-208ENST00000599386 TSPY4P0CV99 314 aa20.43■□□□□ 0.86
PAK4-208ENST00000599386 TSPY10P0CW01 314 aa20.43■□□□□ 0.86
PAK4-208ENST00000599386 GOLGA3Q08378 1498 aa20.43■□□□□ 0.86
PAK4-208ENST00000599386 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
PAK4-208ENST00000599386 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
PAK4-208ENST00000599386 TMC1Q8TDI8 760 aa20.41■□□□□ 0.86
PAK4-208ENST00000599386 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
PAK4-208ENST00000599386 CHIC2Q9UKJ5 165 aa20.39■□□□□ 0.85
PAK4-208ENST00000599386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.36■□□□□ 0.85
PAK4-208ENST00000599386 CCDC136Q96JN2 1154 aa20.33■□□□□ 0.84
PAK4-208ENST00000599386 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
PAK4-208ENST00000599386 NACADO15069 1562 aa20.32■□□□□ 0.84
PAK4-208ENST00000599386 MRS2Q9HD23 443 aa20.3■□□□□ 0.84
PAK4-208ENST00000599386 EIF4G2P78344 907 aaKnown RBP eCLIP20.26■□□□□ 0.834e-7■■■■■ 34.5
PAK4-208ENST00000599386 CEP162Q5TB80 1403 aa20.25■□□□□ 0.83
PAK4-208ENST00000599386 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
PAK4-208ENST00000599386 MYH16Q9H6N6 1097 aa20.23■□□□□ 0.83
PAK4-208ENST00000599386 KDM2AQ9Y2K7 1162 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms