Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HLCSP50747 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLCSP50747 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HLCSP50747 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLCSP50747 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HLCSP50747 AC131212.1-201ENST00000613771 668 ntBASIC21.59■■□□□ 1.05
HLCSP50747 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
HLCSP50747 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
HLCSP50747 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
HLCSP50747 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLCSP50747 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HLCSP50747 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLCSP50747 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLCSP50747 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLCSP50747 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.58■■□□□ 1.05
HLCSP50747 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.58■■□□□ 1.05
HLCSP50747 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.58■■□□□ 1.05
HLCSP50747 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
HLCSP50747 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HLCSP50747 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HLCSP50747 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
HLCSP50747 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.57■■□□□ 1.04
HLCSP50747 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLCSP50747 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.57■■□□□ 1.04
HLCSP50747 AC092028.1-203ENST00000608262 953 ntBASIC21.57■■□□□ 1.04
HLCSP50747 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.57■■□□□ 1.04
HLCSP50747 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLCSP50747 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
HLCSP50747 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
HLCSP50747 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLCSP50747 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HLCSP50747 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLCSP50747 AC090877.2-201ENST00000558441 1738 ntBASIC21.56■■□□□ 1.04
HLCSP50747 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.56■■□□□ 1.04
HLCSP50747 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.56■■□□□ 1.04
HLCSP50747 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLCSP50747 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.56■■□□□ 1.04
HLCSP50747 UNC93B8-201ENST00000511903 705 ntBASIC21.56■■□□□ 1.04
HLCSP50747 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.56■■□□□ 1.04
HLCSP50747 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
HLCSP50747 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HLCSP50747 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.56■■□□□ 1.04
HLCSP50747 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HLCSP50747 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.55■■□□□ 1.04
HLCSP50747 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.55■■□□□ 1.04
HLCSP50747 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLCSP50747 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HLCSP50747 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.55■■□□□ 1.04
HLCSP50747 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HLCSP50747 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLCSP50747 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLCSP50747 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLCSP50747 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.54■■□□□ 1.04
HLCSP50747 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.54■■□□□ 1.04
HLCSP50747 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.54■■□□□ 1.04
HLCSP50747 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
HLCSP50747 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HLCSP50747 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.54■■□□□ 1.04
HLCSP50747 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLCSP50747 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.54■■□□□ 1.04
HLCSP50747 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.54■■□□□ 1.04
HLCSP50747 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLCSP50747 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLCSP50747 LINC00565-201ENST00000562710 2331 ntBASIC21.54■■□□□ 1.04
HLCSP50747 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HLCSP50747 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
HLCSP50747 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.53■■□□□ 1.04
HLCSP50747 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.53■■□□□ 1.04
HLCSP50747 TSPY9P-201ENST00000440215 945 ntBASIC21.53■■□□□ 1.04
HLCSP50747 TSPY11P-201ENST00000442607 1045 ntBASIC21.53■■□□□ 1.04
HLCSP50747 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.53■■□□□ 1.04
HLCSP50747 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLCSP50747 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLCSP50747 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.52■■□□□ 1.04
HLCSP50747 KRT16P3-201ENST00000439127 1283 ntBASIC21.52■■□□□ 1.04
HLCSP50747 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HLCSP50747 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLCSP50747 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLCSP50747 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLCSP50747 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLCSP50747 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLCSP50747 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
HLCSP50747 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLCSP50747 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.51■■□□□ 1.03
HLCSP50747 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.51■■□□□ 1.03
HLCSP50747 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLCSP50747 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.5■■□□□ 1.03
HLCSP50747 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLCSP50747 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.5■■□□□ 1.03
HLCSP50747 AF131216.4-201ENST00000638924 1588 ntBASIC21.5■■□□□ 1.03
HLCSP50747 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HLCSP50747 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.5■■□□□ 1.03
HLCSP50747 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.5■■□□□ 1.03
HLCSP50747 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.5■■□□□ 1.03
HLCSP50747 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.5■■□□□ 1.03
HLCSP50747 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLCSP50747 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLCSP50747 EP400NL-214ENST00000641289 2402 ntBASIC21.49■■□□□ 1.03
HLCSP50747 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLCSP50747 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms