RNA–Protein interactions for RNA: ENST00000257549.8

SDS-201, Transcript of serine dehydratase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SDS, Length 1,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDS-201ENST00000257549 NISCHQ9Y2I1 1504 aa54.83■■■■■ 6.37
SDS-201ENST00000257549 CCDC180Q9P1Z9 1646 aa48.14■■■■■ 5.3
SDS-201ENST00000257549 ZCCHC6Q5VYS8 1495 aaKnown RBP46■■■■■ 4.95
SDS-201ENST00000257549 ABCC9O60706 1549 aa45.73■■■■■ 4.91
SDS-201ENST00000257549 DCAF1Q9Y4B6 1507 aa45.37■■■■■ 4.85
SDS-201ENST00000257549 DCAF8L2P0C7V8 631 aa45.21■■■■■ 4.83
SDS-201ENST00000257549 MYO15BQ96JP2 1530 aa44.99■■■■■ 4.79
SDS-201ENST00000257549 NACADO15069 1562 aa44.84■■■■■ 4.77
SDS-201ENST00000257549 RB1CC1Q8TDY2 1594 aa44.57■■■■■ 4.73
SDS-201ENST00000257549 SHROOM4Q9ULL8 1493 aa44.3■■■■■ 4.68
SDS-201ENST00000257549 SCRIBQ14160 1630 aa44.12■■■■■ 4.65
SDS-201ENST00000257549 UNC13AQ9UPW8 1703 aa43.8■■■■■ 4.6
SDS-201ENST00000257549 BICRAQ9NZM4 1560 aa43.25■■■■■ 4.51
SDS-201ENST00000257549 PABPN1Q86U42 306 aaKnown RBP eCLIP42.95■■■■■ 4.47
SDS-201ENST00000257549 CECR2Q9BXF3 1484 aa42.6■■■■■ 4.41
SDS-201ENST00000257549 BAZ1AQ9NRL2 1556 aaPredicted RBP42.38■■■■■ 4.38
SDS-201ENST00000257549 SUPT5HO00267 1087 aaKnown RBP42.37■■■■■ 4.37
SDS-201ENST00000257549 MROH2BQ7Z745 1585 aa42.33■■■■■ 4.37
SDS-201ENST00000257549 RSF1Q96T23 1441 aaPredicted RBP42.32■■■■■ 4.36
SDS-201ENST00000257549 SMARCA4P51532 1647 aa42.29■■■■■ 4.36
SDS-201ENST00000257549 WIZO95785 1651 aa42.02■■■■■ 4.32
SDS-201ENST00000257549 EIF4G1Q04637 1599 aaKnown RBP41.96■■■■■ 4.31
SDS-201ENST00000257549 PEG3Q9GZU2 1588 aa41.8■■■■■ 4.28
SDS-201ENST00000257549 SMARCA2P51531 1590 aa41.64■■■■■ 4.26
SDS-201ENST00000257549 ATAD2BQ9ULI0 1458 aa41.62■■■■■ 4.25
SDS-201ENST00000257549 TOP2AP11388 1531 aaKnown RBP41.56■■■■■ 4.24
SDS-201ENST00000257549 CC2D2AQ9P2K1 1620 aa41.45■■■■■ 4.23
SDS-201ENST00000257549 BAZ1BQ9UIG0 1483 aaKnown RBP41.38■■■■■ 4.21
SDS-201ENST00000257549 NCAPD3P42695 1498 aa41.33■■■■■ 4.21
SDS-201ENST00000257549 HMGXB3Q12766 1538 aa41.32■■■■■ 4.21
SDS-201ENST00000257549 CCDC88BA6NC98 1476 aa41.06■■■■■ 4.16
SDS-201ENST00000257549 DNAJC5BQ9UF47 199 aa40.63■■■■■ 4.09
SDS-201ENST00000257549 CHIC1Q5VXU3 224 aa40.37■■■■■ 4.05
SDS-201ENST00000257549 CFTRP13569 1480 aa40.31■■■■■ 4.04
SDS-201ENST00000257549 PRDM2Q13029 1718 aa40.29■■■■■ 4.04
SDS-201ENST00000257549 CADPSQ9ULU8 1353 aa40.21■■■■■ 4.03
SDS-201ENST00000257549 ABCC8Q09428 1581 aa40.1■■■■■ 4.01
SDS-201ENST00000257549 LAMC3Q9Y6N6 1575 aa40.07■■■■■ 4.01
SDS-201ENST00000257549 NESP48681 1621 aa40.03■■■■■ 4
SDS-201ENST00000257549 TRIM41Q8WV44 630 aa39.88■■■■□ 3.97
SDS-201ENST00000257549 WRNQ14191 1432 aaPredicted RBP eCLIP39.85■■■■□ 3.97
SDS-201ENST00000257549 FANCD2Q9BXW9 1451 aa39.81■■■■□ 3.96
SDS-201ENST00000257549 SYNJ1O43426 1573 aa39.79■■■■□ 3.96
SDS-201ENST00000257549 KIF21AQ7Z4S6 1674 aa39.68■■■■□ 3.94
SDS-201ENST00000257549 PDS5BQ9NTI5 1447 aa39.68■■■■□ 3.94
SDS-201ENST00000257549 BIVM-ERCC5R4GMW8 1640 aa39.68■■■■□ 3.94
SDS-201ENST00000257549 TOP2BQ02880 1626 aa39.66■■■■□ 3.94
SDS-201ENST00000257549 CUX1P39880 1505 aa39.63■■■■□ 3.93
SDS-201ENST00000257549 CEP164Q9UPV0 1460 aa39.62■■■■□ 3.93
SDS-201ENST00000257549 DNMBPQ6XZF7 1577 aa39.44■■■■□ 3.9
SDS-201ENST00000257549 URB2Q14146 1524 aaKnown RBP39.35■■■■□ 3.89
SDS-201ENST00000257549 TOPBP1Q92547 1522 aa39.35■■■■□ 3.89
SDS-201ENST00000257549 ERCC6Q03468 1493 aa39.25■■■■□ 3.87
SDS-201ENST00000257549 FGD5Q6ZNL6 1462 aa39.25■■■■□ 3.87
SDS-201ENST00000257549 MRC2Q9UBG0 1479 aa39.24■■■■□ 3.87
SDS-201ENST00000257549 SOGA1O94964 1423 aa39.19■■■■□ 3.86
SDS-201ENST00000257549 FAM9AQ8IZU1 332 aaPredicted RBP39.12■■■■□ 3.85
SDS-201ENST00000257549 POLA1P09884 1462 aaPredicted RBP39.12■■■■□ 3.85
SDS-201ENST00000257549 THOC2Q8NI27 1593 aaKnown RBP39.12■■■■□ 3.85
SDS-201ENST00000257549 WDR62O43379 1518 aa39.1■■■■□ 3.85
SDS-201ENST00000257549 RUSC2Q8N2Y8 1516 aa39.09■■■■□ 3.85
SDS-201ENST00000257549 EEA1Q15075 1411 aa39.06■■■■□ 3.84
SDS-201ENST00000257549 RAD54L2Q9Y4B4 1467 aa38.95■■■■□ 3.83
SDS-201ENST00000257549 WDR97A6NE52 1622 aa38.94■■■■□ 3.82
SDS-201ENST00000257549 ABCA10Q8WWZ4 1543 aa38.89■■■■□ 3.82
SDS-201ENST00000257549 CUX2O14529 1486 aa38.88■■■■□ 3.81
SDS-201ENST00000257549 KIF27Q86VH2 1401 aa38.87■■■■□ 3.81
SDS-201ENST00000257549 TARBP1Q13395 1621 aaKnown RBP38.85■■■■□ 3.81
SDS-201ENST00000257549 CSRNP3Q8WYN3 585 aa38.81■■■■□ 3.8
SDS-201ENST00000257549 LOC105371045A0A1W2PR82 267 aa38.77■■■■□ 3.8
SDS-201ENST00000257549 ABCA5Q8WWZ7 1642 aa38.69■■■■□ 3.78
SDS-201ENST00000257549 IFT140Q96RY7 1462 aa38.69■■■■□ 3.78
SDS-201ENST00000257549 KIF21BO75037 1637 aa38.67■■■■□ 3.78
SDS-201ENST00000257549 TDRD9Q8NDG6 1382 aaKnown RBP38.56■■■■□ 3.76
SDS-201ENST00000257549 EHMT2Q96KQ7 1210 aa38.56■■■■□ 3.76
SDS-201ENST00000257549 IGF1RP08069 1367 aa38.53■■■■□ 3.76
SDS-201ENST00000257549 GAPVD1Q14C86 1478 aa38.53■■■■□ 3.76
SDS-201ENST00000257549 PRXQ9BXM0 1461 aa38.53■■■■□ 3.76
SDS-201ENST00000257549 GOLGA3Q08378 1498 aa38.52■■■■□ 3.76
SDS-201ENST00000257549 PBRM1Q86U86 1689 aa38.5■■■■□ 3.75
SDS-201ENST00000257549 ZNF608Q9ULD9 1512 aaPredicted RBP38.48■■■■□ 3.75
SDS-201ENST00000257549 ERICH3Q5RHP9 1530 aa38.47■■■■□ 3.75
SDS-201ENST00000257549 RAPGEF2Q9Y4G8 1499 aa38.45■■■■□ 3.75
SDS-201ENST00000257549 CUL7Q14999 1698 aa38.44■■■■□ 3.74
SDS-201ENST00000257549 EIF4G3O43432 1585 aaKnown RBP38.43■■■■□ 3.74
SDS-201ENST00000257549 AQRO60306 1485 aaKnown RBP eCLIP38.41■■■■□ 3.74
SDS-201ENST00000257549 CARMIL1Q5VZK9 1371 aa38.34■■■■□ 3.73
SDS-201ENST00000257549 GRIN2BQ13224 1484 aa38.3■■■■□ 3.72
SDS-201ENST00000257549 TNIKQ9UKE5 1360 aa38.27■■■■□ 3.72
SDS-201ENST00000257549 UBTFP17480 764 aaKnown RBP38.24■■■■□ 3.71
SDS-201ENST00000257549 ADAMTS12P58397 1594 aa38.21■■■■□ 3.71
SDS-201ENST00000257549 SNAPC4Q5SXM2 1469 aa38.11■■■■□ 3.69
SDS-201ENST00000257549 FHAD1B1AJZ9 1412 aa38.1■■■■□ 3.69
SDS-201ENST00000257549 CEP162Q5TB80 1403 aa38.06■■■■□ 3.68
SDS-201ENST00000257549 MAGI1Q96QZ7 1491 aaPredicted RBP38.05■■■■□ 3.68
SDS-201ENST00000257549 CTTNBP2Q8WZ74 1663 aa38.01■■■■□ 3.68
SDS-201ENST00000257549 SYNJ2O15056 1496 aa37.89■■■■□ 3.66
SDS-201ENST00000257549 CLIP1P30622 1438 aa37.85■■■■□ 3.65
SDS-201ENST00000257549 GRIN2AQ12879 1464 aa37.85■■■■□ 3.65
SDS-201ENST00000257549 RANGAP1P46060 587 aaPredicted RBP37.73■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms