Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 AC019193.1-201ENST00000506678 823 ntBASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 AL022313.4-201ENST00000562756 2046 ntBASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 AC128714.1-201ENST00000637035 887 ntBASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.83■□□□□ 0.28
NEDD1Q8NHV4 AC012617.1-204ENST00000586340 2305 ntBASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 AL513477.1-201ENST00000602865 2407 ntBASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.82■□□□□ 0.28
NEDD1Q8NHV4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 AC007952.5-201ENST00000572818 1486 ntBASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 HSPA8P5-201ENST00000456928 2069 ntBASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 AC026316.1-201ENST00000398900 414 ntBASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.81■□□□□ 0.28
NEDD1Q8NHV4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms