RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 NISCHQ9Y2I1 1504 aa29.34■■■□□ 2.29
R3HDM2-201ENST00000347140 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
R3HDM2-201ENST00000347140 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
R3HDM2-201ENST00000347140 HRCP23327 699 aa25.64■■□□□ 1.69
R3HDM2-201ENST00000347140 PCGF6Q9BYE7 350 aa25.53■■□□□ 1.68
R3HDM2-201ENST00000347140 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
R3HDM2-201ENST00000347140 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
R3HDM2-201ENST00000347140 PPARGC1BQ86YN6 1023 aaKnown RBP25.08■■□□□ 1.6
R3HDM2-201ENST00000347140 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
R3HDM2-201ENST00000347140 ZCCHC6Q5VYS8 1495 aaKnown RBP24.83■■□□□ 1.56
R3HDM2-201ENST00000347140 LOC105371045A0A1W2PR82 267 aa24.75■■□□□ 1.55
R3HDM2-201ENST00000347140 TRIM26Q12899 539 aaPredicted RBP24.73■■□□□ 1.55
R3HDM2-201ENST00000347140 PELP1Q8IZL8 1130 aaKnown RBP24.65■■□□□ 1.54
R3HDM2-201ENST00000347140 ZEB1P37275 1124 aaPredicted RBP24.65■■□□□ 1.54
R3HDM2-201ENST00000347140 DCAF1Q9Y4B6 1507 aa24.6■■□□□ 1.53
R3HDM2-201ENST00000347140 CCDC180Q9P1Z9 1646 aa24.38■■□□□ 1.49
R3HDM2-201ENST00000347140 FAM9AQ8IZU1 332 aaPredicted RBP24.34■■□□□ 1.49
R3HDM2-201ENST00000347140 EHMT2Q96KQ7 1210 aa24.33■■□□□ 1.48
R3HDM2-201ENST00000347140 TRIM41Q8WV44 630 aa24.3■■□□□ 1.48
R3HDM2-201ENST00000347140 CCER1Q8TC90 406 aaPredicted RBP23.96■■□□□ 1.43
R3HDM2-201ENST00000347140 SCAF1Q9H7N4 1312 aaKnown RBP23.94■■□□□ 1.42
R3HDM2-201ENST00000347140 CENPBP07199 599 aaPredicted RBP23.92■■□□□ 1.42
R3HDM2-201ENST00000347140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
R3HDM2-201ENST00000347140 MYT1Q01538 1121 aa23.73■■□□□ 1.39
R3HDM2-201ENST00000347140 ACIN1Q9UKV3 1341 aaKnown RBP23.7■■□□□ 1.38
R3HDM2-201ENST00000347140 TTBK1Q5TCY1 1321 aaPredicted RBP23.69■■□□□ 1.38
R3HDM2-201ENST00000347140 DIEXFQ68CQ4 756 aaKnown RBP23.62■■□□□ 1.37
R3HDM2-201ENST00000347140 GTF3C3Q9Y5Q9 886 aa23.57■■□□□ 1.36
R3HDM2-201ENST00000347140 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
R3HDM2-201ENST00000347140 NEUROD1Q13562 356 aa23.53■■□□□ 1.36
R3HDM2-201ENST00000347140 ABCC9O60706 1549 aa23.51■■□□□ 1.35
R3HDM2-201ENST00000347140 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
R3HDM2-201ENST00000347140 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
R3HDM2-201ENST00000347140 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
R3HDM2-201ENST00000347140 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
R3HDM2-201ENST00000347140 ZNF316A6NFI3 1004 aaPredicted RBP23.21■■□□□ 1.31
R3HDM2-201ENST00000347140 APLP2Q06481 763 aa23.14■■□□□ 1.29
R3HDM2-201ENST00000347140 HNRNPUL2Q1KMD3 747 aaKnown RBP23.05■■□□□ 1.28
R3HDM2-201ENST00000347140 CECR2Q9BXF3 1484 aa22.96■■□□□ 1.27
R3HDM2-201ENST00000347140 CEP162Q5TB80 1403 aa22.91■■□□□ 1.26
R3HDM2-201ENST00000347140 CSRNP3Q8WYN3 585 aa22.87■■□□□ 1.25
R3HDM2-201ENST00000347140 MROH2BQ7Z745 1585 aa22.87■■□□□ 1.25
R3HDM2-201ENST00000347140 MIER1Q8N108 512 aa22.86■■□□□ 1.25
R3HDM2-201ENST00000347140 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
R3HDM2-201ENST00000347140 TNIKQ9UKE5 1360 aa22.77■■□□□ 1.24
R3HDM2-201ENST00000347140 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
R3HDM2-201ENST00000347140 WIZO95785 1651 aa22.73■■□□□ 1.23
R3HDM2-201ENST00000347140 NACADO15069 1562 aa22.68■■□□□ 1.22
R3HDM2-201ENST00000347140 EEA1Q15075 1411 aa22.66■■□□□ 1.22
R3HDM2-201ENST00000347140 CCDC88BA6NC98 1476 aa22.64■■□□□ 1.22
R3HDM2-201ENST00000347140 SOGA1O94964 1423 aa22.63■■□□□ 1.21
R3HDM2-201ENST00000347140 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
R3HDM2-201ENST00000347140 CLSPNQ9HAW4 1339 aa22.6■■□□□ 1.21
R3HDM2-201ENST00000347140 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
R3HDM2-201ENST00000347140 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.21
R3HDM2-201ENST00000347140 CLIP1P30622 1438 aa22.48■■□□□ 1.19
R3HDM2-201ENST00000347140 NEFLP07196 543 aa22.41■■□□□ 1.18
R3HDM2-201ENST00000347140 TOP2AP11388 1531 aaKnown RBP22.4■■□□□ 1.18
R3HDM2-201ENST00000347140 CEP164Q9UPV0 1460 aa22.38■■□□□ 1.17
R3HDM2-201ENST00000347140 ITGAEP38570 1179 aa22.38■■□□□ 1.17
R3HDM2-201ENST00000347140 SUPT16HQ9Y5B9 1047 aaKnown RBP22.38■■□□□ 1.17
R3HDM2-201ENST00000347140 RUSC2Q8N2Y8 1516 aa22.35■■□□□ 1.17
R3HDM2-201ENST00000347140 BCANQ96GW7 911 aa22.32■■□□□ 1.16
R3HDM2-201ENST00000347140 VPS8Q8N3P4 1428 aa22.28■■□□□ 1.16
R3HDM2-201ENST00000347140 SMARCA2P51531 1590 aa22.23■■□□□ 1.15
R3HDM2-201ENST00000347140 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
R3HDM2-201ENST00000347140 EIF4G1Q04637 1599 aaKnown RBP22.21■■□□□ 1.15
R3HDM2-201ENST00000347140 ANP32EQ9BTT0 268 aa22.2■■□□□ 1.14
R3HDM2-201ENST00000347140 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
R3HDM2-201ENST00000347140 FKBP8Q14318 412 aa22.14■■□□□ 1.13
R3HDM2-201ENST00000347140 ERICH6Q7L0X2 663 aa22.13■■□□□ 1.13
R3HDM2-201ENST00000347140 TSHZ2Q9NRE2 1034 aa22.13■■□□□ 1.13
R3HDM2-201ENST00000347140 DHX57Q6P158 1386 aaKnown RBP22.08■■□□□ 1.12
R3HDM2-201ENST00000347140 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
R3HDM2-201ENST00000347140 DDX10Q13206 875 aaKnown RBP22.03■■□□□ 1.12
R3HDM2-201ENST00000347140 BAZ1BQ9UIG0 1483 aaKnown RBP22.02■■□□□ 1.12
R3HDM2-201ENST00000347140 RAPGEF2Q9Y4G8 1499 aa22.01■■□□□ 1.11
R3HDM2-201ENST00000347140 ANP32CO43423 234 aa21.99■■□□□ 1.11
R3HDM2-201ENST00000347140 KIF21BO75037 1637 aa21.99■■□□□ 1.11
R3HDM2-201ENST00000347140 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
R3HDM2-201ENST00000347140 KANK4Q5T7N3 995 aaPredicted RBP21.96■■□□□ 1.11
R3HDM2-201ENST00000347140 CCNB3Q8WWL7 1395 aa21.9■■□□□ 1.1
R3HDM2-201ENST00000347140 TRIM52Q96A61 297 aa21.88■■□□□ 1.09
R3HDM2-201ENST00000347140 KCNH8Q96L42 1107 aa21.87■■□□□ 1.09
R3HDM2-201ENST00000347140 BCL11AQ9H165 835 aa21.85■■□□□ 1.09
R3HDM2-201ENST00000347140 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
R3HDM2-201ENST00000347140 CDK11AQ9UQ88 783 aaPredicted RBP21.8■■□□□ 1.08
R3HDM2-201ENST00000347140 HIRIP3Q9BW71 556 aaPredicted RBP21.77■■□□□ 1.08
R3HDM2-201ENST00000347140 RBM19Q9Y4C8 960 aaKnown RBP21.77■■□□□ 1.08
R3HDM2-201ENST00000347140 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
R3HDM2-201ENST00000347140 SIN3AQ96ST3 1273 aa21.75■■□□□ 1.07
R3HDM2-201ENST00000347140 KIF27Q86VH2 1401 aa21.71■■□□□ 1.07
R3HDM2-201ENST00000347140 RRBP1Q9P2E9 1410 aaKnown RBP21.68■■□□□ 1.06
R3HDM2-201ENST00000347140 SETD5Q9C0A6 1442 aa21.67■■□□□ 1.06
R3HDM2-201ENST00000347140 CCER2I3L3R5 266 aa21.67■■□□□ 1.06
R3HDM2-201ENST00000347140 HNRNPUQ00839 825 aaKnown RBP eCLIP21.67■■□□□ 1.06
R3HDM2-201ENST00000347140 TONSLQ96HA7 1378 aa21.67■■□□□ 1.06
R3HDM2-201ENST00000347140 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
R3HDM2-201ENST00000347140 P3H3Q8IVL6 736 aa21.63■■□□□ 1.05
R3HDM2-201ENST00000347140 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms