RNA–Protein interactions for RNA: ENST00000578576.1

HS3ST3A1-202, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 3A1, humanhuman

TSL 3 BASIC

Gene HS3ST3A1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1-202ENST00000578576 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
HS3ST3A1-202ENST00000578576 ABCC9O60706 1549 aa31.23■■■□□ 2.59
HS3ST3A1-202ENST00000578576 CCDC180Q9P1Z9 1646 aa31.12■■■□□ 2.57
HS3ST3A1-202ENST00000578576 DNAJC5BQ9UF47 199 aa29.85■■■□□ 2.37
HS3ST3A1-202ENST00000578576 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
HS3ST3A1-202ENST00000578576 RB1CC1Q8TDY2 1594 aa29.51■■■□□ 2.31
HS3ST3A1-202ENST00000578576 NACADO15069 1562 aa29.36■■■□□ 2.29
HS3ST3A1-202ENST00000578576 MYO15BQ96JP2 1530 aa28.98■■■□□ 2.23
HS3ST3A1-202ENST00000578576 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.23
HS3ST3A1-202ENST00000578576 ZCCHC6Q5VYS8 1495 aaKnown RBP28.96■■■□□ 2.23
HS3ST3A1-202ENST00000578576 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
HS3ST3A1-202ENST00000578576 DCAF1Q9Y4B6 1507 aa28.74■■■□□ 2.19
HS3ST3A1-202ENST00000578576 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
HS3ST3A1-202ENST00000578576 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
HS3ST3A1-202ENST00000578576 SHROOM4Q9ULL8 1493 aa28.26■■■□□ 2.11
HS3ST3A1-202ENST00000578576 CC2D2AQ9P2K1 1620 aa28.22■■■□□ 2.11
HS3ST3A1-202ENST00000578576 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
HS3ST3A1-202ENST00000578576 EIF4G1Q04637 1599 aaKnown RBP28.01■■■□□ 2.07
HS3ST3A1-202ENST00000578576 DNAJC5Q9H3Z4 198 aa27.88■■■□□ 2.05
HS3ST3A1-202ENST00000578576 CUX2O14529 1486 aa27.24■■□□□ 1.95
HS3ST3A1-202ENST00000578576 SMARCA4P51532 1647 aa27.17■■□□□ 1.94
HS3ST3A1-202ENST00000578576 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
HS3ST3A1-202ENST00000578576 ATAD2BQ9ULI0 1458 aa27.12■■□□□ 1.93
HS3ST3A1-202ENST00000578576 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
HS3ST3A1-202ENST00000578576 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
HS3ST3A1-202ENST00000578576 ERCC6Q03468 1493 aa27■■□□□ 1.91
HS3ST3A1-202ENST00000578576 MROH2BQ7Z745 1585 aa26.97■■□□□ 1.91
HS3ST3A1-202ENST00000578576 HMGXB3Q12766 1538 aa26.9■■□□□ 1.9
HS3ST3A1-202ENST00000578576 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
HS3ST3A1-202ENST00000578576 PEG3Q9GZU2 1588 aa26.82■■□□□ 1.88
HS3ST3A1-202ENST00000578576 NESP48681 1621 aa26.72■■□□□ 1.87
HS3ST3A1-202ENST00000578576 WIZO95785 1651 aa26.68■■□□□ 1.86
HS3ST3A1-202ENST00000578576 THOC2Q8NI27 1593 aaKnown RBP26.61■■□□□ 1.85
HS3ST3A1-202ENST00000578576 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
HS3ST3A1-202ENST00000578576 LAMC3Q9Y6N6 1575 aa26.45■■□□□ 1.82
HS3ST3A1-202ENST00000578576 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
HS3ST3A1-202ENST00000578576 KIF21AQ7Z4S6 1674 aa26.35■■□□□ 1.81
HS3ST3A1-202ENST00000578576 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
HS3ST3A1-202ENST00000578576 PDS5BQ9NTI5 1447 aa26.31■■□□□ 1.8
HS3ST3A1-202ENST00000578576 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
HS3ST3A1-202ENST00000578576 CFTRP13569 1480 aa26.09■■□□□ 1.77
HS3ST3A1-202ENST00000578576 MRC2Q9UBG0 1479 aa26.07■■□□□ 1.76
HS3ST3A1-202ENST00000578576 WDR62O43379 1518 aa26.06■■□□□ 1.76
HS3ST3A1-202ENST00000578576 FANCD2Q9BXW9 1451 aa26.05■■□□□ 1.76
HS3ST3A1-202ENST00000578576 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
HS3ST3A1-202ENST00000578576 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
HS3ST3A1-202ENST00000578576 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
HS3ST3A1-202ENST00000578576 URB2Q14146 1524 aaKnown RBP25.84■■□□□ 1.73
HS3ST3A1-202ENST00000578576 OSCARQ8IYS5 282 aa25.75■■□□□ 1.71
HS3ST3A1-202ENST00000578576 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
HS3ST3A1-202ENST00000578576 RIMBP3CA6NJZ7 1639 aa25.63■■□□□ 1.69
HS3ST3A1-202ENST00000578576 RIMBP3BA6NNM3 1639 aa25.63■■□□□ 1.69
HS3ST3A1-202ENST00000578576 RIMBP3Q9UFD9 1639 aa25.63■■□□□ 1.69
HS3ST3A1-202ENST00000578576 TOPBP1Q92547 1522 aa25.6■■□□□ 1.69
HS3ST3A1-202ENST00000578576 ZNF608Q9ULD9 1512 aaPredicted RBP25.51■■□□□ 1.67
HS3ST3A1-202ENST00000578576 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
HS3ST3A1-202ENST00000578576 ABCC8Q09428 1581 aa25.49■■□□□ 1.67
HS3ST3A1-202ENST00000578576 IFT140Q96RY7 1462 aa25.48■■□□□ 1.67
HS3ST3A1-202ENST00000578576 ARHGEF11O15085 1522 aa25.47■■□□□ 1.67
HS3ST3A1-202ENST00000578576 POLA1P09884 1462 aaPredicted RBP25.35■■□□□ 1.65
HS3ST3A1-202ENST00000578576 TARBP1Q13395 1621 aaKnown RBP25.34■■□□□ 1.65
HS3ST3A1-202ENST00000578576 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.65
HS3ST3A1-202ENST00000578576 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
HS3ST3A1-202ENST00000578576 EIF4G3O43432 1585 aaKnown RBP25.31■■□□□ 1.64
HS3ST3A1-202ENST00000578576 CUX1P39880 1505 aa25.3■■□□□ 1.64
HS3ST3A1-202ENST00000578576 SOGA1O94964 1423 aa25.29■■□□□ 1.64
HS3ST3A1-202ENST00000578576 FGD5Q6ZNL6 1462 aa25.26■■□□□ 1.63
HS3ST3A1-202ENST00000578576 TDRD9Q8NDG6 1382 aaKnown RBP25.23■■□□□ 1.63
HS3ST3A1-202ENST00000578576 ARAP1Q96P48 1450 aa25.18■■□□□ 1.62
HS3ST3A1-202ENST00000578576 CYB5RLQ6IPT4 315 aa25.18■■□□□ 1.62
HS3ST3A1-202ENST00000578576 CHD1O14646 1710 aa25.16■■□□□ 1.62
HS3ST3A1-202ENST00000578576 FBLN2P98095 1184 aa25.16■■□□□ 1.62
HS3ST3A1-202ENST00000578576 TRHP20396 242 aaPredicted RBP25.08■■□□□ 1.61
HS3ST3A1-202ENST00000578576 SNAPC4Q5SXM2 1469 aa25.03■■□□□ 1.6
HS3ST3A1-202ENST00000578576 WDR97A6NE52 1622 aa25.02■■□□□ 1.6
HS3ST3A1-202ENST00000578576 GRIN2BQ13224 1484 aa24.97■■□□□ 1.59
HS3ST3A1-202ENST00000578576 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
HS3ST3A1-202ENST00000578576 CHMP7Q8WUX9 453 aaPredicted RBP24.96■■□□□ 1.59
HS3ST3A1-202ENST00000578576 SYNJ1O43426 1573 aa24.96■■□□□ 1.59
HS3ST3A1-202ENST00000578576 GAPVD1Q14C86 1478 aa24.96■■□□□ 1.59
HS3ST3A1-202ENST00000578576 ABCA10Q8WWZ4 1543 aa24.94■■□□□ 1.58
HS3ST3A1-202ENST00000578576 PBRM1Q86U86 1689 aa24.93■■□□□ 1.58
HS3ST3A1-202ENST00000578576 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
HS3ST3A1-202ENST00000578576 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
HS3ST3A1-202ENST00000578576 MAGI1Q96QZ7 1491 aaPredicted RBP24.9■■□□□ 1.58
HS3ST3A1-202ENST00000578576 ABCA5Q8WWZ7 1642 aa24.88■■□□□ 1.57
HS3ST3A1-202ENST00000578576 CLASP1Q7Z460 1538 aa24.87■■□□□ 1.57
HS3ST3A1-202ENST00000578576 SYNJ2O15056 1496 aa24.84■■□□□ 1.57
HS3ST3A1-202ENST00000578576 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
HS3ST3A1-202ENST00000578576 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
HS3ST3A1-202ENST00000578576 GRIN2AQ12879 1464 aa24.65■■□□□ 1.54
HS3ST3A1-202ENST00000578576 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
HS3ST3A1-202ENST00000578576 ERICH3Q5RHP9 1530 aa24.61■■□□□ 1.53
HS3ST3A1-202ENST00000578576 CEP170Q5SW79 1584 aa24.59■■□□□ 1.53
HS3ST3A1-202ENST00000578576 NUP160Q12769 1436 aa24.54■■□□□ 1.52
HS3ST3A1-202ENST00000578576 ERCC6L2Q5T890 1561 aa24.52■■□□□ 1.52
HS3ST3A1-202ENST00000578576 IGF1RP08069 1367 aa24.46■■□□□ 1.51
HS3ST3A1-202ENST00000578576 KIF27Q86VH2 1401 aa24.45■■□□□ 1.51
HS3ST3A1-202ENST00000578576 SHROOM2Q13796 1616 aa24.39■■□□□ 1.5
HS3ST3A1-202ENST00000578576 JPH4Q96JJ6 628 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms