RNA–Protein interactions for RNA: ENST00000346301.8

TTC8-203, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 1 (best) BASIC

Gene TTC8, Length 2,058 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-203ENST00000346301 NISCHQ9Y2I1 1504 aa32.07■■■□□ 2.72
TTC8-203ENST00000346301 CCDC180Q9P1Z9 1646 aa27.65■■■□□ 2.02
TTC8-203ENST00000346301 ZCCHC6Q5VYS8 1495 aaKnown RBP27.04■■□□□ 1.92
TTC8-203ENST00000346301 SHROOM4Q9ULL8 1493 aa26.64■■□□□ 1.86
TTC8-203ENST00000346301 DCAF1Q9Y4B6 1507 aa26.46■■□□□ 1.83
TTC8-203ENST00000346301 DCAF8L2P0C7V8 631 aa26.42■■□□□ 1.82
TTC8-203ENST00000346301 MYO15BQ96JP2 1530 aa25.93■■□□□ 1.74
TTC8-203ENST00000346301 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
TTC8-203ENST00000346301 ABCC9O60706 1549 aa25.8■■□□□ 1.72
TTC8-203ENST00000346301 NACADO15069 1562 aa25.65■■□□□ 1.7
TTC8-203ENST00000346301 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
TTC8-203ENST00000346301 RB1CC1Q8TDY2 1594 aa25.31■■□□□ 1.64
TTC8-203ENST00000346301 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
TTC8-203ENST00000346301 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
TTC8-203ENST00000346301 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
TTC8-203ENST00000346301 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
TTC8-203ENST00000346301 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
TTC8-203ENST00000346301 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
TTC8-203ENST00000346301 WIZO95785 1651 aa24.68■■□□□ 1.54
TTC8-203ENST00000346301 BICRAQ9NZM4 1560 aa24.62■■□□□ 1.53
TTC8-203ENST00000346301 SMARCA4P51532 1647 aa24.54■■□□□ 1.52
TTC8-203ENST00000346301 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.51
TTC8-203ENST00000346301 TOP2AP11388 1531 aaKnown RBP24.37■■□□□ 1.49
TTC8-203ENST00000346301 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
TTC8-203ENST00000346301 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.47
TTC8-203ENST00000346301 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
TTC8-203ENST00000346301 SMARCA2P51531 1590 aa24.19■■□□□ 1.46
TTC8-203ENST00000346301 CCDC88BA6NC98 1476 aa24.18■■□□□ 1.46
TTC8-203ENST00000346301 LOC105371045A0A1W2PR82 267 aa24.15■■□□□ 1.46
TTC8-203ENST00000346301 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
TTC8-203ENST00000346301 BAZ1BQ9UIG0 1483 aaKnown RBP23.9■■□□□ 1.42
TTC8-203ENST00000346301 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
TTC8-203ENST00000346301 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
TTC8-203ENST00000346301 NCAPD3P42695 1498 aa23.7■■□□□ 1.39
TTC8-203ENST00000346301 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
TTC8-203ENST00000346301 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
TTC8-203ENST00000346301 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
TTC8-203ENST00000346301 PCGF6Q9BYE7 350 aa23.58■■□□□ 1.36
TTC8-203ENST00000346301 SOGA1O94964 1423 aa23.54■■□□□ 1.36
TTC8-203ENST00000346301 SYNJ1O43426 1573 aa23.51■■□□□ 1.35
TTC8-203ENST00000346301 EEA1Q15075 1411 aa23.48■■□□□ 1.35
TTC8-203ENST00000346301 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
TTC8-203ENST00000346301 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
TTC8-203ENST00000346301 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
TTC8-203ENST00000346301 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
TTC8-203ENST00000346301 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
TTC8-203ENST00000346301 CFTRP13569 1480 aa23.34■■□□□ 1.33
TTC8-203ENST00000346301 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
TTC8-203ENST00000346301 HRCP23327 699 aa23.29■■□□□ 1.32
TTC8-203ENST00000346301 TNIKQ9UKE5 1360 aa23.26■■□□□ 1.31
TTC8-203ENST00000346301 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
TTC8-203ENST00000346301 GOLGA3Q08378 1498 aa23.22■■□□□ 1.31
TTC8-203ENST00000346301 CEP162Q5TB80 1403 aa23.2■■□□□ 1.3
TTC8-203ENST00000346301 KIF21BO75037 1637 aa23.18■■□□□ 1.3
TTC8-203ENST00000346301 CUX1P39880 1505 aa23.18■■□□□ 1.3
TTC8-203ENST00000346301 CEP164Q9UPV0 1460 aa23.16■■□□□ 1.3
TTC8-203ENST00000346301 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
TTC8-203ENST00000346301 UBTFP17480 764 aaKnown RBP23.14■■□□□ 1.29
TTC8-203ENST00000346301 RAPGEF2Q9Y4G8 1499 aa23.01■■□□□ 1.27
TTC8-203ENST00000346301 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
TTC8-203ENST00000346301 PRXQ9BXM0 1461 aa22.94■■□□□ 1.26
TTC8-203ENST00000346301 KIF27Q86VH2 1401 aa22.94■■□□□ 1.26
TTC8-203ENST00000346301 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
TTC8-203ENST00000346301 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
TTC8-203ENST00000346301 CLIP1P30622 1438 aa22.89■■□□□ 1.25
TTC8-203ENST00000346301 NESP48681 1621 aa22.85■■□□□ 1.25
TTC8-203ENST00000346301 FGD5Q6ZNL6 1462 aa22.83■■□□□ 1.25
TTC8-203ENST00000346301 LAMC3Q9Y6N6 1575 aa22.79■■□□□ 1.24
TTC8-203ENST00000346301 CUX2O14529 1486 aa22.79■■□□□ 1.24
TTC8-203ENST00000346301 DNMBPQ6XZF7 1577 aa22.76■■□□□ 1.23
TTC8-203ENST00000346301 VPS8Q8N3P4 1428 aa22.76■■□□□ 1.23
TTC8-203ENST00000346301 DNAJC5BQ9UF47 199 aa22.73■■□□□ 1.23
TTC8-203ENST00000346301 IGF1RP08069 1367 aa22.73■■□□□ 1.23
TTC8-203ENST00000346301 TOPBP1Q92547 1522 aa22.71■■□□□ 1.23
TTC8-203ENST00000346301 TTBK1Q5TCY1 1321 aaPredicted RBP22.69■■□□□ 1.22
TTC8-203ENST00000346301 RANGAP1P46060 587 aaPredicted RBP22.68■■□□□ 1.22
TTC8-203ENST00000346301 ZEB1P37275 1124 aaPredicted RBP22.66■■□□□ 1.22
TTC8-203ENST00000346301 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
TTC8-203ENST00000346301 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
TTC8-203ENST00000346301 RAD54L2Q9Y4B4 1467 aa22.62■■□□□ 1.21
TTC8-203ENST00000346301 ARAP1Q96P48 1450 aa22.62■■□□□ 1.21
TTC8-203ENST00000346301 CARMIL1Q5VZK9 1371 aa22.61■■□□□ 1.21
TTC8-203ENST00000346301 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
TTC8-203ENST00000346301 URB2Q14146 1524 aaKnown RBP22.6■■□□□ 1.21
TTC8-203ENST00000346301 KIF21AQ7Z4S6 1674 aa22.54■■□□□ 1.2
TTC8-203ENST00000346301 ARHGAP35Q9NRY4 1499 aa22.52■■□□□ 1.2
TTC8-203ENST00000346301 APLP2Q06481 763 aa22.52■■□□□ 1.2
TTC8-203ENST00000346301 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
TTC8-203ENST00000346301 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.45■■□□□ 1.18
TTC8-203ENST00000346301 CUL7Q14999 1698 aa22.44■■□□□ 1.18
TTC8-203ENST00000346301 ABCA5Q8WWZ7 1642 aa22.4■■□□□ 1.18
TTC8-203ENST00000346301 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
TTC8-203ENST00000346301 TDRD9Q8NDG6 1382 aaKnown RBP22.36■■□□□ 1.17
TTC8-203ENST00000346301 TARBP1Q13395 1621 aaKnown RBP22.34■■□□□ 1.17
TTC8-203ENST00000346301 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.17
TTC8-203ENST00000346301 KANK4Q5T7N3 995 aaPredicted RBP22.33■■□□□ 1.17
TTC8-203ENST00000346301 CTTNBP2Q8WZ74 1663 aa22.3■■□□□ 1.16
TTC8-203ENST00000346301 MRC2Q9UBG0 1479 aa22.29■■□□□ 1.16
TTC8-203ENST00000346301 HNRNPUL2Q1KMD3 747 aaKnown RBP22.25■■□□□ 1.15
TTC8-203ENST00000346301 MAP3K1Q13233 1512 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms