RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
RPAIN-201ENST00000327154 ABCC9O60706 1549 aa31.24■■■□□ 2.59
RPAIN-201ENST00000327154 CCDC180Q9P1Z9 1646 aa31.22■■■□□ 2.59
RPAIN-201ENST00000327154 RB1CC1Q8TDY2 1594 aa29.72■■■□□ 2.35
RPAIN-201ENST00000327154 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
RPAIN-201ENST00000327154 NACADO15069 1562 aa29.56■■■□□ 2.32
RPAIN-201ENST00000327154 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.27
RPAIN-201ENST00000327154 PABPN1Q86U42 306 aaKnown RBP eCLIP29.2■■■□□ 2.26
RPAIN-201ENST00000327154 MYO15BQ96JP2 1530 aa29.19■■■□□ 2.26
RPAIN-201ENST00000327154 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.23
RPAIN-201ENST00000327154 UNC13AQ9UPW8 1703 aa28.95■■■□□ 2.23
RPAIN-201ENST00000327154 DCAF1Q9Y4B6 1507 aa28.88■■■□□ 2.21
RPAIN-201ENST00000327154 BICRAQ9NZM4 1560 aa28.85■■■□□ 2.21
RPAIN-201ENST00000327154 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
RPAIN-201ENST00000327154 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
RPAIN-201ENST00000327154 CC2D2AQ9P2K1 1620 aa28.16■■■□□ 2.1
RPAIN-201ENST00000327154 EIF4G1Q04637 1599 aaKnown RBP28.13■■■□□ 2.09
RPAIN-201ENST00000327154 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
RPAIN-201ENST00000327154 NCAPD3P42695 1498 aa27.35■■□□□ 1.97
RPAIN-201ENST00000327154 ATAD2BQ9ULI0 1458 aa27.28■■□□□ 1.96
RPAIN-201ENST00000327154 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
RPAIN-201ENST00000327154 SMARCA2P51531 1590 aa27.16■■□□□ 1.94
RPAIN-201ENST00000327154 BAZ1AQ9NRL2 1556 aaPredicted RBP27.14■■□□□ 1.93
RPAIN-201ENST00000327154 HMGXB3Q12766 1538 aa27.07■■□□□ 1.92
RPAIN-201ENST00000327154 BAZ1BQ9UIG0 1483 aaKnown RBP27.01■■□□□ 1.91
RPAIN-201ENST00000327154 MROH2BQ7Z745 1585 aa26.99■■□□□ 1.91
RPAIN-201ENST00000327154 ERCC6Q03468 1493 aa26.94■■□□□ 1.9
RPAIN-201ENST00000327154 PEG3Q9GZU2 1588 aa26.94■■□□□ 1.9
RPAIN-201ENST00000327154 NESP48681 1621 aa26.87■■□□□ 1.89
RPAIN-201ENST00000327154 CUX2O14529 1486 aa26.81■■□□□ 1.88
RPAIN-201ENST00000327154 DNAJC5Q9H3Z4 198 aa26.74■■□□□ 1.87
RPAIN-201ENST00000327154 WIZO95785 1651 aa26.63■■□□□ 1.85
RPAIN-201ENST00000327154 LAMC3Q9Y6N6 1575 aa26.63■■□□□ 1.85
RPAIN-201ENST00000327154 CADPSQ9ULU8 1353 aa26.56■■□□□ 1.84
RPAIN-201ENST00000327154 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
RPAIN-201ENST00000327154 RSF1Q96T23 1441 aaPredicted RBP26.52■■□□□ 1.84
RPAIN-201ENST00000327154 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
RPAIN-201ENST00000327154 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
RPAIN-201ENST00000327154 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
RPAIN-201ENST00000327154 MRC2Q9UBG0 1479 aa26.28■■□□□ 1.8
RPAIN-201ENST00000327154 CFTRP13569 1480 aa26.24■■□□□ 1.79
RPAIN-201ENST00000327154 FANCD2Q9BXW9 1451 aa26.22■■□□□ 1.79
RPAIN-201ENST00000327154 CEP164Q9UPV0 1460 aa26.21■■□□□ 1.79
RPAIN-201ENST00000327154 WDR62O43379 1518 aa26.18■■□□□ 1.78
RPAIN-201ENST00000327154 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.77
RPAIN-201ENST00000327154 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
RPAIN-201ENST00000327154 PRDM2Q13029 1718 aa25.81■■□□□ 1.72
RPAIN-201ENST00000327154 OSCARQ8IYS5 282 aa25.74■■□□□ 1.71
RPAIN-201ENST00000327154 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
RPAIN-201ENST00000327154 IFT140Q96RY7 1462 aa25.69■■□□□ 1.7
RPAIN-201ENST00000327154 ABCC8Q09428 1581 aa25.67■■□□□ 1.7
RPAIN-201ENST00000327154 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
RPAIN-201ENST00000327154 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
RPAIN-201ENST00000327154 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
RPAIN-201ENST00000327154 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
RPAIN-201ENST00000327154 AQRO60306 1485 aaKnown RBP eCLIP25.48■■□□□ 1.673e-7■■■□□ 18.2
RPAIN-201ENST00000327154 POLA1P09884 1462 aaPredicted RBP25.47■■□□□ 1.67
RPAIN-201ENST00000327154 TARBP1Q13395 1621 aaKnown RBP25.44■■□□□ 1.66
RPAIN-201ENST00000327154 EIF4G3O43432 1585 aaKnown RBP25.44■■□□□ 1.66
RPAIN-201ENST00000327154 SOGA1O94964 1423 aa25.43■■□□□ 1.66
RPAIN-201ENST00000327154 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
RPAIN-201ENST00000327154 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
RPAIN-201ENST00000327154 FBLN2P98095 1184 aa25.36■■□□□ 1.65
RPAIN-201ENST00000327154 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
RPAIN-201ENST00000327154 CUX1P39880 1505 aa25.33■■□□□ 1.65
RPAIN-201ENST00000327154 RIMBP3CA6NJZ7 1639 aa25.23■■□□□ 1.63
RPAIN-201ENST00000327154 RIMBP3BA6NNM3 1639 aa25.23■■□□□ 1.63
RPAIN-201ENST00000327154 RIMBP3Q9UFD9 1639 aa25.23■■□□□ 1.63
RPAIN-201ENST00000327154 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
RPAIN-201ENST00000327154 CHD1O14646 1710 aa25.19■■□□□ 1.62
RPAIN-201ENST00000327154 SNAPC4Q5SXM2 1469 aa25.17■■□□□ 1.62
RPAIN-201ENST00000327154 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
RPAIN-201ENST00000327154 CYB5RLQ6IPT4 315 aa25.15■■□□□ 1.62
RPAIN-201ENST00000327154 WDR97A6NE52 1622 aa25.14■■□□□ 1.61
RPAIN-201ENST00000327154 GRIN2BQ13224 1484 aa25.14■■□□□ 1.61
RPAIN-201ENST00000327154 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
RPAIN-201ENST00000327154 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.6
RPAIN-201ENST00000327154 ABCA10Q8WWZ4 1543 aa25.05■■□□□ 1.6
RPAIN-201ENST00000327154 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
RPAIN-201ENST00000327154 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
RPAIN-201ENST00000327154 ARAP1Q96P48 1450 aa24.98■■□□□ 1.59
RPAIN-201ENST00000327154 SYNJ1O43426 1573 aa24.96■■□□□ 1.59
RPAIN-201ENST00000327154 CLASP1Q7Z460 1538 aa24.95■■□□□ 1.58
RPAIN-201ENST00000327154 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
RPAIN-201ENST00000327154 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
RPAIN-201ENST00000327154 PBRM1Q86U86 1689 aa24.93■■□□□ 1.58
RPAIN-201ENST00000327154 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
RPAIN-201ENST00000327154 TRHP20396 242 aaPredicted RBP24.82■■□□□ 1.56
RPAIN-201ENST00000327154 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
RPAIN-201ENST00000327154 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
RPAIN-201ENST00000327154 ADAMTS12P58397 1594 aa24.75■■□□□ 1.55
RPAIN-201ENST00000327154 ERICH3Q5RHP9 1530 aa24.72■■□□□ 1.55
RPAIN-201ENST00000327154 NUP160Q12769 1436 aa24.71■■□□□ 1.55
RPAIN-201ENST00000327154 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
RPAIN-201ENST00000327154 ERCC6L2Q5T890 1561 aa24.62■■□□□ 1.53
RPAIN-201ENST00000327154 JPH4Q96JJ6 628 aa24.57■■□□□ 1.52
RPAIN-201ENST00000327154 IGF1RP08069 1367 aa24.55■■□□□ 1.52
RPAIN-201ENST00000327154 KIF27Q86VH2 1401 aa24.52■■□□□ 1.52
RPAIN-201ENST00000327154 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
RPAIN-201ENST00000327154 PRG4Q92954 1404 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms