RNA–Protein interactions for RNA: ENST00000390619.2

IGHV4-39-201, Transcript of immunoglobulin heavy variable 4-39, humanhuman

APPRIS P1 BASIC

Gene IGHV4-39, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-39-201ENST00000390619 NISCHQ9Y2I1 1504 aa33.91■■■■□ 3.02
IGHV4-39-201ENST00000390619 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
IGHV4-39-201ENST00000390619 ABCC9O60706 1549 aa28.73■■■□□ 2.19
IGHV4-39-201ENST00000390619 ZCCHC6Q5VYS8 1495 aaKnown RBP28.4■■■□□ 2.14
IGHV4-39-201ENST00000390619 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
IGHV4-39-201ENST00000390619 NACADO15069 1562 aa28.04■■■□□ 2.08
IGHV4-39-201ENST00000390619 MYO15BQ96JP2 1530 aa28.04■■■□□ 2.08
IGHV4-39-201ENST00000390619 RB1CC1Q8TDY2 1594 aa27.96■■■□□ 2.07
IGHV4-39-201ENST00000390619 DCAF8L2P0C7V8 631 aa27.88■■■□□ 2.05
IGHV4-39-201ENST00000390619 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
IGHV4-39-201ENST00000390619 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
IGHV4-39-201ENST00000390619 BICRAQ9NZM4 1560 aa27.11■■□□□ 1.93
IGHV4-39-201ENST00000390619 SHROOM4Q9ULL8 1493 aa26.99■■□□□ 1.91
IGHV4-39-201ENST00000390619 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
IGHV4-39-201ENST00000390619 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.81
IGHV4-39-201ENST00000390619 CECR2Q9BXF3 1484 aa26.31■■□□□ 1.8
IGHV4-39-201ENST00000390619 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
IGHV4-39-201ENST00000390619 BAZ1AQ9NRL2 1556 aaPredicted RBP26.28■■□□□ 1.8
IGHV4-39-201ENST00000390619 MROH2BQ7Z745 1585 aa26.14■■□□□ 1.78
IGHV4-39-201ENST00000390619 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
IGHV4-39-201ENST00000390619 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
IGHV4-39-201ENST00000390619 RSF1Q96T23 1441 aaPredicted RBP25.97■■□□□ 1.75
IGHV4-39-201ENST00000390619 SMARCA2P51531 1590 aa25.96■■□□□ 1.75
IGHV4-39-201ENST00000390619 WIZO95785 1651 aa25.96■■□□□ 1.75
IGHV4-39-201ENST00000390619 ATAD2BQ9ULI0 1458 aa25.9■■□□□ 1.74
IGHV4-39-201ENST00000390619 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
IGHV4-39-201ENST00000390619 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
IGHV4-39-201ENST00000390619 DNAJC5BQ9UF47 199 aa25.76■■□□□ 1.71
IGHV4-39-201ENST00000390619 BAZ1BQ9UIG0 1483 aaKnown RBP25.73■■□□□ 1.71
IGHV4-39-201ENST00000390619 TOP2AP11388 1531 aaKnown RBP25.7■■□□□ 1.7
IGHV4-39-201ENST00000390619 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
IGHV4-39-201ENST00000390619 CCDC88BA6NC98 1476 aa25.3■■□□□ 1.64
IGHV4-39-201ENST00000390619 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
IGHV4-39-201ENST00000390619 LAMC3Q9Y6N6 1575 aa25.13■■□□□ 1.61
IGHV4-39-201ENST00000390619 CFTRP13569 1480 aa25.04■■□□□ 1.6
IGHV4-39-201ENST00000390619 NESP48681 1621 aa25.03■■□□□ 1.6
IGHV4-39-201ENST00000390619 CADPSQ9ULU8 1353 aa25.03■■□□□ 1.6
IGHV4-39-201ENST00000390619 KIF21AQ7Z4S6 1674 aa24.93■■□□□ 1.58
IGHV4-39-201ENST00000390619 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
IGHV4-39-201ENST00000390619 FANCD2Q9BXW9 1451 aa24.8■■□□□ 1.56
IGHV4-39-201ENST00000390619 CEP164Q9UPV0 1460 aa24.75■■□□□ 1.55
IGHV4-39-201ENST00000390619 ERCC6Q03468 1493 aa24.72■■□□□ 1.55
IGHV4-39-201ENST00000390619 THOC2Q8NI27 1593 aaKnown RBP24.68■■□□□ 1.54
IGHV4-39-201ENST00000390619 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
IGHV4-39-201ENST00000390619 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
IGHV4-39-201ENST00000390619 DNMBPQ6XZF7 1577 aa24.56■■□□□ 1.52
IGHV4-39-201ENST00000390619 WDR62O43379 1518 aa24.56■■□□□ 1.52
IGHV4-39-201ENST00000390619 URB2Q14146 1524 aaKnown RBP24.55■■□□□ 1.52
IGHV4-39-201ENST00000390619 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
IGHV4-39-201ENST00000390619 CUX1P39880 1505 aa24.51■■□□□ 1.51
IGHV4-39-201ENST00000390619 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
IGHV4-39-201ENST00000390619 WRNQ14191 1432 aaPredicted RBP eCLIP24.49■■□□□ 1.51
IGHV4-39-201ENST00000390619 TOPBP1Q92547 1522 aa24.49■■□□□ 1.51
IGHV4-39-201ENST00000390619 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
IGHV4-39-201ENST00000390619 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
IGHV4-39-201ENST00000390619 CUX2O14529 1486 aa24.32■■□□□ 1.48
IGHV4-39-201ENST00000390619 POLA1P09884 1462 aaPredicted RBP24.31■■□□□ 1.48
IGHV4-39-201ENST00000390619 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
IGHV4-39-201ENST00000390619 TARBP1Q13395 1621 aaKnown RBP24.24■■□□□ 1.47
IGHV4-39-201ENST00000390619 CHIC1Q5VXU3 224 aa24.21■■□□□ 1.47
IGHV4-39-201ENST00000390619 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
IGHV4-39-201ENST00000390619 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
IGHV4-39-201ENST00000390619 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
IGHV4-39-201ENST00000390619 SOGA1O94964 1423 aa24.13■■□□□ 1.45
IGHV4-39-201ENST00000390619 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
IGHV4-39-201ENST00000390619 ABCA5Q8WWZ7 1642 aa24.08■■□□□ 1.45
IGHV4-39-201ENST00000390619 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.44
IGHV4-39-201ENST00000390619 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
IGHV4-39-201ENST00000390619 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
IGHV4-39-201ENST00000390619 KIF27Q86VH2 1401 aa23.93■■□□□ 1.42
IGHV4-39-201ENST00000390619 GAPVD1Q14C86 1478 aa23.92■■□□□ 1.42
IGHV4-39-201ENST00000390619 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
IGHV4-39-201ENST00000390619 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.42
IGHV4-39-201ENST00000390619 ERICH3Q5RHP9 1530 aa23.87■■□□□ 1.41
IGHV4-39-201ENST00000390619 RUSC2Q8N2Y8 1516 aa23.87■■□□□ 1.41
IGHV4-39-201ENST00000390619 GRIN2BQ13224 1484 aa23.85■■□□□ 1.41
IGHV4-39-201ENST00000390619 CUL7Q14999 1698 aa23.84■■□□□ 1.41
IGHV4-39-201ENST00000390619 EEA1Q15075 1411 aa23.84■■□□□ 1.41
IGHV4-39-201ENST00000390619 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
IGHV4-39-201ENST00000390619 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
IGHV4-39-201ENST00000390619 MAGI1Q96QZ7 1491 aaPredicted RBP23.77■■□□□ 1.4
IGHV4-39-201ENST00000390619 CHD1O14646 1710 aa23.74■■□□□ 1.39
IGHV4-39-201ENST00000390619 IGF1RP08069 1367 aa23.7■■□□□ 1.38
IGHV4-39-201ENST00000390619 KIF21BO75037 1637 aa23.66■■□□□ 1.38
IGHV4-39-201ENST00000390619 SYNJ2O15056 1496 aa23.65■■□□□ 1.38
IGHV4-39-201ENST00000390619 FHAD1B1AJZ9 1412 aa23.65■■□□□ 1.38
IGHV4-39-201ENST00000390619 FAM9AQ8IZU1 332 aaPredicted RBP23.62■■□□□ 1.37
IGHV4-39-201ENST00000390619 PRXQ9BXM0 1461 aa23.62■■□□□ 1.37
IGHV4-39-201ENST00000390619 CSRNP3Q8WYN3 585 aa23.6■■□□□ 1.37
IGHV4-39-201ENST00000390619 CARMIL1Q5VZK9 1371 aa23.59■■□□□ 1.37
IGHV4-39-201ENST00000390619 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
IGHV4-39-201ENST00000390619 RAPGEF2Q9Y4G8 1499 aa23.56■■□□□ 1.36
IGHV4-39-201ENST00000390619 CTTNBP2Q8WZ74 1663 aa23.55■■□□□ 1.36
IGHV4-39-201ENST00000390619 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
IGHV4-39-201ENST00000390619 GOLGA3Q08378 1498 aa23.48■■□□□ 1.35
IGHV4-39-201ENST00000390619 CHMP7Q8WUX9 453 aaPredicted RBP23.46■■□□□ 1.35
IGHV4-39-201ENST00000390619 NUP160Q12769 1436 aa23.43■■□□□ 1.34
IGHV4-39-201ENST00000390619 FBLN2P98095 1184 aa23.42■■□□□ 1.34
IGHV4-39-201ENST00000390619 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
IGHV4-39-201ENST00000390619 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms