RNA–Protein interactions for RNA: ENST00000438387.6

CSHL1-205, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 5 BASIC

Gene CSHL1, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-205ENST00000438387 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
CSHL1-205ENST00000438387 CCDC180Q9P1Z9 1646 aa31.23■■■□□ 2.59
CSHL1-205ENST00000438387 ABCC9O60706 1549 aa30.67■■■□□ 2.5
CSHL1-205ENST00000438387 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
CSHL1-205ENST00000438387 NACADO15069 1562 aa29.39■■■□□ 2.29
CSHL1-205ENST00000438387 MYO15BQ96JP2 1530 aa29.16■■■□□ 2.26
CSHL1-205ENST00000438387 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
CSHL1-205ENST00000438387 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
CSHL1-205ENST00000438387 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
CSHL1-205ENST00000438387 UNC13AQ9UPW8 1703 aa28.81■■■□□ 2.2
CSHL1-205ENST00000438387 BICRAQ9NZM4 1560 aa28.57■■■□□ 2.16
CSHL1-205ENST00000438387 PABPN1Q86U42 306 aaKnown RBP eCLIP28.55■■■□□ 2.16
CSHL1-205ENST00000438387 SCRIBQ14160 1630 aa28.38■■■□□ 2.13
CSHL1-205ENST00000438387 SHROOM4Q9ULL8 1493 aa28.34■■■□□ 2.13
CSHL1-205ENST00000438387 DNAJC5BQ9UF47 199 aa28.32■■■□□ 2.12
CSHL1-205ENST00000438387 EIF4G1Q04637 1599 aaKnown RBP27.84■■■□□ 2.05
CSHL1-205ENST00000438387 CC2D2AQ9P2K1 1620 aa27.78■■■□□ 2.04
CSHL1-205ENST00000438387 CECR2Q9BXF3 1484 aa27.62■■■□□ 2.01
CSHL1-205ENST00000438387 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
CSHL1-205ENST00000438387 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
CSHL1-205ENST00000438387 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
CSHL1-205ENST00000438387 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
CSHL1-205ENST00000438387 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
CSHL1-205ENST00000438387 HMGXB3Q12766 1538 aa26.97■■□□□ 1.91
CSHL1-205ENST00000438387 PEG3Q9GZU2 1588 aa26.93■■□□□ 1.9
CSHL1-205ENST00000438387 MROH2BQ7Z745 1585 aa26.87■■□□□ 1.89
CSHL1-205ENST00000438387 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
CSHL1-205ENST00000438387 WIZO95785 1651 aa26.57■■□□□ 1.84
CSHL1-205ENST00000438387 ERCC6Q03468 1493 aa26.48■■□□□ 1.83
CSHL1-205ENST00000438387 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
CSHL1-205ENST00000438387 NESP48681 1621 aa26.46■■□□□ 1.83
CSHL1-205ENST00000438387 LAMC3Q9Y6N6 1575 aa26.44■■□□□ 1.82
CSHL1-205ENST00000438387 CUX2O14529 1486 aa26.35■■□□□ 1.81
CSHL1-205ENST00000438387 TOP2AP11388 1531 aaKnown RBP26.32■■□□□ 1.8
CSHL1-205ENST00000438387 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
CSHL1-205ENST00000438387 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
CSHL1-205ENST00000438387 THOC2Q8NI27 1593 aaKnown RBP26.2■■□□□ 1.79
CSHL1-205ENST00000438387 KIF21AQ7Z4S6 1674 aa26.2■■□□□ 1.78
CSHL1-205ENST00000438387 CFTRP13569 1480 aa26.07■■□□□ 1.76
CSHL1-205ENST00000438387 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
CSHL1-205ENST00000438387 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
CSHL1-205ENST00000438387 FANCD2Q9BXW9 1451 aa25.97■■□□□ 1.75
CSHL1-205ENST00000438387 CCDC88BA6NC98 1476 aa25.96■■□□□ 1.75
CSHL1-205ENST00000438387 WDR62O43379 1518 aa25.94■■□□□ 1.74
CSHL1-205ENST00000438387 PRDM2Q13029 1718 aa25.94■■□□□ 1.74
CSHL1-205ENST00000438387 DNAJC5Q9H3Z4 198 aa25.75■■□□□ 1.71
CSHL1-205ENST00000438387 URB2Q14146 1524 aaKnown RBP25.72■■□□□ 1.71
CSHL1-205ENST00000438387 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
CSHL1-205ENST00000438387 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
CSHL1-205ENST00000438387 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
CSHL1-205ENST00000438387 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
CSHL1-205ENST00000438387 IFT140Q96RY7 1462 aa25.45■■□□□ 1.66
CSHL1-205ENST00000438387 ZNF608Q9ULD9 1512 aaPredicted RBP25.31■■□□□ 1.64
CSHL1-205ENST00000438387 POLA1P09884 1462 aaPredicted RBP25.29■■□□□ 1.64
CSHL1-205ENST00000438387 TARBP1Q13395 1621 aaKnown RBP25.29■■□□□ 1.64
CSHL1-205ENST00000438387 EIF4G3O43432 1585 aaKnown RBP25.26■■□□□ 1.63
CSHL1-205ENST00000438387 CUX1P39880 1505 aa25.23■■□□□ 1.63
CSHL1-205ENST00000438387 FGD5Q6ZNL6 1462 aa25.19■■□□□ 1.62
CSHL1-205ENST00000438387 SOGA1O94964 1423 aa25.15■■□□□ 1.62
CSHL1-205ENST00000438387 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
CSHL1-205ENST00000438387 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
CSHL1-205ENST00000438387 OSCARQ8IYS5 282 aa25.12■■□□□ 1.61
CSHL1-205ENST00000438387 AQRO60306 1485 aaKnown RBP eCLIP25.11■■□□□ 1.61
CSHL1-205ENST00000438387 TDRD9Q8NDG6 1382 aaKnown RBP25.01■■□□□ 1.59
CSHL1-205ENST00000438387 BIVM-ERCC5R4GMW8 1640 aa25■■□□□ 1.59
CSHL1-205ENST00000438387 CHD1O14646 1710 aa24.98■■□□□ 1.59
CSHL1-205ENST00000438387 TOP2BQ02880 1626 aa24.98■■□□□ 1.59
CSHL1-205ENST00000438387 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
CSHL1-205ENST00000438387 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
CSHL1-205ENST00000438387 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
CSHL1-205ENST00000438387 GRIN2BQ13224 1484 aa24.93■■□□□ 1.58
CSHL1-205ENST00000438387 SNAPC4Q5SXM2 1469 aa24.91■■□□□ 1.58
CSHL1-205ENST00000438387 MAGI1Q96QZ7 1491 aaPredicted RBP24.91■■□□□ 1.58
CSHL1-205ENST00000438387 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
CSHL1-205ENST00000438387 PBRM1Q86U86 1689 aa24.9■■□□□ 1.58
CSHL1-205ENST00000438387 GAPVD1Q14C86 1478 aa24.88■■□□□ 1.57
CSHL1-205ENST00000438387 FBLN2P98095 1184 aa24.81■■□□□ 1.56
CSHL1-205ENST00000438387 RIMBP3CA6NJZ7 1639 aa24.81■■□□□ 1.56
CSHL1-205ENST00000438387 RIMBP3BA6NNM3 1639 aa24.81■■□□□ 1.56
CSHL1-205ENST00000438387 RIMBP3Q9UFD9 1639 aa24.81■■□□□ 1.56
CSHL1-205ENST00000438387 SYNJ2O15056 1496 aa24.8■■□□□ 1.56
CSHL1-205ENST00000438387 ARHGEF11O15085 1522 aa24.77■■□□□ 1.56
CSHL1-205ENST00000438387 CHMP7Q8WUX9 453 aaPredicted RBP24.74■■□□□ 1.55
CSHL1-205ENST00000438387 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
CSHL1-205ENST00000438387 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
CSHL1-205ENST00000438387 ADAMTS12P58397 1594 aa24.68■■□□□ 1.54
CSHL1-205ENST00000438387 ERICH3Q5RHP9 1530 aa24.67■■□□□ 1.54
CSHL1-205ENST00000438387 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
CSHL1-205ENST00000438387 FHAD1B1AJZ9 1412 aa24.6■■□□□ 1.53
CSHL1-205ENST00000438387 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
CSHL1-205ENST00000438387 NUP160Q12769 1436 aa24.52■■□□□ 1.52
CSHL1-205ENST00000438387 CEP170Q5SW79 1584 aa24.5■■□□□ 1.51
CSHL1-205ENST00000438387 KIF27Q86VH2 1401 aa24.47■■□□□ 1.51
CSHL1-205ENST00000438387 CYB5RLQ6IPT4 315 aa24.47■■□□□ 1.51
CSHL1-205ENST00000438387 CUL7Q14999 1698 aa24.42■■□□□ 1.5
CSHL1-205ENST00000438387 SHROOM2Q13796 1616 aa24.39■■□□□ 1.5
CSHL1-205ENST00000438387 IGF1RP08069 1367 aa24.37■■□□□ 1.49
CSHL1-205ENST00000438387 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
CSHL1-205ENST00000438387 ERCC6L2Q5T890 1561 aa24.29■■□□□ 1.48
CSHL1-205ENST00000438387 CARMIL1Q5VZK9 1371 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms