RNA–Protein interactions for RNA: ENST00000356371.9

FAM149A-202, Transcript of family with sequence similarity 149 member A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene FAM149A, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM149A-202ENST00000356371 NISCHQ9Y2I1 1504 aa30.73■■■□□ 2.51
FAM149A-202ENST00000356371 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
FAM149A-202ENST00000356371 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
FAM149A-202ENST00000356371 ZCCHC6Q5VYS8 1495 aaKnown RBP25.99■■□□□ 1.75
FAM149A-202ENST00000356371 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
FAM149A-202ENST00000356371 CCDC180Q9P1Z9 1646 aa25.83■■□□□ 1.73
FAM149A-202ENST00000356371 CHIC1Q5VXU3 224 aa25.54■■□□□ 1.68
FAM149A-202ENST00000356371 MYO15BQ96JP2 1530 aa25.48■■□□□ 1.67
FAM149A-202ENST00000356371 PCGF6Q9BYE7 350 aa25.11■■□□□ 1.61
FAM149A-202ENST00000356371 HRCP23327 699 aa25.08■■□□□ 1.61
FAM149A-202ENST00000356371 DCAF1Q9Y4B6 1507 aa25.01■■□□□ 1.59
FAM149A-202ENST00000356371 LOC105371045A0A1W2PR82 267 aa24.96■■□□□ 1.59
FAM149A-202ENST00000356371 PPARGC1BQ86YN6 1023 aaKnown RBP24.75■■□□□ 1.55
FAM149A-202ENST00000356371 SCRIBQ14160 1630 aa24.56■■□□□ 1.52
FAM149A-202ENST00000356371 ABCC9O60706 1549 aa24.54■■□□□ 1.52
FAM149A-202ENST00000356371 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
FAM149A-202ENST00000356371 FAM9AQ8IZU1 332 aaPredicted RBP24.42■■□□□ 1.5
FAM149A-202ENST00000356371 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
FAM149A-202ENST00000356371 TRIM26Q12899 539 aaPredicted RBP24.4■■□□□ 1.5
FAM149A-202ENST00000356371 EHMT2Q96KQ7 1210 aa24.36■■□□□ 1.49
FAM149A-202ENST00000356371 RB1CC1Q8TDY2 1594 aa24.27■■□□□ 1.48
FAM149A-202ENST00000356371 CECR2Q9BXF3 1484 aa24.12■■□□□ 1.45
FAM149A-202ENST00000356371 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
FAM149A-202ENST00000356371 NACADO15069 1562 aa23.92■■□□□ 1.42
FAM149A-202ENST00000356371 WIZO95785 1651 aa23.88■■□□□ 1.41
FAM149A-202ENST00000356371 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
FAM149A-202ENST00000356371 BAZ1AQ9NRL2 1556 aaPredicted RBP23.6■■□□□ 1.37
FAM149A-202ENST00000356371 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
FAM149A-202ENST00000356371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.57■■□□□ 1.36
FAM149A-202ENST00000356371 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
FAM149A-202ENST00000356371 CCER1Q8TC90 406 aaPredicted RBP23.47■■□□□ 1.35
FAM149A-202ENST00000356371 EIF4G1Q04637 1599 aaKnown RBP23.46■■□□□ 1.35
FAM149A-202ENST00000356371 CCDC88BA6NC98 1476 aa23.44■■□□□ 1.34
FAM149A-202ENST00000356371 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
FAM149A-202ENST00000356371 SMARCA4P51532 1647 aa23.34■■□□□ 1.33
FAM149A-202ENST00000356371 SOGA1O94964 1423 aa23.34■■□□□ 1.33
FAM149A-202ENST00000356371 SCAF1Q9H7N4 1312 aaKnown RBP23.31■■□□□ 1.32
FAM149A-202ENST00000356371 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
FAM149A-202ENST00000356371 SMARCA2P51531 1590 aa23.3■■□□□ 1.32
FAM149A-202ENST00000356371 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
FAM149A-202ENST00000356371 CEP162Q5TB80 1403 aa23.26■■□□□ 1.31
FAM149A-202ENST00000356371 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
FAM149A-202ENST00000356371 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
FAM149A-202ENST00000356371 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
FAM149A-202ENST00000356371 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.3
FAM149A-202ENST00000356371 WRNQ14191 1432 aaPredicted RBP eCLIP23.14■■□□□ 1.29
FAM149A-202ENST00000356371 DIEXFQ68CQ4 756 aaKnown RBP23.07■■□□□ 1.28
FAM149A-202ENST00000356371 EEA1Q15075 1411 aa23.01■■□□□ 1.27
FAM149A-202ENST00000356371 NEUROD1Q13562 356 aa23■■□□□ 1.27
FAM149A-202ENST00000356371 RANGAP1P46060 587 aaPredicted RBP22.98■■□□□ 1.27
FAM149A-202ENST00000356371 GOLGA3Q08378 1498 aa22.97■■□□□ 1.27
FAM149A-202ENST00000356371 ACIN1Q9UKV3 1341 aaKnown RBP22.97■■□□□ 1.27
FAM149A-202ENST00000356371 HNRNPUL2Q1KMD3 747 aaKnown RBP22.94■■□□□ 1.26
FAM149A-202ENST00000356371 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
FAM149A-202ENST00000356371 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
FAM149A-202ENST00000356371 PELP1Q8IZL8 1130 aaKnown RBP22.82■■□□□ 1.24
FAM149A-202ENST00000356371 GTF3C3Q9Y5Q9 886 aa22.8■■□□□ 1.24
FAM149A-202ENST00000356371 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
FAM149A-202ENST00000356371 CLIP1P30622 1438 aa22.8■■□□□ 1.24
FAM149A-202ENST00000356371 ZNF316A6NFI3 1004 aaPredicted RBP22.8■■□□□ 1.24
FAM149A-202ENST00000356371 CENPBP07199 599 aaPredicted RBP22.79■■□□□ 1.24
FAM149A-202ENST00000356371 APLP2Q06481 763 aa22.76■■□□□ 1.23
FAM149A-202ENST00000356371 ATAD2BQ9ULI0 1458 aa22.75■■□□□ 1.23
FAM149A-202ENST00000356371 PEG3Q9GZU2 1588 aa22.75■■□□□ 1.23
FAM149A-202ENST00000356371 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
FAM149A-202ENST00000356371 YTHDC1Q96MU7 727 aaKnown RBP22.72■■□□□ 1.23
FAM149A-202ENST00000356371 RAPGEF2Q9Y4G8 1499 aa22.71■■□□□ 1.23
FAM149A-202ENST00000356371 KIF21BO75037 1637 aa22.68■■□□□ 1.22
FAM149A-202ENST00000356371 VPS8Q8N3P4 1428 aa22.66■■□□□ 1.22
FAM149A-202ENST00000356371 MIER1Q8N108 512 aa22.59■■□□□ 1.21
FAM149A-202ENST00000356371 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
FAM149A-202ENST00000356371 KANK4Q5T7N3 995 aaPredicted RBP22.44■■□□□ 1.18
FAM149A-202ENST00000356371 ARAP1Q96P48 1450 aa22.35■■□□□ 1.17
FAM149A-202ENST00000356371 PRXQ9BXM0 1461 aa22.35■■□□□ 1.17
FAM149A-202ENST00000356371 ITGAEP38570 1179 aa22.33■■□□□ 1.16
FAM149A-202ENST00000356371 BIVM-ERCC5R4GMW8 1640 aa22.32■■□□□ 1.16
FAM149A-202ENST00000356371 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
FAM149A-202ENST00000356371 CUX1P39880 1505 aa22.29■■□□□ 1.16
FAM149A-202ENST00000356371 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
FAM149A-202ENST00000356371 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
FAM149A-202ENST00000356371 NCAPD3P42695 1498 aa22.21■■□□□ 1.15
FAM149A-202ENST00000356371 CLSPNQ9HAW4 1339 aa22.16■■□□□ 1.14
FAM149A-202ENST00000356371 ARHGAP35Q9NRY4 1499 aa22.14■■□□□ 1.14
FAM149A-202ENST00000356371 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
FAM149A-202ENST00000356371 CCNB3Q8WWL7 1395 aa22.12■■□□□ 1.13
FAM149A-202ENST00000356371 RRBP1Q9P2E9 1410 aaKnown RBP22.12■■□□□ 1.13
FAM149A-202ENST00000356371 CFTRP13569 1480 aa22.12■■□□□ 1.13
FAM149A-202ENST00000356371 CUX2O14529 1486 aa22.07■■□□□ 1.12
FAM149A-202ENST00000356371 P3H3Q8IVL6 736 aa22.04■■□□□ 1.12
FAM149A-202ENST00000356371 ATP1B4Q9UN42 357 aaPredicted RBP22.04■■□□□ 1.12
FAM149A-202ENST00000356371 IGF1RP08069 1367 aa22.03■■□□□ 1.12
FAM149A-202ENST00000356371 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
FAM149A-202ENST00000356371 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
FAM149A-202ENST00000356371 CARMIL1Q5VZK9 1371 aa21.96■■□□□ 1.11
FAM149A-202ENST00000356371 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
FAM149A-202ENST00000356371 SIN3AQ96ST3 1273 aa21.9■■□□□ 1.1
FAM149A-202ENST00000356371 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
FAM149A-202ENST00000356371 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
FAM149A-202ENST00000356371 PHLDB1Q86UU1 1377 aa21.88■■□□□ 1.09
FAM149A-202ENST00000356371 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms