RNA–Protein interactions for RNA: ENST00000431717.6

C3orf52-202, Transcript of chromosome 3 open reading frame 52, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C3orf52, Length 2,054 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf52-202ENST00000431717 NISCHQ9Y2I1 1504 aa33.87■■■■□ 3.01
C3orf52-202ENST00000431717 CCDC180Q9P1Z9 1646 aa29.84■■■□□ 2.37
C3orf52-202ENST00000431717 ABCC9O60706 1549 aa28.95■■■□□ 2.22
C3orf52-202ENST00000431717 ZCCHC6Q5VYS8 1495 aaKnown RBP28.29■■■□□ 2.12
C3orf52-202ENST00000431717 DCAF8L2P0C7V8 631 aa28.24■■■□□ 2.11
C3orf52-202ENST00000431717 NACADO15069 1562 aa27.97■■■□□ 2.07
C3orf52-202ENST00000431717 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
C3orf52-202ENST00000431717 MYO15BQ96JP2 1530 aa27.91■■■□□ 2.06
C3orf52-202ENST00000431717 RB1CC1Q8TDY2 1594 aa27.91■■■□□ 2.06
C3orf52-202ENST00000431717 UNC13AQ9UPW8 1703 aa27.39■■□□□ 1.98
C3orf52-202ENST00000431717 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
C3orf52-202ENST00000431717 PABPN1Q86U42 306 aaKnown RBP eCLIP27.18■■□□□ 1.94
C3orf52-202ENST00000431717 BICRAQ9NZM4 1560 aa27.15■■□□□ 1.94
C3orf52-202ENST00000431717 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.93
C3orf52-202ENST00000431717 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
C3orf52-202ENST00000431717 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
C3orf52-202ENST00000431717 DNAJC5BQ9UF47 199 aa26.32■■□□□ 1.8
C3orf52-202ENST00000431717 SMARCA4P51532 1647 aa26.19■■□□□ 1.78
C3orf52-202ENST00000431717 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
C3orf52-202ENST00000431717 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
C3orf52-202ENST00000431717 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
C3orf52-202ENST00000431717 RSF1Q96T23 1441 aaPredicted RBP26■■□□□ 1.75
C3orf52-202ENST00000431717 ATAD2BQ9ULI0 1458 aa25.96■■□□□ 1.75
C3orf52-202ENST00000431717 WIZO95785 1651 aa25.91■■□□□ 1.74
C3orf52-202ENST00000431717 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
C3orf52-202ENST00000431717 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
C3orf52-202ENST00000431717 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
C3orf52-202ENST00000431717 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
C3orf52-202ENST00000431717 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
C3orf52-202ENST00000431717 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
C3orf52-202ENST00000431717 TOP2AP11388 1531 aaKnown RBP25.57■■□□□ 1.68
C3orf52-202ENST00000431717 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
C3orf52-202ENST00000431717 NESP48681 1621 aa25.21■■□□□ 1.63
C3orf52-202ENST00000431717 CADPSQ9ULU8 1353 aa25.14■■□□□ 1.61
C3orf52-202ENST00000431717 CFTRP13569 1480 aa25.08■■□□□ 1.6
C3orf52-202ENST00000431717 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
C3orf52-202ENST00000431717 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.57
C3orf52-202ENST00000431717 KIF21AQ7Z4S6 1674 aa24.87■■□□□ 1.57
C3orf52-202ENST00000431717 PRDM2Q13029 1718 aa24.86■■□□□ 1.57
C3orf52-202ENST00000431717 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
C3orf52-202ENST00000431717 ERCC6Q03468 1493 aa24.84■■□□□ 1.57
C3orf52-202ENST00000431717 CEP164Q9UPV0 1460 aa24.75■■□□□ 1.55
C3orf52-202ENST00000431717 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
C3orf52-202ENST00000431717 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
C3orf52-202ENST00000431717 URB2Q14146 1524 aaKnown RBP24.61■■□□□ 1.53
C3orf52-202ENST00000431717 ABCC8Q09428 1581 aa24.58■■□□□ 1.53
C3orf52-202ENST00000431717 WDR62O43379 1518 aa24.54■■□□□ 1.52
C3orf52-202ENST00000431717 CUX1P39880 1505 aa24.5■■□□□ 1.51
C3orf52-202ENST00000431717 TOPBP1Q92547 1522 aa24.5■■□□□ 1.51
C3orf52-202ENST00000431717 DNMBPQ6XZF7 1577 aa24.47■■□□□ 1.51
C3orf52-202ENST00000431717 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
C3orf52-202ENST00000431717 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
C3orf52-202ENST00000431717 CUX2O14529 1486 aa24.38■■□□□ 1.49
C3orf52-202ENST00000431717 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
C3orf52-202ENST00000431717 POLA1P09884 1462 aaPredicted RBP24.34■■□□□ 1.49
C3orf52-202ENST00000431717 FGD5Q6ZNL6 1462 aa24.34■■□□□ 1.49
C3orf52-202ENST00000431717 BIVM-ERCC5R4GMW8 1640 aa24.33■■□□□ 1.49
C3orf52-202ENST00000431717 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
C3orf52-202ENST00000431717 SOGA1O94964 1423 aa24.23■■□□□ 1.47
C3orf52-202ENST00000431717 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
C3orf52-202ENST00000431717 TARBP1Q13395 1621 aaKnown RBP24.22■■□□□ 1.47
C3orf52-202ENST00000431717 TRIM41Q8WV44 630 aa24.2■■□□□ 1.47
C3orf52-202ENST00000431717 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
C3orf52-202ENST00000431717 ZNF608Q9ULD9 1512 aaPredicted RBP24.17■■□□□ 1.46
C3orf52-202ENST00000431717 TDRD9Q8NDG6 1382 aaKnown RBP24.11■■□□□ 1.45
C3orf52-202ENST00000431717 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
C3orf52-202ENST00000431717 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
C3orf52-202ENST00000431717 AQRO60306 1485 aaKnown RBP eCLIP24.08■■□□□ 1.45
C3orf52-202ENST00000431717 EIF4G3O43432 1585 aaKnown RBP24.03■■□□□ 1.44
C3orf52-202ENST00000431717 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
C3orf52-202ENST00000431717 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.42
C3orf52-202ENST00000431717 GAPVD1Q14C86 1478 aa23.95■■□□□ 1.42
C3orf52-202ENST00000431717 KIF27Q86VH2 1401 aa23.89■■□□□ 1.41
C3orf52-202ENST00000431717 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
C3orf52-202ENST00000431717 GRIN2BQ13224 1484 aa23.86■■□□□ 1.41
C3orf52-202ENST00000431717 IGF1RP08069 1367 aa23.82■■□□□ 1.4
C3orf52-202ENST00000431717 SNAPC4Q5SXM2 1469 aa23.81■■□□□ 1.4
C3orf52-202ENST00000431717 FAM9AQ8IZU1 332 aaPredicted RBP23.79■■□□□ 1.4
C3orf52-202ENST00000431717 ERICH3Q5RHP9 1530 aa23.78■■□□□ 1.4
C3orf52-202ENST00000431717 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
C3orf52-202ENST00000431717 MAGI1Q96QZ7 1491 aaPredicted RBP23.74■■□□□ 1.39
C3orf52-202ENST00000431717 FBLN2P98095 1184 aa23.71■■□□□ 1.39
C3orf52-202ENST00000431717 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
C3orf52-202ENST00000431717 CSRNP3Q8WYN3 585 aa23.67■■□□□ 1.38
C3orf52-202ENST00000431717 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
C3orf52-202ENST00000431717 CHD1O14646 1710 aa23.66■■□□□ 1.38
C3orf52-202ENST00000431717 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
C3orf52-202ENST00000431717 CARMIL1Q5VZK9 1371 aa23.66■■□□□ 1.38
C3orf52-202ENST00000431717 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
C3orf52-202ENST00000431717 EEA1Q15075 1411 aa23.65■■□□□ 1.38
C3orf52-202ENST00000431717 CUL7Q14999 1698 aa23.62■■□□□ 1.37
C3orf52-202ENST00000431717 GRIN2AQ12879 1464 aa23.58■■□□□ 1.36
C3orf52-202ENST00000431717 PRXQ9BXM0 1461 aa23.58■■□□□ 1.36
C3orf52-202ENST00000431717 RAPGEF2Q9Y4G8 1499 aa23.53■■□□□ 1.36
C3orf52-202ENST00000431717 OSCARQ8IYS5 282 aa23.53■■□□□ 1.36
C3orf52-202ENST00000431717 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
C3orf52-202ENST00000431717 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
C3orf52-202ENST00000431717 NUP160Q12769 1436 aa23.45■■□□□ 1.35
C3orf52-202ENST00000431717 KIF21BO75037 1637 aa23.42■■□□□ 1.34
C3orf52-202ENST00000431717 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms