RNA–Protein interactions for RNA: ENST00000522514.5

PCMTD1-207, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PCMTD1, Length 1,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-207ENST00000522514 NISCHQ9Y2I1 1504 aa34.8■■■■□ 3.16
PCMTD1-207ENST00000522514 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
PCMTD1-207ENST00000522514 ABCC9O60706 1549 aa30.36■■■□□ 2.45
PCMTD1-207ENST00000522514 AEBP2Q6ZN18 517 aaPredicted RBP29.78■■■□□ 2.36
PCMTD1-207ENST00000522514 CHIC1Q5VXU3 224 aa29.21■■■□□ 2.27
PCMTD1-207ENST00000522514 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
PCMTD1-207ENST00000522514 NACADO15069 1562 aa29.07■■■□□ 2.24
PCMTD1-207ENST00000522514 ZCCHC6Q5VYS8 1495 aaKnown RBP29.03■■■□□ 2.24
PCMTD1-207ENST00000522514 DCAF8L2P0C7V8 631 aa28.94■■■□□ 2.22
PCMTD1-207ENST00000522514 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
PCMTD1-207ENST00000522514 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
PCMTD1-207ENST00000522514 UNC13AQ9UPW8 1703 aa28.67■■■□□ 2.18
PCMTD1-207ENST00000522514 BICRAQ9NZM4 1560 aa28.38■■■□□ 2.13
PCMTD1-207ENST00000522514 SCRIBQ14160 1630 aa28.33■■■□□ 2.13
PCMTD1-207ENST00000522514 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
PCMTD1-207ENST00000522514 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.06
PCMTD1-207ENST00000522514 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.06
PCMTD1-207ENST00000522514 EIF4G1Q04637 1599 aaKnown RBP27.56■■■□□ 2
PCMTD1-207ENST00000522514 CC2D2AQ9P2K1 1620 aa27.48■■□□□ 1.99
PCMTD1-207ENST00000522514 CECR2Q9BXF3 1484 aa27.23■■□□□ 1.95
PCMTD1-207ENST00000522514 SMARCA4P51532 1647 aa27.07■■□□□ 1.92
PCMTD1-207ENST00000522514 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.9
PCMTD1-207ENST00000522514 MROH2BQ7Z745 1585 aa26.88■■□□□ 1.89
PCMTD1-207ENST00000522514 ATAD2BQ9ULI0 1458 aa26.87■■□□□ 1.89
PCMTD1-207ENST00000522514 NCAPD3P42695 1498 aa26.81■■□□□ 1.88
PCMTD1-207ENST00000522514 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
PCMTD1-207ENST00000522514 PEG3Q9GZU2 1588 aa26.76■■□□□ 1.87
PCMTD1-207ENST00000522514 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
PCMTD1-207ENST00000522514 WIZO95785 1651 aa26.63■■□□□ 1.85
PCMTD1-207ENST00000522514 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
PCMTD1-207ENST00000522514 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
PCMTD1-207ENST00000522514 NESP48681 1621 aa26.31■■□□□ 1.8
PCMTD1-207ENST00000522514 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
PCMTD1-207ENST00000522514 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.78
PCMTD1-207ENST00000522514 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
PCMTD1-207ENST00000522514 KIF21AQ7Z4S6 1674 aa26.04■■□□□ 1.76
PCMTD1-207ENST00000522514 CADPSQ9ULU8 1353 aa26■■□□□ 1.75
PCMTD1-207ENST00000522514 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.74
PCMTD1-207ENST00000522514 CCDC88BA6NC98 1476 aa25.94■■□□□ 1.74
PCMTD1-207ENST00000522514 CFTRP13569 1480 aa25.89■■□□□ 1.73
PCMTD1-207ENST00000522514 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
PCMTD1-207ENST00000522514 PRDM2Q13029 1718 aa25.83■■□□□ 1.72
PCMTD1-207ENST00000522514 CUX2O14529 1486 aa25.82■■□□□ 1.72
PCMTD1-207ENST00000522514 FANCD2Q9BXW9 1451 aa25.77■■□□□ 1.72
PCMTD1-207ENST00000522514 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
PCMTD1-207ENST00000522514 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
PCMTD1-207ENST00000522514 PHF23Q9BUL5 403 aaPredicted RBP25.72■■□□□ 1.71
PCMTD1-207ENST00000522514 MRC2Q9UBG0 1479 aa25.71■■□□□ 1.71
PCMTD1-207ENST00000522514 WDR62O43379 1518 aa25.67■■□□□ 1.7
PCMTD1-207ENST00000522514 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
PCMTD1-207ENST00000522514 TOPBP1Q92547 1522 aa25.38■■□□□ 1.65
PCMTD1-207ENST00000522514 DNMBPQ6XZF7 1577 aa25.35■■□□□ 1.65
PCMTD1-207ENST00000522514 SENP3Q9H4L4 574 aaPredicted RBP25.23■■□□□ 1.63
PCMTD1-207ENST00000522514 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
PCMTD1-207ENST00000522514 CUX1P39880 1505 aa25.22■■□□□ 1.63
PCMTD1-207ENST00000522514 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
PCMTD1-207ENST00000522514 POLA1P09884 1462 aaPredicted RBP25.16■■□□□ 1.62
PCMTD1-207ENST00000522514 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
PCMTD1-207ENST00000522514 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
PCMTD1-207ENST00000522514 FGD5Q6ZNL6 1462 aa25.1■■□□□ 1.61
PCMTD1-207ENST00000522514 EIF4G3O43432 1585 aaKnown RBP25.09■■□□□ 1.61
PCMTD1-207ENST00000522514 RAD54L2Q9Y4B4 1467 aa25.07■■□□□ 1.6
PCMTD1-207ENST00000522514 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
PCMTD1-207ENST00000522514 DNAJC5Q9H3Z4 198 aa25.02■■□□□ 1.6
PCMTD1-207ENST00000522514 WDR97A6NE52 1622 aa25.01■■□□□ 1.59
PCMTD1-207ENST00000522514 BIVM-ERCC5R4GMW8 1640 aa25■■□□□ 1.59
PCMTD1-207ENST00000522514 SOGA1O94964 1423 aa24.97■■□□□ 1.59
PCMTD1-207ENST00000522514 TOP2BQ02880 1626 aa24.96■■□□□ 1.59
PCMTD1-207ENST00000522514 AQRO60306 1485 aaKnown RBP eCLIP24.95■■□□□ 1.58
PCMTD1-207ENST00000522514 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.58
PCMTD1-207ENST00000522514 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
PCMTD1-207ENST00000522514 ABCA5Q8WWZ7 1642 aa24.83■■□□□ 1.56
PCMTD1-207ENST00000522514 ABCA10Q8WWZ4 1543 aa24.82■■□□□ 1.56
PCMTD1-207ENST00000522514 CHD1O14646 1710 aa24.81■■□□□ 1.56
PCMTD1-207ENST00000522514 PBRM1Q86U86 1689 aa24.81■■□□□ 1.56
PCMTD1-207ENST00000522514 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
PCMTD1-207ENST00000522514 GAPVD1Q14C86 1478 aa24.71■■□□□ 1.55
PCMTD1-207ENST00000522514 GRIN2BQ13224 1484 aa24.7■■□□□ 1.55
PCMTD1-207ENST00000522514 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
PCMTD1-207ENST00000522514 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
PCMTD1-207ENST00000522514 ADAMTS12P58397 1594 aa24.59■■□□□ 1.53
PCMTD1-207ENST00000522514 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
PCMTD1-207ENST00000522514 FBLN2P98095 1184 aa24.55■■□□□ 1.52
PCMTD1-207ENST00000522514 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
PCMTD1-207ENST00000522514 CLASP1Q7Z460 1538 aa24.49■■□□□ 1.51
PCMTD1-207ENST00000522514 RIMBP3CA6NJZ7 1639 aa24.47■■□□□ 1.51
PCMTD1-207ENST00000522514 RIMBP3BA6NNM3 1639 aa24.47■■□□□ 1.51
PCMTD1-207ENST00000522514 RIMBP3Q9UFD9 1639 aa24.47■■□□□ 1.51
PCMTD1-207ENST00000522514 CHMP7Q8WUX9 453 aaPredicted RBP24.44■■□□□ 1.5
PCMTD1-207ENST00000522514 GRIN2AQ12879 1464 aa24.44■■□□□ 1.5
PCMTD1-207ENST00000522514 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
PCMTD1-207ENST00000522514 FHAD1B1AJZ9 1412 aa24.41■■□□□ 1.5
PCMTD1-207ENST00000522514 CEP170Q5SW79 1584 aa24.39■■□□□ 1.5
PCMTD1-207ENST00000522514 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
PCMTD1-207ENST00000522514 CUL7Q14999 1698 aa24.32■■□□□ 1.48
PCMTD1-207ENST00000522514 NUP160Q12769 1436 aa24.32■■□□□ 1.48
PCMTD1-207ENST00000522514 IGF1RP08069 1367 aa24.31■■□□□ 1.48
PCMTD1-207ENST00000522514 RUSC2Q8N2Y8 1516 aa24.31■■□□□ 1.48
PCMTD1-207ENST00000522514 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
PCMTD1-207ENST00000522514 ERCC6L2Q5T890 1561 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms