RNA–Protein interactions for RNA: ENST00000504030.6

HTR3A-205, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTR3A, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-205ENST00000504030 NISCHQ9Y2I1 1504 aa31.6■■■□□ 2.65
HTR3A-205ENST00000504030 CCDC180Q9P1Z9 1646 aa27■■□□□ 1.91
HTR3A-205ENST00000504030 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
HTR3A-205ENST00000504030 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.86
HTR3A-205ENST00000504030 DCAF8L2P0C7V8 631 aa26.24■■□□□ 1.79
HTR3A-205ENST00000504030 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
HTR3A-205ENST00000504030 DCAF1Q9Y4B6 1507 aa25.9■■□□□ 1.74
HTR3A-205ENST00000504030 ABCC9O60706 1549 aa25.45■■□□□ 1.66
HTR3A-205ENST00000504030 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
HTR3A-205ENST00000504030 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
HTR3A-205ENST00000504030 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
HTR3A-205ENST00000504030 NACADO15069 1562 aa25.07■■□□□ 1.6
HTR3A-205ENST00000504030 RSF1Q96T23 1441 aaPredicted RBP24.91■■□□□ 1.58
HTR3A-205ENST00000504030 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
HTR3A-205ENST00000504030 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
HTR3A-205ENST00000504030 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.53
HTR3A-205ENST00000504030 LOC105371045A0A1W2PR82 267 aa24.57■■□□□ 1.52
HTR3A-205ENST00000504030 WIZO95785 1651 aa24.47■■□□□ 1.51
HTR3A-205ENST00000504030 UNC13AQ9UPW8 1703 aa24.37■■□□□ 1.49
HTR3A-205ENST00000504030 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
HTR3A-205ENST00000504030 PCGF6Q9BYE7 350 aa24.33■■□□□ 1.48
HTR3A-205ENST00000504030 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
HTR3A-205ENST00000504030 FAM9AQ8IZU1 332 aaPredicted RBP24.19■■□□□ 1.46
HTR3A-205ENST00000504030 HRCP23327 699 aa24.15■■□□□ 1.46
HTR3A-205ENST00000504030 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
HTR3A-205ENST00000504030 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
HTR3A-205ENST00000504030 TOP2AP11388 1531 aaKnown RBP24.05■■□□□ 1.44
HTR3A-205ENST00000504030 EIF4G1Q04637 1599 aaKnown RBP24.05■■□□□ 1.44
HTR3A-205ENST00000504030 EHMT2Q96KQ7 1210 aa24.02■■□□□ 1.44
HTR3A-205ENST00000504030 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
HTR3A-205ENST00000504030 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
HTR3A-205ENST00000504030 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
HTR3A-205ENST00000504030 TRIM26Q12899 539 aaPredicted RBP23.88■■□□□ 1.41
HTR3A-205ENST00000504030 ABCC8Q09428 1581 aa23.85■■□□□ 1.41
HTR3A-205ENST00000504030 PPARGC1BQ86YN6 1023 aaKnown RBP23.75■■□□□ 1.39
HTR3A-205ENST00000504030 PEG3Q9GZU2 1588 aa23.66■■□□□ 1.38
HTR3A-205ENST00000504030 ATAD2BQ9ULI0 1458 aa23.54■■□□□ 1.36
HTR3A-205ENST00000504030 SOGA1O94964 1423 aa23.54■■□□□ 1.36
HTR3A-205ENST00000504030 BAZ1BQ9UIG0 1483 aaKnown RBP23.47■■□□□ 1.35
HTR3A-205ENST00000504030 RUSC2Q8N2Y8 1516 aa23.46■■□□□ 1.35
HTR3A-205ENST00000504030 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
HTR3A-205ENST00000504030 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
HTR3A-205ENST00000504030 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
HTR3A-205ENST00000504030 EEA1Q15075 1411 aa23.32■■□□□ 1.32
HTR3A-205ENST00000504030 CEP162Q5TB80 1403 aa23.32■■□□□ 1.32
HTR3A-205ENST00000504030 TNIKQ9UKE5 1360 aa23.26■■□□□ 1.31
HTR3A-205ENST00000504030 UBTFP17480 764 aaKnown RBP23.24■■□□□ 1.31
HTR3A-205ENST00000504030 ZEB1P37275 1124 aaPredicted RBP23.21■■□□□ 1.31
HTR3A-205ENST00000504030 GOLGA3Q08378 1498 aa23.2■■□□□ 1.3
HTR3A-205ENST00000504030 TTBK1Q5TCY1 1321 aaPredicted RBP23.2■■□□□ 1.3
HTR3A-205ENST00000504030 NCAPD3P42695 1498 aa23.15■■□□□ 1.3
HTR3A-205ENST00000504030 HMGXB3Q12766 1538 aa23.1■■□□□ 1.29
HTR3A-205ENST00000504030 KIF21BO75037 1637 aa23.09■■□□□ 1.29
HTR3A-205ENST00000504030 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
HTR3A-205ENST00000504030 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
HTR3A-205ENST00000504030 CC2D2AQ9P2K1 1620 aa23.03■■□□□ 1.28
HTR3A-205ENST00000504030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
HTR3A-205ENST00000504030 BIVM-ERCC5R4GMW8 1640 aa23.01■■□□□ 1.27
HTR3A-205ENST00000504030 RAPGEF2Q9Y4G8 1499 aa22.98■■□□□ 1.27
HTR3A-205ENST00000504030 CLIP1P30622 1438 aa22.93■■□□□ 1.26
HTR3A-205ENST00000504030 CCER1Q8TC90 406 aaPredicted RBP22.91■■□□□ 1.26
HTR3A-205ENST00000504030 CUX1P39880 1505 aa22.9■■□□□ 1.26
HTR3A-205ENST00000504030 RANGAP1P46060 587 aaPredicted RBP22.88■■□□□ 1.25
HTR3A-205ENST00000504030 CFTRP13569 1480 aa22.87■■□□□ 1.25
HTR3A-205ENST00000504030 VPS8Q8N3P4 1428 aa22.8■■□□□ 1.24
HTR3A-205ENST00000504030 PRDM2Q13029 1718 aa22.77■■□□□ 1.23
HTR3A-205ENST00000504030 PRXQ9BXM0 1461 aa22.75■■□□□ 1.23
HTR3A-205ENST00000504030 ERICH3Q5RHP9 1530 aa22.74■■□□□ 1.23
HTR3A-205ENST00000504030 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
HTR3A-205ENST00000504030 APLP2Q06481 763 aa22.65■■□□□ 1.22
HTR3A-205ENST00000504030 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
HTR3A-205ENST00000504030 HNRNPUL2Q1KMD3 747 aaKnown RBP22.61■■□□□ 1.21
HTR3A-205ENST00000504030 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
HTR3A-205ENST00000504030 CUX2O14529 1486 aa22.55■■□□□ 1.2
HTR3A-205ENST00000504030 FGD5Q6ZNL6 1462 aa22.52■■□□□ 1.2
HTR3A-205ENST00000504030 DNAJC5BQ9UF47 199 aa22.48■■□□□ 1.19
HTR3A-205ENST00000504030 IGF1RP08069 1367 aa22.46■■□□□ 1.19
HTR3A-205ENST00000504030 FANCD2Q9BXW9 1451 aa22.45■■□□□ 1.18
HTR3A-205ENST00000504030 ARHGAP35Q9NRY4 1499 aa22.44■■□□□ 1.18
HTR3A-205ENST00000504030 KANK4Q5T7N3 995 aaPredicted RBP22.43■■□□□ 1.18
HTR3A-205ENST00000504030 NESP48681 1621 aa22.4■■□□□ 1.18
HTR3A-205ENST00000504030 CARMIL1Q5VZK9 1371 aa22.37■■□□□ 1.17
HTR3A-205ENST00000504030 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
HTR3A-205ENST00000504030 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
HTR3A-205ENST00000504030 RAD54L2Q9Y4B4 1467 aa22.32■■□□□ 1.16
HTR3A-205ENST00000504030 DNMBPQ6XZF7 1577 aa22.32■■□□□ 1.16
HTR3A-205ENST00000504030 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
HTR3A-205ENST00000504030 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
HTR3A-205ENST00000504030 RRBP1Q9P2E9 1410 aaKnown RBP22.22■■□□□ 1.15
HTR3A-205ENST00000504030 ABCA10Q8WWZ4 1543 aa22.22■■□□□ 1.15
HTR3A-205ENST00000504030 ZNF316A6NFI3 1004 aaPredicted RBP22.22■■□□□ 1.15
HTR3A-205ENST00000504030 TIAM1Q13009 1591 aa22.18■■□□□ 1.14
HTR3A-205ENST00000504030 PDS5BQ9NTI5 1447 aa22.17■■□□□ 1.14
HTR3A-205ENST00000504030 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
HTR3A-205ENST00000504030 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
HTR3A-205ENST00000504030 CCNB3Q8WWL7 1395 aa22.15■■□□□ 1.14
HTR3A-205ENST00000504030 DHX57Q6P158 1386 aaKnown RBP22.14■■□□□ 1.13
HTR3A-205ENST00000504030 SCAF1Q9H7N4 1312 aaKnown RBP22.13■■□□□ 1.13
HTR3A-205ENST00000504030 ITGAEP38570 1179 aa22.12■■□□□ 1.13
HTR3A-205ENST00000504030 PCF11O94913 1555 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms