RNA–Protein interactions for RNA: ENST00000456580.6

CAPN5-202, Transcript of calpain 5, humanhuman

TSL 2 BASIC

Gene CAPN5, Length 2,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-202ENST00000456580 NISCHQ9Y2I1 1504 aa30.85■■■□□ 2.53
CAPN5-202ENST00000456580 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
CAPN5-202ENST00000456580 SUPT5HO00267 1087 aaKnown RBP26.57■■□□□ 1.84
CAPN5-202ENST00000456580 DCAF8L2P0C7V8 631 aa26.13■■□□□ 1.77
CAPN5-202ENST00000456580 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
CAPN5-202ENST00000456580 CCDC180Q9P1Z9 1646 aa25.83■■□□□ 1.73
CAPN5-202ENST00000456580 MYO15BQ96JP2 1530 aa25.81■■□□□ 1.72
CAPN5-202ENST00000456580 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
CAPN5-202ENST00000456580 PCGF6Q9BYE7 350 aa25.29■■□□□ 1.64
CAPN5-202ENST00000456580 LOC105371045A0A1W2PR82 267 aa25.24■■□□□ 1.63
CAPN5-202ENST00000456580 HRCP23327 699 aa25.19■■□□□ 1.62
CAPN5-202ENST00000456580 PPARGC1BQ86YN6 1023 aaKnown RBP25.08■■□□□ 1.61
CAPN5-202ENST00000456580 DCAF1Q9Y4B6 1507 aa24.98■■□□□ 1.59
CAPN5-202ENST00000456580 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
CAPN5-202ENST00000456580 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
CAPN5-202ENST00000456580 FAM9AQ8IZU1 332 aaPredicted RBP24.65■■□□□ 1.54
CAPN5-202ENST00000456580 ABCC9O60706 1549 aa24.64■■□□□ 1.54
CAPN5-202ENST00000456580 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
CAPN5-202ENST00000456580 TRIM41Q8WV44 630 aa24.48■■□□□ 1.51
CAPN5-202ENST00000456580 RB1CC1Q8TDY2 1594 aa24.48■■□□□ 1.51
CAPN5-202ENST00000456580 TRIM26Q12899 539 aaPredicted RBP24.44■■□□□ 1.5
CAPN5-202ENST00000456580 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
CAPN5-202ENST00000456580 MROH2BQ7Z745 1585 aa24.18■■□□□ 1.46
CAPN5-202ENST00000456580 WIZO95785 1651 aa24.08■■□□□ 1.45
CAPN5-202ENST00000456580 NACADO15069 1562 aa23.92■■□□□ 1.42
CAPN5-202ENST00000456580 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.42
CAPN5-202ENST00000456580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.78■■□□□ 1.4
CAPN5-202ENST00000456580 ZEB1P37275 1124 aaPredicted RBP23.74■■□□□ 1.39
CAPN5-202ENST00000456580 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
CAPN5-202ENST00000456580 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
CAPN5-202ENST00000456580 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.37
CAPN5-202ENST00000456580 EIF4G1Q04637 1599 aaKnown RBP23.64■■□□□ 1.37
CAPN5-202ENST00000456580 PABPN1Q86U42 306 aaKnown RBP eCLIP23.55■■□□□ 1.36
CAPN5-202ENST00000456580 SOGA1O94964 1423 aa23.54■■□□□ 1.36
CAPN5-202ENST00000456580 CCER1Q8TC90 406 aaPredicted RBP23.54■■□□□ 1.36
CAPN5-202ENST00000456580 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
CAPN5-202ENST00000456580 RUSC2Q8N2Y8 1516 aa23.49■■□□□ 1.35
CAPN5-202ENST00000456580 SMARCA4P51532 1647 aa23.45■■□□□ 1.34
CAPN5-202ENST00000456580 TOP2AP11388 1531 aaKnown RBP23.45■■□□□ 1.34
CAPN5-202ENST00000456580 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
CAPN5-202ENST00000456580 UNC13AQ9UPW8 1703 aa23.42■■□□□ 1.34
CAPN5-202ENST00000456580 CEP162Q5TB80 1403 aa23.37■■□□□ 1.33
CAPN5-202ENST00000456580 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
CAPN5-202ENST00000456580 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
CAPN5-202ENST00000456580 RANGAP1P46060 587 aaPredicted RBP23.23■■□□□ 1.31
CAPN5-202ENST00000456580 NEUROD1Q13562 356 aa23.19■■□□□ 1.3
CAPN5-202ENST00000456580 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
CAPN5-202ENST00000456580 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
CAPN5-202ENST00000456580 DIEXFQ68CQ4 756 aaKnown RBP23.15■■□□□ 1.3
CAPN5-202ENST00000456580 BICRAQ9NZM4 1560 aa23.11■■□□□ 1.29
CAPN5-202ENST00000456580 HNRNPUL2Q1KMD3 747 aaKnown RBP23.1■■□□□ 1.29
CAPN5-202ENST00000456580 ACIN1Q9UKV3 1341 aaKnown RBP23.04■■□□□ 1.28
CAPN5-202ENST00000456580 SYNJ1O43426 1573 aa23.04■■□□□ 1.28
CAPN5-202ENST00000456580 GOLGA3Q08378 1498 aa23.01■■□□□ 1.27
CAPN5-202ENST00000456580 GTF3C3Q9Y5Q9 886 aa22.94■■□□□ 1.26
CAPN5-202ENST00000456580 EEA1Q15075 1411 aa22.93■■□□□ 1.26
CAPN5-202ENST00000456580 YTHDC1Q96MU7 727 aaKnown RBP22.91■■□□□ 1.26
CAPN5-202ENST00000456580 RAPGEF2Q9Y4G8 1499 aa22.88■■□□□ 1.25
CAPN5-202ENST00000456580 CLIP1P30622 1438 aa22.87■■□□□ 1.25
CAPN5-202ENST00000456580 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
CAPN5-202ENST00000456580 ZNF316A6NFI3 1004 aaPredicted RBP22.84■■□□□ 1.25
CAPN5-202ENST00000456580 CEP164Q9UPV0 1460 aa22.82■■□□□ 1.24
CAPN5-202ENST00000456580 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
CAPN5-202ENST00000456580 PEG3Q9GZU2 1588 aa22.79■■□□□ 1.24
CAPN5-202ENST00000456580 MIER1Q8N108 512 aa22.76■■□□□ 1.23
CAPN5-202ENST00000456580 KIF21BO75037 1637 aa22.73■■□□□ 1.23
CAPN5-202ENST00000456580 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
CAPN5-202ENST00000456580 CENPBP07199 599 aaPredicted RBP22.71■■□□□ 1.23
CAPN5-202ENST00000456580 APLP2Q06481 763 aa22.69■■□□□ 1.22
CAPN5-202ENST00000456580 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
CAPN5-202ENST00000456580 PELP1Q8IZL8 1130 aaKnown RBP22.62■■□□□ 1.21
CAPN5-202ENST00000456580 TOP2BQ02880 1626 aa22.54■■□□□ 1.2
CAPN5-202ENST00000456580 ITGAEP38570 1179 aa22.5■■□□□ 1.19
CAPN5-202ENST00000456580 ARAP1Q96P48 1450 aa22.5■■□□□ 1.19
CAPN5-202ENST00000456580 CUX1P39880 1505 aa22.44■■□□□ 1.18
CAPN5-202ENST00000456580 PRXQ9BXM0 1461 aa22.43■■□□□ 1.18
CAPN5-202ENST00000456580 DHX57Q6P158 1386 aaKnown RBP22.42■■□□□ 1.18
CAPN5-202ENST00000456580 BIVM-ERCC5R4GMW8 1640 aa22.4■■□□□ 1.18
CAPN5-202ENST00000456580 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
CAPN5-202ENST00000456580 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.16
CAPN5-202ENST00000456580 KIF27Q86VH2 1401 aa22.27■■□□□ 1.16
CAPN5-202ENST00000456580 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
CAPN5-202ENST00000456580 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
CAPN5-202ENST00000456580 KCNH8Q96L42 1107 aa22.2■■□□□ 1.14
CAPN5-202ENST00000456580 CFTRP13569 1480 aa22.18■■□□□ 1.14
CAPN5-202ENST00000456580 RRBP1Q9P2E9 1410 aaKnown RBP22.18■■□□□ 1.14
CAPN5-202ENST00000456580 CCNB3Q8WWL7 1395 aa22.17■■□□□ 1.14
CAPN5-202ENST00000456580 CUX2O14529 1486 aa22.17■■□□□ 1.14
CAPN5-202ENST00000456580 ATP1B4Q9UN42 357 aaPredicted RBP22.16■■□□□ 1.14
CAPN5-202ENST00000456580 HMGXB3Q12766 1538 aa22.16■■□□□ 1.14
CAPN5-202ENST00000456580 IGF1RP08069 1367 aa22.14■■□□□ 1.14
CAPN5-202ENST00000456580 SIN3AQ96ST3 1273 aa22.1■■□□□ 1.13
CAPN5-202ENST00000456580 RAB3GAP2Q9H2M9 1393 aa22.1■■□□□ 1.13
CAPN5-202ENST00000456580 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
CAPN5-202ENST00000456580 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
CAPN5-202ENST00000456580 CLSPNQ9HAW4 1339 aa22.06■■□□□ 1.12
CAPN5-202ENST00000456580 PHLDB1Q86UU1 1377 aa22.04■■□□□ 1.12
CAPN5-202ENST00000456580 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
CAPN5-202ENST00000456580 FGD5Q6ZNL6 1462 aa22.02■■□□□ 1.11
CAPN5-202ENST00000456580 MAPKBP1O60336 1514 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms