RNA–Protein interactions for RNA: ENST00000542449.1

LINC02417-201, Transcript of long intergenic non-protein coding RNA 2417, humanhuman

TSL 2 BASIC

Gene LINC02417, Length 515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02417-201ENST00000542449 NISCHQ9Y2I1 1504 aa34.34■■■■□ 3.09
LINC02417-201ENST00000542449 CCDC180Q9P1Z9 1646 aa30.46■■■□□ 2.47
LINC02417-201ENST00000542449 ABCC9O60706 1549 aa30.28■■■□□ 2.44
LINC02417-201ENST00000542449 DCAF8L2P0C7V8 631 aa29.19■■■□□ 2.26
LINC02417-201ENST00000542449 RB1CC1Q8TDY2 1594 aa28.92■■■□□ 2.22
LINC02417-201ENST00000542449 NACADO15069 1562 aa28.82■■■□□ 2.2
LINC02417-201ENST00000542449 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
LINC02417-201ENST00000542449 MYO15BQ96JP2 1530 aa28.5■■■□□ 2.15
LINC02417-201ENST00000542449 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
LINC02417-201ENST00000542449 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
LINC02417-201ENST00000542449 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
LINC02417-201ENST00000542449 DNAJC5BQ9UF47 199 aa28.03■■■□□ 2.08
LINC02417-201ENST00000542449 BICRAQ9NZM4 1560 aa27.96■■■□□ 2.07
LINC02417-201ENST00000542449 SCRIBQ14160 1630 aa27.93■■■□□ 2.06
LINC02417-201ENST00000542449 SHROOM4Q9ULL8 1493 aa27.65■■■□□ 2.02
LINC02417-201ENST00000542449 EIF4G1Q04637 1599 aaKnown RBP27.3■■□□□ 1.96
LINC02417-201ENST00000542449 CC2D2AQ9P2K1 1620 aa27.26■■□□□ 1.95
LINC02417-201ENST00000542449 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
LINC02417-201ENST00000542449 NCAPD3P42695 1498 aa26.64■■□□□ 1.86
LINC02417-201ENST00000542449 ATAD2BQ9ULI0 1458 aa26.63■■□□□ 1.85
LINC02417-201ENST00000542449 SMARCA4P51532 1647 aa26.63■■□□□ 1.85
LINC02417-201ENST00000542449 BAZ1AQ9NRL2 1556 aaPredicted RBP26.63■■□□□ 1.85
LINC02417-201ENST00000542449 SMARCA2P51531 1590 aa26.56■■□□□ 1.84
LINC02417-201ENST00000542449 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
LINC02417-201ENST00000542449 BAZ1BQ9UIG0 1483 aaKnown RBP26.43■■□□□ 1.82
LINC02417-201ENST00000542449 HMGXB3Q12766 1538 aa26.39■■□□□ 1.82
LINC02417-201ENST00000542449 PEG3Q9GZU2 1588 aa26.32■■□□□ 1.8
LINC02417-201ENST00000542449 ERCC6Q03468 1493 aa26.16■■□□□ 1.78
LINC02417-201ENST00000542449 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
LINC02417-201ENST00000542449 WIZO95785 1651 aa26.14■■□□□ 1.78
LINC02417-201ENST00000542449 NESP48681 1621 aa26.1■■□□□ 1.77
LINC02417-201ENST00000542449 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
LINC02417-201ENST00000542449 LAMC3Q9Y6N6 1575 aa25.9■■□□□ 1.74
LINC02417-201ENST00000542449 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
LINC02417-201ENST00000542449 TOP2AP11388 1531 aaKnown RBP25.85■■□□□ 1.73
LINC02417-201ENST00000542449 CUX2O14529 1486 aa25.83■■□□□ 1.73
LINC02417-201ENST00000542449 CFTRP13569 1480 aa25.65■■□□□ 1.7
LINC02417-201ENST00000542449 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
LINC02417-201ENST00000542449 KIF21AQ7Z4S6 1674 aa25.63■■□□□ 1.69
LINC02417-201ENST00000542449 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
LINC02417-201ENST00000542449 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
LINC02417-201ENST00000542449 THOC2Q8NI27 1593 aaKnown RBP25.58■■□□□ 1.69
LINC02417-201ENST00000542449 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
LINC02417-201ENST00000542449 CEP164Q9UPV0 1460 aa25.57■■□□□ 1.68
LINC02417-201ENST00000542449 DNAJC5Q9H3Z4 198 aa25.44■■□□□ 1.66
LINC02417-201ENST00000542449 WDR62O43379 1518 aa25.4■■□□□ 1.66
LINC02417-201ENST00000542449 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
LINC02417-201ENST00000542449 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
LINC02417-201ENST00000542449 ABCC8Q09428 1581 aa25.14■■□□□ 1.62
LINC02417-201ENST00000542449 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
LINC02417-201ENST00000542449 IFT140Q96RY7 1462 aa25.05■■□□□ 1.6
LINC02417-201ENST00000542449 DNMBPQ6XZF7 1577 aa25.03■■□□□ 1.6
LINC02417-201ENST00000542449 ZNF608Q9ULD9 1512 aaPredicted RBP24.95■■□□□ 1.58
LINC02417-201ENST00000542449 OSCARQ8IYS5 282 aa24.94■■□□□ 1.58
LINC02417-201ENST00000542449 SOGA1O94964 1423 aa24.91■■□□□ 1.58
LINC02417-201ENST00000542449 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
LINC02417-201ENST00000542449 RAD54L2Q9Y4B4 1467 aa24.86■■□□□ 1.57
LINC02417-201ENST00000542449 AQRO60306 1485 aaKnown RBP eCLIP24.85■■□□□ 1.57
LINC02417-201ENST00000542449 CUX1P39880 1505 aa24.84■■□□□ 1.57
LINC02417-201ENST00000542449 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.56
LINC02417-201ENST00000542449 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
LINC02417-201ENST00000542449 FBLN2P98095 1184 aa24.79■■□□□ 1.56
LINC02417-201ENST00000542449 TARBP1Q13395 1621 aaKnown RBP24.77■■□□□ 1.56
LINC02417-201ENST00000542449 EIF4G3O43432 1585 aaKnown RBP24.73■■□□□ 1.55
LINC02417-201ENST00000542449 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
LINC02417-201ENST00000542449 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
LINC02417-201ENST00000542449 CHMP7Q8WUX9 453 aaPredicted RBP24.63■■□□□ 1.53
LINC02417-201ENST00000542449 GRIN2BQ13224 1484 aa24.58■■□□□ 1.52
LINC02417-201ENST00000542449 GAPVD1Q14C86 1478 aa24.56■■□□□ 1.52
LINC02417-201ENST00000542449 SNAPC4Q5SXM2 1469 aa24.56■■□□□ 1.52
LINC02417-201ENST00000542449 ABCA10Q8WWZ4 1543 aa24.54■■□□□ 1.52
LINC02417-201ENST00000542449 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
LINC02417-201ENST00000542449 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
LINC02417-201ENST00000542449 SYNJ1O43426 1573 aa24.51■■□□□ 1.51
LINC02417-201ENST00000542449 MAGI1Q96QZ7 1491 aaPredicted RBP24.48■■□□□ 1.51
LINC02417-201ENST00000542449 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
LINC02417-201ENST00000542449 CHD1O14646 1710 aa24.43■■□□□ 1.5
LINC02417-201ENST00000542449 SYNJ2O15056 1496 aa24.41■■□□□ 1.5
LINC02417-201ENST00000542449 ABCA5Q8WWZ7 1642 aa24.36■■□□□ 1.49
LINC02417-201ENST00000542449 CYB5RLQ6IPT4 315 aa24.35■■□□□ 1.49
LINC02417-201ENST00000542449 ARHGEF11O15085 1522 aa24.33■■□□□ 1.49
LINC02417-201ENST00000542449 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
LINC02417-201ENST00000542449 RIMBP3CA6NJZ7 1639 aa24.32■■□□□ 1.48
LINC02417-201ENST00000542449 RIMBP3BA6NNM3 1639 aa24.32■■□□□ 1.48
LINC02417-201ENST00000542449 RIMBP3Q9UFD9 1639 aa24.32■■□□□ 1.48
LINC02417-201ENST00000542449 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
LINC02417-201ENST00000542449 ERICH3Q5RHP9 1530 aa24.23■■□□□ 1.47
LINC02417-201ENST00000542449 GRIN2AQ12879 1464 aa24.22■■□□□ 1.47
LINC02417-201ENST00000542449 KIF27Q86VH2 1401 aa24.21■■□□□ 1.47
LINC02417-201ENST00000542449 CLASP1Q7Z460 1538 aa24.19■■□□□ 1.46
LINC02417-201ENST00000542449 ADAMTS12P58397 1594 aa24.18■■□□□ 1.46
LINC02417-201ENST00000542449 IGF1RP08069 1367 aa24.16■■□□□ 1.46
LINC02417-201ENST00000542449 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
LINC02417-201ENST00000542449 NUP160Q12769 1436 aa24.1■■□□□ 1.45
LINC02417-201ENST00000542449 CEP170Q5SW79 1584 aa24.05■■□□□ 1.44
LINC02417-201ENST00000542449 JPH4Q96JJ6 628 aa24.04■■□□□ 1.44
LINC02417-201ENST00000542449 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
LINC02417-201ENST00000542449 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
LINC02417-201ENST00000542449 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.42
LINC02417-201ENST00000542449 CUL7Q14999 1698 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms