RNA–Protein interactions for RNA: ENST00000398189.3

APOF-201, Transcript of apolipoprotein F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOF, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOF-201ENST00000398189 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
APOF-201ENST00000398189 CCDC180Q9P1Z9 1646 aa28.81■■■□□ 2.2
APOF-201ENST00000398189 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
APOF-201ENST00000398189 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
APOF-201ENST00000398189 ABCC9O60706 1549 aa27.23■■□□□ 1.95
APOF-201ENST00000398189 DCAF8L2P0C7V8 631 aa27.13■■□□□ 1.93
APOF-201ENST00000398189 MYO15BQ96JP2 1530 aa26.97■■□□□ 1.91
APOF-201ENST00000398189 SHROOM4Q9ULL8 1493 aa26.82■■□□□ 1.88
APOF-201ENST00000398189 NACADO15069 1562 aa26.81■■□□□ 1.88
APOF-201ENST00000398189 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
APOF-201ENST00000398189 SCRIBQ14160 1630 aa26.46■■□□□ 1.83
APOF-201ENST00000398189 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
APOF-201ENST00000398189 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
APOF-201ENST00000398189 SUPT5HO00267 1087 aaKnown RBP25.74■■□□□ 1.71
APOF-201ENST00000398189 PABPN1Q86U42 306 aaKnown RBP eCLIP25.64■■□□□ 1.7
APOF-201ENST00000398189 CECR2Q9BXF3 1484 aa25.63■■□□□ 1.69
APOF-201ENST00000398189 RSF1Q96T23 1441 aaPredicted RBP25.55■■□□□ 1.68
APOF-201ENST00000398189 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
APOF-201ENST00000398189 BAZ1AQ9NRL2 1556 aaPredicted RBP25.46■■□□□ 1.67
APOF-201ENST00000398189 SMARCA4P51532 1647 aa25.38■■□□□ 1.65
APOF-201ENST00000398189 WIZO95785 1651 aa25.28■■□□□ 1.64
APOF-201ENST00000398189 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.6
APOF-201ENST00000398189 EIF4G1Q04637 1599 aaKnown RBP25.03■■□□□ 1.6
APOF-201ENST00000398189 TOP2AP11388 1531 aaKnown RBP25■■□□□ 1.59
APOF-201ENST00000398189 ATAD2BQ9ULI0 1458 aa24.94■■□□□ 1.58
APOF-201ENST00000398189 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
APOF-201ENST00000398189 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
APOF-201ENST00000398189 CCDC88BA6NC98 1476 aa24.73■■□□□ 1.55
APOF-201ENST00000398189 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
APOF-201ENST00000398189 HMGXB3Q12766 1538 aa24.72■■□□□ 1.55
APOF-201ENST00000398189 CC2D2AQ9P2K1 1620 aa24.68■■□□□ 1.54
APOF-201ENST00000398189 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
APOF-201ENST00000398189 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
APOF-201ENST00000398189 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
APOF-201ENST00000398189 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
APOF-201ENST00000398189 CFTRP13569 1480 aa24.18■■□□□ 1.46
APOF-201ENST00000398189 PRDM2Q13029 1718 aa24.12■■□□□ 1.45
APOF-201ENST00000398189 CADPSQ9ULU8 1353 aa24.08■■□□□ 1.45
APOF-201ENST00000398189 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
APOF-201ENST00000398189 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
APOF-201ENST00000398189 NESP48681 1621 aa23.92■■□□□ 1.42
APOF-201ENST00000398189 LAMC3Q9Y6N6 1575 aa23.92■■□□□ 1.42
APOF-201ENST00000398189 TOP2BQ02880 1626 aa23.89■■□□□ 1.41
APOF-201ENST00000398189 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
APOF-201ENST00000398189 CUX1P39880 1505 aa23.83■■□□□ 1.41
APOF-201ENST00000398189 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.41
APOF-201ENST00000398189 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
APOF-201ENST00000398189 SOGA1O94964 1423 aa23.73■■□□□ 1.39
APOF-201ENST00000398189 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
APOF-201ENST00000398189 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
APOF-201ENST00000398189 LOC105371045A0A1W2PR82 267 aa23.68■■□□□ 1.38
APOF-201ENST00000398189 KIF21AQ7Z4S6 1674 aa23.66■■□□□ 1.38
APOF-201ENST00000398189 EEA1Q15075 1411 aa23.66■■□□□ 1.38
APOF-201ENST00000398189 RUSC2Q8N2Y8 1516 aa23.66■■□□□ 1.38
APOF-201ENST00000398189 DNMBPQ6XZF7 1577 aa23.63■■□□□ 1.37
APOF-201ENST00000398189 TOPBP1Q92547 1522 aa23.58■■□□□ 1.37
APOF-201ENST00000398189 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
APOF-201ENST00000398189 URB2Q14146 1524 aaKnown RBP23.56■■□□□ 1.36
APOF-201ENST00000398189 CSRNP3Q8WYN3 585 aa23.5■■□□□ 1.35
APOF-201ENST00000398189 POLA1P09884 1462 aaPredicted RBP23.46■■□□□ 1.35
APOF-201ENST00000398189 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
APOF-201ENST00000398189 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
APOF-201ENST00000398189 EHMT2Q96KQ7 1210 aa23.42■■□□□ 1.34
APOF-201ENST00000398189 KIF21BO75037 1637 aa23.39■■□□□ 1.34
APOF-201ENST00000398189 CUX2O14529 1486 aa23.38■■□□□ 1.33
APOF-201ENST00000398189 RAD54L2Q9Y4B4 1467 aa23.37■■□□□ 1.33
APOF-201ENST00000398189 ABCA10Q8WWZ4 1543 aa23.36■■□□□ 1.33
APOF-201ENST00000398189 WDR97A6NE52 1622 aa23.34■■□□□ 1.33
APOF-201ENST00000398189 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
APOF-201ENST00000398189 GOLGA3Q08378 1498 aa23.34■■□□□ 1.33
APOF-201ENST00000398189 WDR62O43379 1518 aa23.33■■□□□ 1.32
APOF-201ENST00000398189 THOC2Q8NI27 1593 aaKnown RBP23.29■■□□□ 1.32
APOF-201ENST00000398189 PRXQ9BXM0 1461 aa23.28■■□□□ 1.32
APOF-201ENST00000398189 TARBP1Q13395 1621 aaKnown RBP23.26■■□□□ 1.31
APOF-201ENST00000398189 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
APOF-201ENST00000398189 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
APOF-201ENST00000398189 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
APOF-201ENST00000398189 IGF1RP08069 1367 aa23.22■■□□□ 1.31
APOF-201ENST00000398189 ABCA5Q8WWZ7 1642 aa23.2■■□□□ 1.3
APOF-201ENST00000398189 UBTFP17480 764 aaKnown RBP23.17■■□□□ 1.3
APOF-201ENST00000398189 CEP162Q5TB80 1403 aa23.13■■□□□ 1.29
APOF-201ENST00000398189 TDRD9Q8NDG6 1382 aaKnown RBP23.12■■□□□ 1.29
APOF-201ENST00000398189 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
APOF-201ENST00000398189 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
APOF-201ENST00000398189 CARMIL1Q5VZK9 1371 aa23.1■■□□□ 1.29
APOF-201ENST00000398189 CUL7Q14999 1698 aa23.1■■□□□ 1.29
APOF-201ENST00000398189 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
APOF-201ENST00000398189 ZNF608Q9ULD9 1512 aaPredicted RBP23.01■■□□□ 1.27
APOF-201ENST00000398189 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
APOF-201ENST00000398189 EIF4G3O43432 1585 aaKnown RBP22.96■■□□□ 1.27
APOF-201ENST00000398189 CLIP1P30622 1438 aa22.95■■□□□ 1.26
APOF-201ENST00000398189 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
APOF-201ENST00000398189 ADAMTS12P58397 1594 aa22.9■■□□□ 1.26
APOF-201ENST00000398189 FHAD1B1AJZ9 1412 aa22.86■■□□□ 1.25
APOF-201ENST00000398189 CTTNBP2Q8WZ74 1663 aa22.85■■□□□ 1.25
APOF-201ENST00000398189 RANGAP1P46060 587 aaPredicted RBP22.81■■□□□ 1.24
APOF-201ENST00000398189 SNAPC4Q5SXM2 1469 aa22.8■■□□□ 1.24
APOF-201ENST00000398189 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
APOF-201ENST00000398189 ARHGAP35Q9NRY4 1499 aa22.76■■□□□ 1.23
APOF-201ENST00000398189 MAGI1Q96QZ7 1491 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms