Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 CHMP1AP1-201ENST00000445563 662 ntBASIC15.47■□□□□ 0.07
RNF43Q68DV7 AC004898.1-201ENST00000451057 766 ntBASIC15.47■□□□□ 0.07
RNF43Q68DV7 AL591846.1-201ENST00000451736 433 ntBASIC15.47■□□□□ 0.07
RNF43Q68DV7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 AL391280.1-201ENST00000506969 1062 ntBASIC15.47■□□□□ 0.07
RNF43Q68DV7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 AC138696.2-201ENST00000607376 223 ntBASIC15.47■□□□□ 0.07
RNF43Q68DV7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 AL354989.2-201ENST00000435838 1540 ntBASIC15.47■□□□□ 0.07
RNF43Q68DV7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 EIF4HP1-201ENST00000453115 687 ntBASIC15.46■□□□□ 0.07
RNF43Q68DV7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 COX5BP1-201ENST00000507622 393 ntBASIC15.46■□□□□ 0.07
RNF43Q68DV7 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 MIR4741-201ENST00000579822 90 ntBASIC15.46■□□□□ 0.07
RNF43Q68DV7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 ZACNP1-201ENST00000612259 710 ntBASIC15.46■□□□□ 0.07
RNF43Q68DV7 AC005695.3-201ENST00000614522 232 ntBASIC15.46■□□□□ 0.07
RNF43Q68DV7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNF43Q68DV7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.46■□□□□ 0.07
RNF43Q68DV7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF43Q68DV7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.46■□□□□ 0.06
RNF43Q68DV7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF43Q68DV7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF43Q68DV7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RNF43Q68DV7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF43Q68DV7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNF43Q68DV7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF43Q68DV7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.46■□□□□ 0.06
RNF43Q68DV7 CICP17-201ENST00000418553 2377 ntBASIC15.46■□□□□ 0.06
RNF43Q68DV7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RNF43Q68DV7 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNF43Q68DV7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.45■□□□□ 0.06
RNF43Q68DV7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms