RNA–Protein interactions for RNA: ENST00000329008.9

CALN1-201, Transcript of calneuron 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALN1, Length 9,243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALN1-201ENST00000329008 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
CALN1-201ENST00000329008 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
CALN1-201ENST00000329008 PELP1Q8IZL8 1130 aaKnown RBP24.23■■□□□ 1.47
CALN1-201ENST00000329008 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
CALN1-201ENST00000329008 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
CALN1-201ENST00000329008 EHMT2Q96KQ7 1210 aa23.74■■□□□ 1.39
CALN1-201ENST00000329008 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.35
CALN1-201ENST00000329008 APLP2Q06481 763 aa23.36■■□□□ 1.33
CALN1-201ENST00000329008 CENPBP07199 599 aaPredicted RBP23.32■■□□□ 1.32
CALN1-201ENST00000329008 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.3
CALN1-201ENST00000329008 ZEB1P37275 1124 aaPredicted RBP23.18■■□□□ 1.3
CALN1-201ENST00000329008 MYT1Q01538 1121 aa23.17■■□□□ 1.3
CALN1-201ENST00000329008 TTBK1Q5TCY1 1321 aaPredicted RBP23.09■■□□□ 1.29
CALN1-201ENST00000329008 CCER1Q8TC90 406 aaPredicted RBP23.06■■□□□ 1.28
CALN1-201ENST00000329008 FAM9AQ8IZU1 332 aaPredicted RBP23.05■■□□□ 1.28
CALN1-201ENST00000329008 YTHDC1Q96MU7 727 aaKnown RBP22.72■■□□□ 1.23
CALN1-201ENST00000329008 NEFLP07196 543 aa22.69■■□□□ 1.22
CALN1-201ENST00000329008 TRIM41Q8WV44 630 aa22.63■■□□□ 1.21
CALN1-201ENST00000329008 RANGAP1P46060 587 aaPredicted RBP22.56■■□□□ 1.2
CALN1-201ENST00000329008 HRCP23327 699 aa22.41■■□□□ 1.18
CALN1-201ENST00000329008 TRIM26Q12899 539 aaPredicted RBP22.37■■□□□ 1.17
CALN1-201ENST00000329008 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
CALN1-201ENST00000329008 ATP1B4Q9UN42 357 aaPredicted RBP22.29■■□□□ 1.16
CALN1-201ENST00000329008 PPARGC1BQ86YN6 1023 aaKnown RBP22.2■■□□□ 1.14
CALN1-201ENST00000329008 DAXXQ9UER7 740 aaPredicted RBP22.07■■□□□ 1.12
CALN1-201ENST00000329008 LOC105371045A0A1W2PR82 267 aa21.79■■□□□ 1.08
CALN1-201ENST00000329008 DIEXFQ68CQ4 756 aaKnown RBP21.79■■□□□ 1.08
CALN1-201ENST00000329008 RTL5Q5HYW3 569 aaPredicted RBP21.75■■□□□ 1.07
CALN1-201ENST00000329008 ITGAEP38570 1179 aa21.73■■□□□ 1.07
CALN1-201ENST00000329008 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
CALN1-201ENST00000329008 POLR3GLQ9BT43 218 aa21.69■■□□□ 1.06
CALN1-201ENST00000329008 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
CALN1-201ENST00000329008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.64■■□□□ 1.06
CALN1-201ENST00000329008 ZNF316A6NFI3 1004 aaPredicted RBP21.62■■□□□ 1.05
CALN1-201ENST00000329008 GTF3C3Q9Y5Q9 886 aa21.55■■□□□ 1.04
CALN1-201ENST00000329008 CNGB1Q14028 1251 aaPredicted RBP21.49■■□□□ 1.03
CALN1-201ENST00000329008 CLSPNQ9HAW4 1339 aa21.4■■□□□ 1.02
CALN1-201ENST00000329008 BCANQ96GW7 911 aa21.38■■□□□ 1.01
CALN1-201ENST00000329008 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
CALN1-201ENST00000329008 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
CALN1-201ENST00000329008 ACIN1Q9UKV3 1341 aaKnown RBP21.21■□□□□ 0.99
CALN1-201ENST00000329008 ANP32CO43423 234 aa21.17■□□□□ 0.98
CALN1-201ENST00000329008 FAM50AQ14320 339 aaKnown RBP21.17■□□□□ 0.98
CALN1-201ENST00000329008 SLC4A1APQ9BWU0 796 aaKnown RBP21.16■□□□□ 0.98
CALN1-201ENST00000329008 NEUROD1Q13562 356 aa21.13■□□□□ 0.97
CALN1-201ENST00000329008 TRIM52Q96A61 297 aa21.01■□□□□ 0.95
CALN1-201ENST00000329008 ANP32AP39687 249 aaKnown RBP20.99■□□□□ 0.95
CALN1-201ENST00000329008 ZNF326Q5BKZ1 582 aaKnown RBP20.87■□□□□ 0.93
CALN1-201ENST00000329008 CANXP27824 592 aaKnown RBP20.84■□□□□ 0.93
CALN1-201ENST00000329008 ZBTB47Q9UFB7 747 aaPredicted RBP20.83■□□□□ 0.92
CALN1-201ENST00000329008 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
CALN1-201ENST00000329008 NPM2Q86SE8 214 aaKnown RBP20.77■□□□□ 0.92
CALN1-201ENST00000329008 EIF5BO60841 1220 aaKnown RBP20.75■□□□□ 0.91
CALN1-201ENST00000329008 FKBP8Q14318 412 aa20.74■□□□□ 0.91
CALN1-201ENST00000329008 SCAF1Q9H7N4 1312 aaKnown RBP20.62■□□□□ 0.89
CALN1-201ENST00000329008 GLIPR1L2Q4G1C9 344 aa20.62■□□□□ 0.89
CALN1-201ENST00000329008 ANP32BQ92688 251 aaKnown RBP20.61■□□□□ 0.89
CALN1-201ENST00000329008 BCL11AQ9H165 835 aa20.61■□□□□ 0.89
CALN1-201ENST00000329008 NBR1Q14596 966 aa20.54■□□□□ 0.88
CALN1-201ENST00000329008 HNRNPUQ00839 825 aaKnown RBP eCLIP20.52■□□□□ 0.88
CALN1-201ENST00000329008 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
CALN1-201ENST00000329008 NEFMP07197 916 aa20.49■□□□□ 0.87
CALN1-201ENST00000329008 HSP90AA1P07900 732 aaKnown RBP20.49■□□□□ 0.87
CALN1-201ENST00000329008 UPF2Q9HAU5 1272 aaKnown RBP20.47■□□□□ 0.87
CALN1-201ENST00000329008 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
CALN1-201ENST00000329008 SLC24A1O60721 1099 aa20.43■□□□□ 0.86
CALN1-201ENST00000329008 CSRNP3Q8WYN3 585 aa20.41■□□□□ 0.86
CALN1-201ENST00000329008 ABCC9O60706 1549 aa20.41■□□□□ 0.86
CALN1-201ENST00000329008 DDX10Q13206 875 aaKnown RBP20.39■□□□□ 0.86
CALN1-201ENST00000329008 FAM9BQ8IZU0 186 aa20.39■□□□□ 0.85
CALN1-201ENST00000329008 CCDC136Q96JN2 1154 aa20.38■□□□□ 0.85
CALN1-201ENST00000329008 PABPN1Q86U42 306 aaKnown RBP eCLIP20.36■□□□□ 0.85
CALN1-201ENST00000329008 SCRIBQ14160 1630 aa20.36■□□□□ 0.85
CALN1-201ENST00000329008 P3H3Q8IVL6 736 aa20.34■□□□□ 0.85
CALN1-201ENST00000329008 MIER1Q8N108 512 aa20.3■□□□□ 0.84
CALN1-201ENST00000329008 ARXQ96QS3 562 aa20.28■□□□□ 0.84
CALN1-201ENST00000329008 ARID3CA6NKF2 412 aa20.28■□□□□ 0.84
CALN1-201ENST00000329008 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
CALN1-201ENST00000329008 IRX6P78412 446 aaPredicted RBP20.21■□□□□ 0.83
CALN1-201ENST00000329008 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
CALN1-201ENST00000329008 FBLN2P98095 1184 aa20.2■□□□□ 0.82
CALN1-201ENST00000329008 ANP32EQ9BTT0 268 aa20.2■□□□□ 0.82
CALN1-201ENST00000329008 TMC1Q8TDI8 760 aa20.19■□□□□ 0.82
CALN1-201ENST00000329008 SALL2Q9Y467 1007 aaPredicted RBP20.19■□□□□ 0.82
CALN1-201ENST00000329008 MRS2Q9HD23 443 aa20.17■□□□□ 0.82
CALN1-201ENST00000329008 MYO15BQ96JP2 1530 aa20.17■□□□□ 0.82
CALN1-201ENST00000329008 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
CALN1-201ENST00000329008 DDRGK1Q96HY6 314 aa20.12■□□□□ 0.81
CALN1-201ENST00000329008 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.8
CALN1-201ENST00000329008 BECN1Q14457 450 aa20.04■□□□□ 0.8
CALN1-201ENST00000329008 TRIM44Q96DX7 344 aaPredicted RBP20■□□□□ 0.79
CALN1-201ENST00000329008 CLIP1P30622 1438 aa20■□□□□ 0.79
CALN1-201ENST00000329008 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
CALN1-201ENST00000329008 CHIC2Q9UKJ5 165 aa19.96■□□□□ 0.79
CALN1-201ENST00000329008 MYH16Q9H6N6 1097 aa19.95■□□□□ 0.78
CALN1-201ENST00000329008 EIF4G2P78344 907 aaKnown RBP eCLIP19.91■□□□□ 0.78
CALN1-201ENST00000329008 CEP162Q5TB80 1403 aa19.9■□□□□ 0.78
CALN1-201ENST00000329008 CHGAP10645 457 aaKnown RBP19.88■□□□□ 0.77
CALN1-201ENST00000329008 GOLGA6L22H0YM25 854 aa19.88■□□□□ 0.77
CALN1-201ENST00000329008 GOLGA3Q08378 1498 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms