RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
RAPGEF4-201ENST00000397081 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
RAPGEF4-201ENST00000397081 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.66
RAPGEF4-201ENST00000397081 DCAF8L2P0C7V8 631 aa25.08■■□□□ 1.6
RAPGEF4-201ENST00000397081 PCGF6Q9BYE7 350 aa24.47■■□□□ 1.51
RAPGEF4-201ENST00000397081 CCDC180Q9P1Z9 1646 aa24.15■■□□□ 1.46
RAPGEF4-201ENST00000397081 PPARGC1BQ86YN6 1023 aaKnown RBP24.12■■□□□ 1.45
RAPGEF4-201ENST00000397081 HRCP23327 699 aa24.1■■□□□ 1.45
RAPGEF4-201ENST00000397081 EHMT2Q96KQ7 1210 aa24.05■■□□□ 1.44
RAPGEF4-201ENST00000397081 CHIC1Q5VXU3 224 aa24.02■■□□□ 1.44
RAPGEF4-201ENST00000397081 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.41
RAPGEF4-201ENST00000397081 ZCCHC6Q5VYS8 1495 aaKnown RBP23.79■■□□□ 1.4
RAPGEF4-201ENST00000397081 ABCC9O60706 1549 aa23.77■■□□□ 1.4
RAPGEF4-201ENST00000397081 FAM9AQ8IZU1 332 aaPredicted RBP23.71■■□□□ 1.39
RAPGEF4-201ENST00000397081 MYO15BQ96JP2 1530 aa23.65■■□□□ 1.38
RAPGEF4-201ENST00000397081 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
RAPGEF4-201ENST00000397081 TTBK1Q5TCY1 1321 aaPredicted RBP23.29■■□□□ 1.32
RAPGEF4-201ENST00000397081 TRIM41Q8WV44 630 aa23.25■■□□□ 1.31
RAPGEF4-201ENST00000397081 SCRIBQ14160 1630 aa23.08■■□□□ 1.29
RAPGEF4-201ENST00000397081 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
RAPGEF4-201ENST00000397081 ZEB1P37275 1124 aaPredicted RBP22.95■■□□□ 1.26
RAPGEF4-201ENST00000397081 CCER1Q8TC90 406 aaPredicted RBP22.89■■□□□ 1.25
RAPGEF4-201ENST00000397081 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
RAPGEF4-201ENST00000397081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.82■■□□□ 1.24
RAPGEF4-201ENST00000397081 NACADO15069 1562 aa22.73■■□□□ 1.23
RAPGEF4-201ENST00000397081 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
RAPGEF4-201ENST00000397081 SCAF1Q9H7N4 1312 aaKnown RBP22.64■■□□□ 1.22
RAPGEF4-201ENST00000397081 YTHDC1Q96MU7 727 aaKnown RBP22.62■■□□□ 1.21
RAPGEF4-201ENST00000397081 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
RAPGEF4-201ENST00000397081 RANGAP1P46060 587 aaPredicted RBP22.51■■□□□ 1.19
RAPGEF4-201ENST00000397081 CENPBP07199 599 aaPredicted RBP22.45■■□□□ 1.18
RAPGEF4-201ENST00000397081 DIEXFQ68CQ4 756 aaKnown RBP22.4■■□□□ 1.18
RAPGEF4-201ENST00000397081 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
RAPGEF4-201ENST00000397081 CECR2Q9BXF3 1484 aa22.39■■□□□ 1.17
RAPGEF4-201ENST00000397081 GTF3C3Q9Y5Q9 886 aa22.38■■□□□ 1.17
RAPGEF4-201ENST00000397081 RSF1Q96T23 1441 aaPredicted RBP22.35■■□□□ 1.17
RAPGEF4-201ENST00000397081 NEUROD1Q13562 356 aa22.34■■□□□ 1.17
RAPGEF4-201ENST00000397081 ACIN1Q9UKV3 1341 aaKnown RBP22.28■■□□□ 1.16
RAPGEF4-201ENST00000397081 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
RAPGEF4-201ENST00000397081 MROH2BQ7Z745 1585 aa22.14■■□□□ 1.13
RAPGEF4-201ENST00000397081 APLP2Q06481 763 aa22.1■■□□□ 1.13
RAPGEF4-201ENST00000397081 WIZO95785 1651 aa21.95■■□□□ 1.1
RAPGEF4-201ENST00000397081 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
RAPGEF4-201ENST00000397081 ZNF316A6NFI3 1004 aaPredicted RBP21.9■■□□□ 1.1
RAPGEF4-201ENST00000397081 UNC13AQ9UPW8 1703 aa21.83■■□□□ 1.09
RAPGEF4-201ENST00000397081 ITGAEP38570 1179 aa21.79■■□□□ 1.08
RAPGEF4-201ENST00000397081 MIER1Q8N108 512 aa21.79■■□□□ 1.08
RAPGEF4-201ENST00000397081 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
RAPGEF4-201ENST00000397081 BICRAQ9NZM4 1560 aa21.75■■□□□ 1.07
RAPGEF4-201ENST00000397081 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
RAPGEF4-201ENST00000397081 CEP162Q5TB80 1403 aa21.63■■□□□ 1.05
RAPGEF4-201ENST00000397081 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
RAPGEF4-201ENST00000397081 BAZ1BQ9UIG0 1483 aaKnown RBP21.59■■□□□ 1.05
RAPGEF4-201ENST00000397081 SOGA1O94964 1423 aa21.57■■□□□ 1.04
RAPGEF4-201ENST00000397081 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
RAPGEF4-201ENST00000397081 TOP2AP11388 1531 aaKnown RBP21.53■■□□□ 1.04
RAPGEF4-201ENST00000397081 ABCC8Q09428 1581 aa21.53■■□□□ 1.04
RAPGEF4-201ENST00000397081 BCANQ96GW7 911 aa21.53■■□□□ 1.04
RAPGEF4-201ENST00000397081 MYT1Q01538 1121 aa21.52■■□□□ 1.04
RAPGEF4-201ENST00000397081 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
RAPGEF4-201ENST00000397081 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
RAPGEF4-201ENST00000397081 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
RAPGEF4-201ENST00000397081 TNIKQ9UKE5 1360 aa21.34■■□□□ 1.01
RAPGEF4-201ENST00000397081 EIF4G1Q04637 1599 aaKnown RBP21.32■■□□□ 1
RAPGEF4-201ENST00000397081 CLIP1P30622 1438 aa21.26■□□□□ 0.99
RAPGEF4-201ENST00000397081 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
RAPGEF4-201ENST00000397081 HIRIP3Q9BW71 556 aaPredicted RBP21.2■□□□□ 0.98
RAPGEF4-201ENST00000397081 GOLGA3Q08378 1498 aa21.19■□□□□ 0.98
RAPGEF4-201ENST00000397081 NEFLP07196 543 aa21.17■□□□□ 0.98
RAPGEF4-201ENST00000397081 FAM50AQ14320 339 aaKnown RBP21.16■□□□□ 0.98
RAPGEF4-201ENST00000397081 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
RAPGEF4-201ENST00000397081 SUPT16HQ9Y5B9 1047 aaKnown RBP21.12■□□□□ 0.97
RAPGEF4-201ENST00000397081 P3H3Q8IVL6 736 aa21.1■□□□□ 0.97
RAPGEF4-201ENST00000397081 FKBP8Q14318 412 aa21.09■□□□□ 0.97
RAPGEF4-201ENST00000397081 NCAPD3P42695 1498 aa21.08■□□□□ 0.97
RAPGEF4-201ENST00000397081 KCNH8Q96L42 1107 aa21.07■□□□□ 0.96
RAPGEF4-201ENST00000397081 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
RAPGEF4-201ENST00000397081 KANK4Q5T7N3 995 aaPredicted RBP21.05■□□□□ 0.96
RAPGEF4-201ENST00000397081 TRIM52Q96A61 297 aa21.05■□□□□ 0.96
RAPGEF4-201ENST00000397081 PEG3Q9GZU2 1588 aa21.04■□□□□ 0.96
RAPGEF4-201ENST00000397081 EEA1Q15075 1411 aa21.03■□□□□ 0.96
RAPGEF4-201ENST00000397081 CC2D2AQ9P2K1 1620 aa21■□□□□ 0.95
RAPGEF4-201ENST00000397081 DNAJC5BQ9UF47 199 aa20.99■□□□□ 0.95
RAPGEF4-201ENST00000397081 CEP164Q9UPV0 1460 aa20.96■□□□□ 0.95
RAPGEF4-201ENST00000397081 ERICH6Q7L0X2 663 aa20.94■□□□□ 0.94
RAPGEF4-201ENST00000397081 VPS8Q8N3P4 1428 aa20.92■□□□□ 0.94
RAPGEF4-201ENST00000397081 SIN3AQ96ST3 1273 aa20.92■□□□□ 0.94
RAPGEF4-201ENST00000397081 HMGXB3Q12766 1538 aa20.9■□□□□ 0.94
RAPGEF4-201ENST00000397081 RAPGEF2Q9Y4G8 1499 aa20.89■□□□□ 0.93
RAPGEF4-201ENST00000397081 CADPSQ9ULU8 1353 aa20.88■□□□□ 0.93
RAPGEF4-201ENST00000397081 IRX6P78412 446 aaPredicted RBP20.87■□□□□ 0.93
RAPGEF4-201ENST00000397081 TSHZ2Q9NRE2 1034 aa20.86■□□□□ 0.93
RAPGEF4-201ENST00000397081 SYNJ1O43426 1573 aa20.84■□□□□ 0.93
RAPGEF4-201ENST00000397081 ANP32CO43423 234 aa20.84■□□□□ 0.93
RAPGEF4-201ENST00000397081 DHX57Q6P158 1386 aaKnown RBP20.81■□□□□ 0.92
RAPGEF4-201ENST00000397081 NESP48681 1621 aa20.78■□□□□ 0.92
RAPGEF4-201ENST00000397081 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
RAPGEF4-201ENST00000397081 CFTRP13569 1480 aa20.75■□□□□ 0.91
RAPGEF4-201ENST00000397081 ANP32EQ9BTT0 268 aa20.75■□□□□ 0.91
RAPGEF4-201ENST00000397081 CLSPNQ9HAW4 1339 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms