RNA–Protein interactions for RNA: ENST00000409207.5

MCFD2-204, Transcript of multiple coagulation factor deficiency 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MCFD2, Length 1,113 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-204ENST00000409207 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.37
MCFD2-204ENST00000409207 CCDC180Q9P1Z9 1646 aa32.11■■■□□ 2.73
MCFD2-204ENST00000409207 ABCC9O60706 1549 aa31.18■■■□□ 2.58
MCFD2-204ENST00000409207 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
MCFD2-204ENST00000409207 NACADO15069 1562 aa30.09■■■□□ 2.41
MCFD2-204ENST00000409207 RB1CC1Q8TDY2 1594 aa30.09■■■□□ 2.41
MCFD2-204ENST00000409207 DCAF8L2P0C7V8 631 aa30.02■■■□□ 2.4
MCFD2-204ENST00000409207 MYO15BQ96JP2 1530 aa29.95■■■□□ 2.38
MCFD2-204ENST00000409207 DCAF1Q9Y4B6 1507 aa29.9■■■□□ 2.38
MCFD2-204ENST00000409207 UNC13AQ9UPW8 1703 aa29.54■■■□□ 2.32
MCFD2-204ENST00000409207 SCRIBQ14160 1630 aa29.3■■■□□ 2.28
MCFD2-204ENST00000409207 BICRAQ9NZM4 1560 aa29.2■■■□□ 2.26
MCFD2-204ENST00000409207 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.25
MCFD2-204ENST00000409207 SHROOM4Q9ULL8 1493 aa28.86■■■□□ 2.21
MCFD2-204ENST00000409207 DNAJC5BQ9UF47 199 aa28.41■■■□□ 2.14
MCFD2-204ENST00000409207 EIF4G1Q04637 1599 aaKnown RBP28.4■■■□□ 2.14
MCFD2-204ENST00000409207 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
MCFD2-204ENST00000409207 CECR2Q9BXF3 1484 aa28.12■■■□□ 2.09
MCFD2-204ENST00000409207 SMARCA4P51532 1647 aa28.04■■■□□ 2.08
MCFD2-204ENST00000409207 BAZ1AQ9NRL2 1556 aaPredicted RBP27.99■■■□□ 2.07
MCFD2-204ENST00000409207 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
MCFD2-204ENST00000409207 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
MCFD2-204ENST00000409207 SMARCA2P51531 1590 aa27.78■■■□□ 2.04
MCFD2-204ENST00000409207 PEG3Q9GZU2 1588 aa27.74■■■□□ 2.03
MCFD2-204ENST00000409207 NCAPD3P42695 1498 aa27.72■■■□□ 2.03
MCFD2-204ENST00000409207 HMGXB3Q12766 1538 aa27.66■■■□□ 2.02
MCFD2-204ENST00000409207 WIZO95785 1651 aa27.61■■■□□ 2.01
MCFD2-204ENST00000409207 BAZ1BQ9UIG0 1483 aaKnown RBP27.58■■■□□ 2.01
MCFD2-204ENST00000409207 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2
MCFD2-204ENST00000409207 TOP2AP11388 1531 aaKnown RBP27.3■■□□□ 1.96
MCFD2-204ENST00000409207 AEBP2Q6ZN18 517 aaPredicted RBP27.29■■□□□ 1.96
MCFD2-204ENST00000409207 NESP48681 1621 aa27.05■■□□□ 1.92
MCFD2-204ENST00000409207 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
MCFD2-204ENST00000409207 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
MCFD2-204ENST00000409207 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
MCFD2-204ENST00000409207 CADPSQ9ULU8 1353 aa26.92■■□□□ 1.9
MCFD2-204ENST00000409207 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
MCFD2-204ENST00000409207 CFTRP13569 1480 aa26.82■■□□□ 1.88
MCFD2-204ENST00000409207 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
MCFD2-204ENST00000409207 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
MCFD2-204ENST00000409207 PDS5BQ9NTI5 1447 aa26.76■■□□□ 1.87
MCFD2-204ENST00000409207 THOC2Q8NI27 1593 aaKnown RBP26.65■■□□□ 1.86
MCFD2-204ENST00000409207 FANCD2Q9BXW9 1451 aa26.64■■□□□ 1.86
MCFD2-204ENST00000409207 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
MCFD2-204ENST00000409207 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
MCFD2-204ENST00000409207 CUX2O14529 1486 aa26.5■■□□□ 1.83
MCFD2-204ENST00000409207 WDR62O43379 1518 aa26.46■■□□□ 1.83
MCFD2-204ENST00000409207 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
MCFD2-204ENST00000409207 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
MCFD2-204ENST00000409207 TOPBP1Q92547 1522 aa26.25■■□□□ 1.79
MCFD2-204ENST00000409207 ABCC8Q09428 1581 aa26.22■■□□□ 1.79
MCFD2-204ENST00000409207 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
MCFD2-204ENST00000409207 CUX1P39880 1505 aa26.14■■□□□ 1.77
MCFD2-204ENST00000409207 POLA1P09884 1462 aaPredicted RBP26.04■■□□□ 1.76
MCFD2-204ENST00000409207 IFT140Q96RY7 1462 aa26.02■■□□□ 1.76
MCFD2-204ENST00000409207 FGD5Q6ZNL6 1462 aa26■■□□□ 1.75
MCFD2-204ENST00000409207 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
MCFD2-204ENST00000409207 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
MCFD2-204ENST00000409207 TARBP1Q13395 1621 aaKnown RBP25.98■■□□□ 1.75
MCFD2-204ENST00000409207 SYNJ1O43426 1573 aa25.98■■□□□ 1.75
MCFD2-204ENST00000409207 TOP2BQ02880 1626 aa25.96■■□□□ 1.75
MCFD2-204ENST00000409207 RAD54L2Q9Y4B4 1467 aa25.91■■□□□ 1.74
MCFD2-204ENST00000409207 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
MCFD2-204ENST00000409207 SOGA1O94964 1423 aa25.88■■□□□ 1.73
MCFD2-204ENST00000409207 WDR97A6NE52 1622 aa25.87■■□□□ 1.73
MCFD2-204ENST00000409207 EIF4G3O43432 1585 aaKnown RBP25.86■■□□□ 1.73
MCFD2-204ENST00000409207 ABCA10Q8WWZ4 1543 aa25.75■■□□□ 1.71
MCFD2-204ENST00000409207 AQRO60306 1485 aaKnown RBP eCLIP25.75■■□□□ 1.712e-6■■■■□ 23.2
MCFD2-204ENST00000409207 TDRD9Q8NDG6 1382 aaKnown RBP25.72■■□□□ 1.71
MCFD2-204ENST00000409207 ABCA5Q8WWZ7 1642 aa25.69■■□□□ 1.7
MCFD2-204ENST00000409207 PBRM1Q86U86 1689 aa25.67■■□□□ 1.7
MCFD2-204ENST00000409207 GAPVD1Q14C86 1478 aa25.62■■□□□ 1.69
MCFD2-204ENST00000409207 GRIN2BQ13224 1484 aa25.59■■□□□ 1.69
MCFD2-204ENST00000409207 SNAPC4Q5SXM2 1469 aa25.55■■□□□ 1.68
MCFD2-204ENST00000409207 CHD1O14646 1710 aa25.54■■□□□ 1.68
MCFD2-204ENST00000409207 MAGI1Q96QZ7 1491 aaPredicted RBP25.52■■□□□ 1.68
MCFD2-204ENST00000409207 ERICH3Q5RHP9 1530 aa25.45■■□□□ 1.66
MCFD2-204ENST00000409207 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
MCFD2-204ENST00000409207 KIF27Q86VH2 1401 aa25.43■■□□□ 1.66
MCFD2-204ENST00000409207 ADAMTS12P58397 1594 aa25.43■■□□□ 1.66
MCFD2-204ENST00000409207 DNAJC5Q9H3Z4 198 aa25.42■■□□□ 1.66
MCFD2-204ENST00000409207 SYNJ2O15056 1496 aa25.4■■□□□ 1.66
MCFD2-204ENST00000409207 FBLN2P98095 1184 aa25.37■■□□□ 1.65
MCFD2-204ENST00000409207 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
MCFD2-204ENST00000409207 CHMP7Q8WUX9 453 aaPredicted RBP25.32■■□□□ 1.64
MCFD2-204ENST00000409207 FHAD1B1AJZ9 1412 aa25.31■■□□□ 1.64
MCFD2-204ENST00000409207 CUL7Q14999 1698 aa25.29■■□□□ 1.64
MCFD2-204ENST00000409207 RUSC2Q8N2Y8 1516 aa25.28■■□□□ 1.64
MCFD2-204ENST00000409207 IGF1RP08069 1367 aa25.28■■□□□ 1.64
MCFD2-204ENST00000409207 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
MCFD2-204ENST00000409207 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
MCFD2-204ENST00000409207 CEP170Q5SW79 1584 aa25.18■■□□□ 1.62
MCFD2-204ENST00000409207 NUP160Q12769 1436 aa25.16■■□□□ 1.62
MCFD2-204ENST00000409207 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
MCFD2-204ENST00000409207 RIMBP3CA6NJZ7 1639 aa25.06■■□□□ 1.6
MCFD2-204ENST00000409207 RIMBP3BA6NNM3 1639 aa25.06■■□□□ 1.6
MCFD2-204ENST00000409207 RIMBP3Q9UFD9 1639 aa25.06■■□□□ 1.6
MCFD2-204ENST00000409207 ARHGEF11O15085 1522 aa25.05■■□□□ 1.6
MCFD2-204ENST00000409207 EEA1Q15075 1411 aa25.04■■□□□ 1.6
MCFD2-204ENST00000409207 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms