RNA–Protein interactions for RNA: ENST00000229971.2

FBXL4-201, Transcript of F-box and leucine rich repeat protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXL4, Length 2,810 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXL4-201ENST00000229971 NISCHQ9Y2I1 1504 aa29.79■■■□□ 2.36
FBXL4-201ENST00000229971 SHROOM4Q9ULL8 1493 aa25.87■■□□□ 1.73
FBXL4-201ENST00000229971 DCAF8L2P0C7V8 631 aa25.5■■□□□ 1.67
FBXL4-201ENST00000229971 SUPT5HO00267 1087 aaKnown RBP25.45■■□□□ 1.67
FBXL4-201ENST00000229971 CCDC180Q9P1Z9 1646 aa25.16■■□□□ 1.62
FBXL4-201ENST00000229971 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
FBXL4-201ENST00000229971 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
FBXL4-201ENST00000229971 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
FBXL4-201ENST00000229971 PCGF6Q9BYE7 350 aa24.28■■□□□ 1.48
FBXL4-201ENST00000229971 HRCP23327 699 aa24.25■■□□□ 1.47
FBXL4-201ENST00000229971 ABCC9O60706 1549 aa24.16■■□□□ 1.46
FBXL4-201ENST00000229971 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
FBXL4-201ENST00000229971 LOC105371045A0A1W2PR82 267 aa24.14■■□□□ 1.46
FBXL4-201ENST00000229971 PPARGC1BQ86YN6 1023 aaKnown RBP24■■□□□ 1.43
FBXL4-201ENST00000229971 SCRIBQ14160 1630 aa24■■□□□ 1.43
FBXL4-201ENST00000229971 RSF1Q96T23 1441 aaPredicted RBP23.6■■□□□ 1.37
FBXL4-201ENST00000229971 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
FBXL4-201ENST00000229971 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
FBXL4-201ENST00000229971 TRIM26Q12899 539 aaPredicted RBP23.55■■□□□ 1.36
FBXL4-201ENST00000229971 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
FBXL4-201ENST00000229971 CECR2Q9BXF3 1484 aa23.5■■□□□ 1.35
FBXL4-201ENST00000229971 NACADO15069 1562 aa23.46■■□□□ 1.35
FBXL4-201ENST00000229971 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
FBXL4-201ENST00000229971 MROH2BQ7Z745 1585 aa23.28■■□□□ 1.32
FBXL4-201ENST00000229971 PABPN1Q86U42 306 aaKnown RBP eCLIP23.25■■□□□ 1.31
FBXL4-201ENST00000229971 WIZO95785 1651 aa23.13■■□□□ 1.29
FBXL4-201ENST00000229971 ZEB1P37275 1124 aaPredicted RBP22.98■■□□□ 1.27
FBXL4-201ENST00000229971 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
FBXL4-201ENST00000229971 BAZ1AQ9NRL2 1556 aaPredicted RBP22.85■■□□□ 1.25
FBXL4-201ENST00000229971 TTBK1Q5TCY1 1321 aaPredicted RBP22.84■■□□□ 1.25
FBXL4-201ENST00000229971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.8■■□□□ 1.24
FBXL4-201ENST00000229971 SMARCA4P51532 1647 aa22.72■■□□□ 1.23
FBXL4-201ENST00000229971 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
FBXL4-201ENST00000229971 CCDC88BA6NC98 1476 aa22.67■■□□□ 1.22
FBXL4-201ENST00000229971 CCER1Q8TC90 406 aaPredicted RBP22.66■■□□□ 1.22
FBXL4-201ENST00000229971 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
FBXL4-201ENST00000229971 EIF4G1Q04637 1599 aaKnown RBP22.63■■□□□ 1.21
FBXL4-201ENST00000229971 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
FBXL4-201ENST00000229971 TOP2AP11388 1531 aaKnown RBP22.58■■□□□ 1.21
FBXL4-201ENST00000229971 SOGA1O94964 1423 aa22.53■■□□□ 1.2
FBXL4-201ENST00000229971 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
FBXL4-201ENST00000229971 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
FBXL4-201ENST00000229971 CEP162Q5TB80 1403 aa22.45■■□□□ 1.18
FBXL4-201ENST00000229971 RUSC2Q8N2Y8 1516 aa22.44■■□□□ 1.18
FBXL4-201ENST00000229971 CSRNP3Q8WYN3 585 aa22.37■■□□□ 1.17
FBXL4-201ENST00000229971 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
FBXL4-201ENST00000229971 TNIKQ9UKE5 1360 aa22.3■■□□□ 1.16
FBXL4-201ENST00000229971 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
FBXL4-201ENST00000229971 DIEXFQ68CQ4 756 aaKnown RBP22.29■■□□□ 1.16
FBXL4-201ENST00000229971 NEUROD1Q13562 356 aa22.27■■□□□ 1.16
FBXL4-201ENST00000229971 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
FBXL4-201ENST00000229971 RANGAP1P46060 587 aaPredicted RBP22.24■■□□□ 1.15
FBXL4-201ENST00000229971 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
FBXL4-201ENST00000229971 HNRNPUL2Q1KMD3 747 aaKnown RBP22.16■■□□□ 1.14
FBXL4-201ENST00000229971 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
FBXL4-201ENST00000229971 EEA1Q15075 1411 aa22.13■■□□□ 1.13
FBXL4-201ENST00000229971 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
FBXL4-201ENST00000229971 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
FBXL4-201ENST00000229971 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
FBXL4-201ENST00000229971 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.12
FBXL4-201ENST00000229971 ZNF316A6NFI3 1004 aaPredicted RBP22■■□□□ 1.11
FBXL4-201ENST00000229971 YTHDC1Q96MU7 727 aaKnown RBP22■■□□□ 1.11
FBXL4-201ENST00000229971 CENPBP07199 599 aaPredicted RBP21.98■■□□□ 1.11
FBXL4-201ENST00000229971 CLIP1P30622 1438 aa21.98■■□□□ 1.11
FBXL4-201ENST00000229971 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
FBXL4-201ENST00000229971 RAPGEF2Q9Y4G8 1499 aa21.92■■□□□ 1.1
FBXL4-201ENST00000229971 APLP2Q06481 763 aa21.9■■□□□ 1.1
FBXL4-201ENST00000229971 KIF21BO75037 1637 aa21.85■■□□□ 1.09
FBXL4-201ENST00000229971 MIER1Q8N108 512 aa21.84■■□□□ 1.09
FBXL4-201ENST00000229971 VPS8Q8N3P4 1428 aa21.84■■□□□ 1.09
FBXL4-201ENST00000229971 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
FBXL4-201ENST00000229971 KANK4Q5T7N3 995 aaPredicted RBP21.68■■□□□ 1.06
FBXL4-201ENST00000229971 HMGXB3Q12766 1538 aa21.67■■□□□ 1.06
FBXL4-201ENST00000229971 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
FBXL4-201ENST00000229971 CUX1P39880 1505 aa21.65■■□□□ 1.06
FBXL4-201ENST00000229971 CFTRP13569 1480 aa21.61■■□□□ 1.05
FBXL4-201ENST00000229971 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.04
FBXL4-201ENST00000229971 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
FBXL4-201ENST00000229971 ITGAEP38570 1179 aa21.56■■□□□ 1.04
FBXL4-201ENST00000229971 PRXQ9BXM0 1461 aa21.53■■□□□ 1.04
FBXL4-201ENST00000229971 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
FBXL4-201ENST00000229971 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
FBXL4-201ENST00000229971 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
FBXL4-201ENST00000229971 BIVM-ERCC5R4GMW8 1640 aa21.49■■□□□ 1.03
FBXL4-201ENST00000229971 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
FBXL4-201ENST00000229971 CUX2O14529 1486 aa21.44■■□□□ 1.02
FBXL4-201ENST00000229971 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
FBXL4-201ENST00000229971 NESP48681 1621 aa21.44■■□□□ 1.02
FBXL4-201ENST00000229971 P3H3Q8IVL6 736 aa21.41■■□□□ 1.02
FBXL4-201ENST00000229971 ARHGAP35Q9NRY4 1499 aa21.36■■□□□ 1.01
FBXL4-201ENST00000229971 FGD5Q6ZNL6 1462 aa21.35■■□□□ 1.01
FBXL4-201ENST00000229971 IGF1RP08069 1367 aa21.35■■□□□ 1.01
FBXL4-201ENST00000229971 ATP1B4Q9UN42 357 aaPredicted RBP21.34■■□□□ 1.01
FBXL4-201ENST00000229971 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1
FBXL4-201ENST00000229971 CCNB3Q8WWL7 1395 aa21.32■■□□□ 1
FBXL4-201ENST00000229971 RRBP1Q9P2E9 1410 aaKnown RBP21.32■■□□□ 1
FBXL4-201ENST00000229971 FANCD2Q9BXW9 1451 aa21.32■■□□□ 1
FBXL4-201ENST00000229971 RAD54L2Q9Y4B4 1467 aa21.31■■□□□ 1
FBXL4-201ENST00000229971 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
FBXL4-201ENST00000229971 KCNH8Q96L42 1107 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms