RNA–Protein interactions for RNA: ENST00000373122.8

TREM2-203, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 1,012 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-203ENST00000373122 NISCHQ9Y2I1 1504 aa36.69■■■■□ 3.46
TREM2-203ENST00000373122 CCDC180Q9P1Z9 1646 aa32.69■■■□□ 2.82
TREM2-203ENST00000373122 ABCC9O60706 1549 aa32.48■■■□□ 2.79
TREM2-203ENST00000373122 RB1CC1Q8TDY2 1594 aa31.05■■■□□ 2.56
TREM2-203ENST00000373122 NACADO15069 1562 aa30.96■■■□□ 2.55
TREM2-203ENST00000373122 DCAF8L2P0C7V8 631 aa30.86■■■□□ 2.53
TREM2-203ENST00000373122 MYO15BQ96JP2 1530 aa30.7■■■□□ 2.51
TREM2-203ENST00000373122 ZCCHC6Q5VYS8 1495 aaKnown RBP30.44■■■□□ 2.46
TREM2-203ENST00000373122 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
TREM2-203ENST00000373122 PABPN1Q86U42 306 aaKnown RBP eCLIP30.35■■■□□ 2.45
TREM2-203ENST00000373122 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
TREM2-203ENST00000373122 UNC13AQ9UPW8 1703 aa30.15■■■□□ 2.42
TREM2-203ENST00000373122 BICRAQ9NZM4 1560 aa30.13■■■□□ 2.41
TREM2-203ENST00000373122 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
TREM2-203ENST00000373122 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
TREM2-203ENST00000373122 EIF4G1Q04637 1599 aaKnown RBP29.36■■■□□ 2.29
TREM2-203ENST00000373122 CC2D2AQ9P2K1 1620 aa29.33■■■□□ 2.29
TREM2-203ENST00000373122 CECR2Q9BXF3 1484 aa29.28■■■□□ 2.28
TREM2-203ENST00000373122 NCAPD3P42695 1498 aa28.65■■■□□ 2.18
TREM2-203ENST00000373122 ATAD2BQ9ULI0 1458 aa28.54■■■□□ 2.16
TREM2-203ENST00000373122 SMARCA4P51532 1647 aa28.47■■■□□ 2.15
TREM2-203ENST00000373122 SMARCA2P51531 1590 aa28.45■■■□□ 2.14
TREM2-203ENST00000373122 BAZ1AQ9NRL2 1556 aaPredicted RBP28.44■■■□□ 2.14
TREM2-203ENST00000373122 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
TREM2-203ENST00000373122 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
TREM2-203ENST00000373122 MROH2BQ7Z745 1585 aa28.24■■■□□ 2.11
TREM2-203ENST00000373122 BAZ1BQ9UIG0 1483 aaKnown RBP28.23■■■□□ 2.11
TREM2-203ENST00000373122 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
TREM2-203ENST00000373122 NESP48681 1621 aa27.97■■■□□ 2.07
TREM2-203ENST00000373122 CUX2O14529 1486 aa27.95■■■□□ 2.06
TREM2-203ENST00000373122 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
TREM2-203ENST00000373122 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
TREM2-203ENST00000373122 WIZO95785 1651 aa27.82■■■□□ 2.04
TREM2-203ENST00000373122 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
TREM2-203ENST00000373122 PDS5BQ9NTI5 1447 aa27.76■■■□□ 2.04
TREM2-203ENST00000373122 DNAJC5Q9H3Z4 198 aa27.73■■■□□ 2.03
TREM2-203ENST00000373122 THOC2Q8NI27 1593 aaKnown RBP27.58■■■□□ 2.01
TREM2-203ENST00000373122 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
TREM2-203ENST00000373122 CFTRP13569 1480 aa27.51■■□□□ 1.99
TREM2-203ENST00000373122 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
TREM2-203ENST00000373122 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
TREM2-203ENST00000373122 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
TREM2-203ENST00000373122 CEP164Q9UPV0 1460 aa27.37■■□□□ 1.97
TREM2-203ENST00000373122 WDR62O43379 1518 aa27.35■■□□□ 1.97
TREM2-203ENST00000373122 CCDC88BA6NC98 1476 aa27.31■■□□□ 1.96
TREM2-203ENST00000373122 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
TREM2-203ENST00000373122 PRDM2Q13029 1718 aa26.98■■□□□ 1.91
TREM2-203ENST00000373122 ABCC8Q09428 1581 aa26.93■■□□□ 1.9
TREM2-203ENST00000373122 TOPBP1Q92547 1522 aa26.89■■□□□ 1.89
TREM2-203ENST00000373122 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
TREM2-203ENST00000373122 OSCARQ8IYS5 282 aa26.81■■□□□ 1.88
TREM2-203ENST00000373122 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
TREM2-203ENST00000373122 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
TREM2-203ENST00000373122 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
TREM2-203ENST00000373122 POLA1P09884 1462 aaPredicted RBP26.64■■□□□ 1.86
TREM2-203ENST00000373122 TARBP1Q13395 1621 aaKnown RBP26.6■■□□□ 1.85
TREM2-203ENST00000373122 SOGA1O94964 1423 aa26.57■■□□□ 1.84
TREM2-203ENST00000373122 AQRO60306 1485 aaKnown RBP eCLIP26.57■■□□□ 1.84
TREM2-203ENST00000373122 EIF4G3O43432 1585 aaKnown RBP26.52■■□□□ 1.84
TREM2-203ENST00000373122 RAD54L2Q9Y4B4 1467 aa26.52■■□□□ 1.84
TREM2-203ENST00000373122 CUX1P39880 1505 aa26.5■■□□□ 1.83
TREM2-203ENST00000373122 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
TREM2-203ENST00000373122 FGD5Q6ZNL6 1462 aa26.49■■□□□ 1.83
TREM2-203ENST00000373122 TDRD9Q8NDG6 1382 aaKnown RBP26.47■■□□□ 1.83
TREM2-203ENST00000373122 WDR97A6NE52 1622 aa26.38■■□□□ 1.81
TREM2-203ENST00000373122 FBLN2P98095 1184 aa26.35■■□□□ 1.81
TREM2-203ENST00000373122 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
TREM2-203ENST00000373122 MAGI1Q96QZ7 1491 aaPredicted RBP26.26■■□□□ 1.79
TREM2-203ENST00000373122 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
TREM2-203ENST00000373122 ABCA10Q8WWZ4 1543 aa26.25■■□□□ 1.79
TREM2-203ENST00000373122 SNAPC4Q5SXM2 1469 aa26.25■■□□□ 1.79
TREM2-203ENST00000373122 ARHGEF11O15085 1522 aa26.24■■□□□ 1.79
TREM2-203ENST00000373122 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
TREM2-203ENST00000373122 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
TREM2-203ENST00000373122 RIMBP3CA6NJZ7 1639 aa26.22■■□□□ 1.79
TREM2-203ENST00000373122 RIMBP3BA6NNM3 1639 aa26.22■■□□□ 1.79
TREM2-203ENST00000373122 RIMBP3Q9UFD9 1639 aa26.22■■□□□ 1.79
TREM2-203ENST00000373122 CHD1O14646 1710 aa26.19■■□□□ 1.78
TREM2-203ENST00000373122 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
TREM2-203ENST00000373122 TOP2BQ02880 1626 aa26.14■■□□□ 1.78
TREM2-203ENST00000373122 CYB5RLQ6IPT4 315 aa26.12■■□□□ 1.77
TREM2-203ENST00000373122 ABCA5Q8WWZ7 1642 aa26.1■■□□□ 1.77
TREM2-203ENST00000373122 BIVM-ERCC5R4GMW8 1640 aa26.1■■□□□ 1.77
TREM2-203ENST00000373122 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
TREM2-203ENST00000373122 CLASP1Q7Z460 1538 aa26.05■■□□□ 1.76
TREM2-203ENST00000373122 ARAP1Q96P48 1450 aa26■■□□□ 1.75
TREM2-203ENST00000373122 PBRM1Q86U86 1689 aa25.99■■□□□ 1.75
TREM2-203ENST00000373122 FHAD1B1AJZ9 1412 aa25.93■■□□□ 1.74
TREM2-203ENST00000373122 GRIN2AQ12879 1464 aa25.92■■□□□ 1.74
TREM2-203ENST00000373122 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
TREM2-203ENST00000373122 NUP160Q12769 1436 aa25.87■■□□□ 1.73
TREM2-203ENST00000373122 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
TREM2-203ENST00000373122 CEP170Q5SW79 1584 aa25.75■■□□□ 1.71
TREM2-203ENST00000373122 IGF1RP08069 1367 aa25.74■■□□□ 1.71
TREM2-203ENST00000373122 KIF27Q86VH2 1401 aa25.72■■□□□ 1.71
TREM2-203ENST00000373122 TRHP20396 242 aaPredicted RBP25.69■■□□□ 1.7
TREM2-203ENST00000373122 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
TREM2-203ENST00000373122 SHROOM2Q13796 1616 aa25.64■■□□□ 1.7
TREM2-203ENST00000373122 ERCC6L2Q5T890 1561 aa25.62■■□□□ 1.69
TREM2-203ENST00000373122 PRG4Q92954 1404 aaPredicted RBP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms