Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 AC023274.1-201ENST00000418278 595 ntBASIC11.1□□□□□ -0.63
SMIM17P0DL12 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ALG1L8P-201ENST00000533887 760 ntBASIC11.1□□□□□ -0.63
SMIM17P0DL12 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SMIM17P0DL12 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SMIM17P0DL12 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
SMIM17P0DL12 KRT8P12-202ENST00000472924 1397 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms