RNA–Protein interactions for RNA: ENST00000620364.4

COL19A1-205, Transcript of collagen type XIX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL19A1, Length 6,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL19A1-205ENST00000620364 DCAF8L2P0C7V8 631 aa21.85■■□□□ 1.09
COL19A1-205ENST00000620364 SUPT5HO00267 1087 aaKnown RBP20.34■□□□□ 0.85
COL19A1-205ENST00000620364 NISCHQ9Y2I1 1504 aa20.24■□□□□ 0.83
COL19A1-205ENST00000620364 SHROOM4Q9ULL8 1493 aa20.06■□□□□ 0.8
COL19A1-205ENST00000620364 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
COL19A1-205ENST00000620364 APLP2Q06481 763 aa19.63■□□□□ 0.73
COL19A1-205ENST00000620364 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
COL19A1-205ENST00000620364 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
COL19A1-205ENST00000620364 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
COL19A1-205ENST00000620364 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
COL19A1-205ENST00000620364 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
COL19A1-205ENST00000620364 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
COL19A1-205ENST00000620364 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
COL19A1-205ENST00000620364 UBTFP17480 764 aaKnown RBP18.78■□□□□ 0.6
COL19A1-205ENST00000620364 CCER1Q8TC90 406 aaPredicted RBP18.63■□□□□ 0.57
COL19A1-205ENST00000620364 MYT1LQ9UL68 1186 aa18.58■□□□□ 0.57
COL19A1-205ENST00000620364 ERICH6Q7L0X2 663 aa18.56■□□□□ 0.56
COL19A1-205ENST00000620364 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
COL19A1-205ENST00000620364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.47■□□□□ 0.55
COL19A1-205ENST00000620364 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
COL19A1-205ENST00000620364 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
COL19A1-205ENST00000620364 NEFLP07196 543 aa18.29■□□□□ 0.52
COL19A1-205ENST00000620364 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
COL19A1-205ENST00000620364 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
COL19A1-205ENST00000620364 ITGAEP38570 1179 aa18.22■□□□□ 0.51
COL19A1-205ENST00000620364 YTHDC1Q96MU7 727 aaKnown RBP18.2■□□□□ 0.5
COL19A1-205ENST00000620364 POLR3GLQ9BT43 218 aa18.2■□□□□ 0.5
COL19A1-205ENST00000620364 SLC4A1APQ9BWU0 796 aaKnown RBP18.04■□□□□ 0.48
COL19A1-205ENST00000620364 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
COL19A1-205ENST00000620364 PABPN1Q86U42 306 aaKnown RBP eCLIP17.94■□□□□ 0.46
COL19A1-205ENST00000620364 ABCC9O60706 1549 aa17.94■□□□□ 0.46
COL19A1-205ENST00000620364 TRIM26Q12899 539 aaPredicted RBP17.92■□□□□ 0.46
COL19A1-205ENST00000620364 DAXXQ9UER7 740 aaPredicted RBP17.89■□□□□ 0.45
COL19A1-205ENST00000620364 FAM50AQ14320 339 aaKnown RBP17.78■□□□□ 0.44
COL19A1-205ENST00000620364 FBLN2P98095 1184 aa17.77■□□□□ 0.44
COL19A1-205ENST00000620364 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
COL19A1-205ENST00000620364 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
COL19A1-205ENST00000620364 BCANQ96GW7 911 aa17.57■□□□□ 0.4
COL19A1-205ENST00000620364 CLSPNQ9HAW4 1339 aa17.56■□□□□ 0.4
COL19A1-205ENST00000620364 HRCP23327 699 aa17.55■□□□□ 0.4
COL19A1-205ENST00000620364 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
COL19A1-205ENST00000620364 ZNF326Q5BKZ1 582 aaKnown RBP17.52■□□□□ 0.4
COL19A1-205ENST00000620364 ZNF316A6NFI3 1004 aaPredicted RBP17.47■□□□□ 0.39
COL19A1-205ENST00000620364 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
COL19A1-205ENST00000620364 ARID3CA6NKF2 412 aa17.44■□□□□ 0.38
COL19A1-205ENST00000620364 MYT1Q01538 1121 aa17.42■□□□□ 0.38
COL19A1-205ENST00000620364 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
COL19A1-205ENST00000620364 P3H3Q8IVL6 736 aa17.37■□□□□ 0.37
COL19A1-205ENST00000620364 ESF1Q9H501 851 aaKnown RBP17.36■□□□□ 0.37
COL19A1-205ENST00000620364 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
COL19A1-205ENST00000620364 NEFMP07197 916 aa17.3■□□□□ 0.36
COL19A1-205ENST00000620364 PLPPR3Q6T4P5 718 aa17.3■□□□□ 0.36
COL19A1-205ENST00000620364 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
COL19A1-205ENST00000620364 CANXP27824 592 aaKnown RBP17.25■□□□□ 0.35
COL19A1-205ENST00000620364 ANP32CO43423 234 aa17.25■□□□□ 0.35
COL19A1-205ENST00000620364 BCL11AQ9H165 835 aa17.24■□□□□ 0.35
COL19A1-205ENST00000620364 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
COL19A1-205ENST00000620364 STAG3Q9UJ98 1225 aa17.22■□□□□ 0.35
COL19A1-205ENST00000620364 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
COL19A1-205ENST00000620364 CDK11AQ9UQ88 783 aaPredicted RBP17.22■□□□□ 0.35
COL19A1-205ENST00000620364 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
COL19A1-205ENST00000620364 SCRIBQ14160 1630 aa17.13■□□□□ 0.33
COL19A1-205ENST00000620364 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
COL19A1-205ENST00000620364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.3
COL19A1-205ENST00000620364 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
COL19A1-205ENST00000620364 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
COL19A1-205ENST00000620364 TONSLQ96HA7 1378 aa16.87■□□□□ 0.29
COL19A1-205ENST00000620364 CHIC2Q9UKJ5 165 aa16.84■□□□□ 0.29
COL19A1-205ENST00000620364 A0A0G2JS52 829 aa16.81■□□□□ 0.28
COL19A1-205ENST00000620364 TSPY4P0CV99 314 aa16.78■□□□□ 0.28
COL19A1-205ENST00000620364 TSPY10P0CW01 314 aa16.78■□□□□ 0.28
COL19A1-205ENST00000620364 ZBTB7CA1YPR0 619 aa16.77■□□□□ 0.28
COL19A1-205ENST00000620364 GTF3C3Q9Y5Q9 886 aa16.74■□□□□ 0.27
COL19A1-205ENST00000620364 PPP1R15AO75807 674 aaPredicted RBP16.73■□□□□ 0.27
COL19A1-205ENST00000620364 KDM2AQ9Y2K7 1162 aa16.72■□□□□ 0.27
COL19A1-205ENST00000620364 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
COL19A1-205ENST00000620364 KCNH8Q96L42 1107 aa16.72■□□□□ 0.27
COL19A1-205ENST00000620364 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
COL19A1-205ENST00000620364 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
COL19A1-205ENST00000620364 ANP32AP39687 249 aaKnown RBP16.71■□□□□ 0.27
COL19A1-205ENST00000620364 C14orf37Q86TY3 774 aa16.71■□□□□ 0.27
COL19A1-205ENST00000620364 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
COL19A1-205ENST00000620364 ARID4BQ4LE39 1312 aaPredicted RBP16.7■□□□□ 0.26
COL19A1-205ENST00000620364 RB1CC1Q8TDY2 1594 aa16.7■□□□□ 0.26
COL19A1-205ENST00000620364 HSP90AA1P07900 732 aaKnown RBP16.69■□□□□ 0.26
COL19A1-205ENST00000620364 WDR43Q15061 677 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL19A1-205ENST00000620364 SALL2Q9Y467 1007 aaPredicted RBP16.67■□□□□ 0.26
COL19A1-205ENST00000620364 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
COL19A1-205ENST00000620364 ZCCHC6Q5VYS8 1495 aaKnown RBP16.67■□□□□ 0.26
COL19A1-205ENST00000620364 UPF2Q9HAU5 1272 aaKnown RBP16.63■□□□□ 0.25
COL19A1-205ENST00000620364 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
COL19A1-205ENST00000620364 HAP1P54257 671 aaPredicted RBP16.63■□□□□ 0.25
COL19A1-205ENST00000620364 TMC1Q8TDI8 760 aa16.61■□□□□ 0.25
COL19A1-205ENST00000620364 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.25
COL19A1-205ENST00000620364 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
COL19A1-205ENST00000620364 PLEKHD1A6NEE1 506 aa16.59■□□□□ 0.25
COL19A1-205ENST00000620364 DDX10Q13206 875 aaKnown RBP16.58■□□□□ 0.24
COL19A1-205ENST00000620364 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.58■□□□□ 0.24
COL19A1-205ENST00000620364 ANP32BQ92688 251 aaKnown RBP16.57■□□□□ 0.24
COL19A1-205ENST00000620364 RRP7BPQ9NSQ0 103 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms