RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
TNFRSF11A-201ENST00000269485 DCAF8L2P0C7V8 631 aa26.21■■□□□ 1.79
TNFRSF11A-201ENST00000269485 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
TNFRSF11A-201ENST00000269485 SUPT5HO00267 1087 aaKnown RBP25.23■■□□□ 1.63
TNFRSF11A-201ENST00000269485 EHMT2Q96KQ7 1210 aa24.36■■□□□ 1.49
TNFRSF11A-201ENST00000269485 ABCC9O60706 1549 aa23.93■■□□□ 1.42
TNFRSF11A-201ENST00000269485 ZCCHC6Q5VYS8 1495 aaKnown RBP23.81■■□□□ 1.4
TNFRSF11A-201ENST00000269485 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
TNFRSF11A-201ENST00000269485 FAM9AQ8IZU1 332 aaPredicted RBP23.72■■□□□ 1.39
TNFRSF11A-201ENST00000269485 LOC105371045A0A1W2PR82 267 aa23.3■■□□□ 1.32
TNFRSF11A-201ENST00000269485 TTBK1Q5TCY1 1321 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF11A-201ENST00000269485 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
TNFRSF11A-201ENST00000269485 SCRIBQ14160 1630 aa23.27■■□□□ 1.32
TNFRSF11A-201ENST00000269485 CHIC1Q5VXU3 224 aa23.22■■□□□ 1.31
TNFRSF11A-201ENST00000269485 PPARGC1BQ86YN6 1023 aaKnown RBP23.14■■□□□ 1.29
TNFRSF11A-201ENST00000269485 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
TNFRSF11A-201ENST00000269485 RANGAP1P46060 587 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF11A-201ENST00000269485 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
TNFRSF11A-201ENST00000269485 MYO15BQ96JP2 1530 aa22.74■■□□□ 1.23
TNFRSF11A-201ENST00000269485 CECR2Q9BXF3 1484 aa22.71■■□□□ 1.23
TNFRSF11A-201ENST00000269485 HRCP23327 699 aa22.68■■□□□ 1.22
TNFRSF11A-201ENST00000269485 DCAF1Q9Y4B6 1507 aa22.68■■□□□ 1.22
TNFRSF11A-201ENST00000269485 PELP1Q8IZL8 1130 aaKnown RBP22.64■■□□□ 1.21
TNFRSF11A-201ENST00000269485 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
TNFRSF11A-201ENST00000269485 NACADO15069 1562 aa22.44■■□□□ 1.18
TNFRSF11A-201ENST00000269485 RB1CC1Q8TDY2 1594 aa22.39■■□□□ 1.17
TNFRSF11A-201ENST00000269485 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
TNFRSF11A-201ENST00000269485 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
TNFRSF11A-201ENST00000269485 WIZO95785 1651 aa22.18■■□□□ 1.14
TNFRSF11A-201ENST00000269485 ATP1B4Q9UN42 357 aaPredicted RBP22.02■■□□□ 1.11
TNFRSF11A-201ENST00000269485 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.11
TNFRSF11A-201ENST00000269485 MYT1Q01538 1121 aa21.93■■□□□ 1.1
TNFRSF11A-201ENST00000269485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.89■■□□□ 1.09
TNFRSF11A-201ENST00000269485 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF11A-201ENST00000269485 ABCC8Q09428 1581 aa21.85■■□□□ 1.09
TNFRSF11A-201ENST00000269485 CCDC88BA6NC98 1476 aa21.81■■□□□ 1.08
TNFRSF11A-201ENST00000269485 TRIM26Q12899 539 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF11A-201ENST00000269485 CCER1Q8TC90 406 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF11A-201ENST00000269485 ITGAEP38570 1179 aa21.79■■□□□ 1.08
TNFRSF11A-201ENST00000269485 HNRNPUL2Q1KMD3 747 aaKnown RBP21.79■■□□□ 1.08
TNFRSF11A-201ENST00000269485 APLP2Q06481 763 aa21.74■■□□□ 1.07
TNFRSF11A-201ENST00000269485 SMARCA4P51532 1647 aa21.7■■□□□ 1.06
TNFRSF11A-201ENST00000269485 UNC13AQ9UPW8 1703 aa21.67■■□□□ 1.06
TNFRSF11A-201ENST00000269485 SOGA1O94964 1423 aa21.66■■□□□ 1.06
TNFRSF11A-201ENST00000269485 CSRNP3Q8WYN3 585 aa21.64■■□□□ 1.06
TNFRSF11A-201ENST00000269485 BAZ1BQ9UIG0 1483 aaKnown RBP21.63■■□□□ 1.05
TNFRSF11A-201ENST00000269485 BICRAQ9NZM4 1560 aa21.63■■□□□ 1.05
TNFRSF11A-201ENST00000269485 P3H3Q8IVL6 736 aa21.6■■□□□ 1.05
TNFRSF11A-201ENST00000269485 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
TNFRSF11A-201ENST00000269485 TOP2AP11388 1531 aaKnown RBP21.52■■□□□ 1.03
TNFRSF11A-201ENST00000269485 ARID3CA6NKF2 412 aa21.51■■□□□ 1.03
TNFRSF11A-201ENST00000269485 ATAD2BQ9ULI0 1458 aa21.5■■□□□ 1.03
TNFRSF11A-201ENST00000269485 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
TNFRSF11A-201ENST00000269485 SMARCA2P51531 1590 aa21.45■■□□□ 1.03
TNFRSF11A-201ENST00000269485 DNAJC5BQ9UF47 199 aa21.45■■□□□ 1.02
TNFRSF11A-201ENST00000269485 GTF3C3Q9Y5Q9 886 aa21.43■■□□□ 1.02
TNFRSF11A-201ENST00000269485 NEUROD1Q13562 356 aa21.33■■□□□ 1.01
TNFRSF11A-201ENST00000269485 YTHDC1Q96MU7 727 aaKnown RBP21.33■■□□□ 1.01
TNFRSF11A-201ENST00000269485 CEP162Q5TB80 1403 aa21.23■□□□□ 0.99
TNFRSF11A-201ENST00000269485 EIF4G1Q04637 1599 aaKnown RBP21.21■□□□□ 0.99
TNFRSF11A-201ENST00000269485 ACIN1Q9UKV3 1341 aaKnown RBP21.19■□□□□ 0.98
TNFRSF11A-201ENST00000269485 FBLN2P98095 1184 aa21.16■□□□□ 0.98
TNFRSF11A-201ENST00000269485 CENPBP07199 599 aaPredicted RBP21.1■□□□□ 0.97
TNFRSF11A-201ENST00000269485 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
TNFRSF11A-201ENST00000269485 ZEB1P37275 1124 aaPredicted RBP21.07■□□□□ 0.96
TNFRSF11A-201ENST00000269485 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
TNFRSF11A-201ENST00000269485 CNGB1Q14028 1251 aaPredicted RBP21.06■□□□□ 0.96
TNFRSF11A-201ENST00000269485 CLIP1P30622 1438 aa21.03■□□□□ 0.96
TNFRSF11A-201ENST00000269485 RAPGEF2Q9Y4G8 1499 aa21.01■□□□□ 0.95
TNFRSF11A-201ENST00000269485 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
TNFRSF11A-201ENST00000269485 NESP48681 1621 aa20.99■□□□□ 0.95
TNFRSF11A-201ENST00000269485 TNIKQ9UKE5 1360 aa20.98■□□□□ 0.95
TNFRSF11A-201ENST00000269485 NCAPD3P42695 1498 aa20.95■□□□□ 0.94
TNFRSF11A-201ENST00000269485 CUX2O14529 1486 aa20.92■□□□□ 0.94
TNFRSF11A-201ENST00000269485 CADPSQ9ULU8 1353 aa20.91■□□□□ 0.94
TNFRSF11A-201ENST00000269485 CC2D2AQ9P2K1 1620 aa20.9■□□□□ 0.94
TNFRSF11A-201ENST00000269485 KANK4Q5T7N3 995 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF11A-201ENST00000269485 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
TNFRSF11A-201ENST00000269485 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
TNFRSF11A-201ENST00000269485 BCL11AQ9H165 835 aa20.85■□□□□ 0.93
TNFRSF11A-201ENST00000269485 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
TNFRSF11A-201ENST00000269485 EEA1Q15075 1411 aa20.83■□□□□ 0.93
TNFRSF11A-201ENST00000269485 HIRIP3Q9BW71 556 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF11A-201ENST00000269485 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
TNFRSF11A-201ENST00000269485 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
TNFRSF11A-201ENST00000269485 PEG3Q9GZU2 1588 aa20.78■□□□□ 0.92
TNFRSF11A-201ENST00000269485 CUX1P39880 1505 aa20.76■□□□□ 0.91
TNFRSF11A-201ENST00000269485 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
TNFRSF11A-201ENST00000269485 CFTRP13569 1480 aa20.73■□□□□ 0.91
TNFRSF11A-201ENST00000269485 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
TNFRSF11A-201ENST00000269485 CHIC2Q9UKJ5 165 aa20.71■□□□□ 0.91
TNFRSF11A-201ENST00000269485 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
TNFRSF11A-201ENST00000269485 POLR3GLQ9BT43 218 aa20.65■□□□□ 0.9
TNFRSF11A-201ENST00000269485 HMGXB3Q12766 1538 aa20.64■□□□□ 0.89
TNFRSF11A-201ENST00000269485 IGF1RP08069 1367 aa20.63■□□□□ 0.89
TNFRSF11A-201ENST00000269485 ZNF777Q9ULD5 760 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF11A-201ENST00000269485 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
TNFRSF11A-201ENST00000269485 TOP2BQ02880 1626 aa20.57■□□□□ 0.88
TNFRSF11A-201ENST00000269485 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
TNFRSF11A-201ENST00000269485 FHOD3Q2V2M9 1422 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms