RNA–Protein interactions for RNA: ENST00000413833.1

LINC00421-201, long intergenic non-protein coding RNA 421, humanhuman

TSL 1 (best) BASIC

Gene LINC00421, Length 1,054 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00421-201ENST00000413833 NISCHQ9Y2I1 1504 aa45.97■■■■■ 4.95
LINC00421-201ENST00000413833 ABCC9O60706 1549 aa41.74■■■■■ 4.27
LINC00421-201ENST00000413833 CCDC180Q9P1Z9 1646 aa41.46■■■■■ 4.23
LINC00421-201ENST00000413833 DNAJC5BQ9UF47 199 aa39.6■■■■□ 3.93
LINC00421-201ENST00000413833 RB1CC1Q8TDY2 1594 aa39.59■■■■□ 3.93
LINC00421-201ENST00000413833 NACADO15069 1562 aa39.24■■■■□ 3.87
LINC00421-201ENST00000413833 UNC13AQ9UPW8 1703 aa38.85■■■■□ 3.81
LINC00421-201ENST00000413833 PABPN1Q86U42 306 aaKnown RBP eCLIP38.76■■■■□ 3.8
LINC00421-201ENST00000413833 DCAF8L2P0C7V8 631 aa38.73■■■■□ 3.79
LINC00421-201ENST00000413833 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.77
LINC00421-201ENST00000413833 BICRAQ9NZM4 1560 aa38.57■■■■□ 3.77
LINC00421-201ENST00000413833 ZCCHC6Q5VYS8 1495 aaKnown RBP38.03■■■■□ 3.68
LINC00421-201ENST00000413833 DCAF1Q9Y4B6 1507 aa37.98■■■■□ 3.67
LINC00421-201ENST00000413833 SHROOM4Q9ULL8 1493 aa37.92■■■■□ 3.66
LINC00421-201ENST00000413833 CC2D2AQ9P2K1 1620 aa37.76■■■■□ 3.63
LINC00421-201ENST00000413833 SCRIBQ14160 1630 aa37.68■■■■□ 3.62
LINC00421-201ENST00000413833 CECR2Q9BXF3 1484 aa37.64■■■■□ 3.62
LINC00421-201ENST00000413833 EIF4G1Q04637 1599 aaKnown RBP37.58■■■■□ 3.61
LINC00421-201ENST00000413833 DNAJC5Q9H3Z4 198 aa36.59■■■■□ 3.45
LINC00421-201ENST00000413833 NCAPD3P42695 1498 aa36.24■■■■□ 3.39
LINC00421-201ENST00000413833 CUX2O14529 1486 aa36.17■■■■□ 3.38
LINC00421-201ENST00000413833 ATAD2BQ9ULI0 1458 aa36.07■■■■□ 3.37
LINC00421-201ENST00000413833 ERCC6Q03468 1493 aa35.99■■■■□ 3.35
LINC00421-201ENST00000413833 SMARCA4P51532 1647 aa35.96■■■■□ 3.35
LINC00421-201ENST00000413833 HMGXB3Q12766 1538 aa35.95■■■■□ 3.35
LINC00421-201ENST00000413833 SMARCA2P51531 1590 aa35.92■■■■□ 3.34
LINC00421-201ENST00000413833 NESP48681 1621 aa35.8■■■■□ 3.32
LINC00421-201ENST00000413833 BAZ1AQ9NRL2 1556 aaPredicted RBP35.68■■■■□ 3.3
LINC00421-201ENST00000413833 PEG3Q9GZU2 1588 aa35.66■■■■□ 3.3
LINC00421-201ENST00000413833 BAZ1BQ9UIG0 1483 aaKnown RBP35.64■■■■□ 3.3
LINC00421-201ENST00000413833 THOC2Q8NI27 1593 aaKnown RBP35.57■■■■□ 3.28
LINC00421-201ENST00000413833 LAMC3Q9Y6N6 1575 aa35.49■■■■□ 3.27
LINC00421-201ENST00000413833 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
LINC00421-201ENST00000413833 KIF21AQ7Z4S6 1674 aa35.37■■■■□ 3.25
LINC00421-201ENST00000413833 PDS5BQ9NTI5 1447 aa35.22■■■■□ 3.23
LINC00421-201ENST00000413833 CADPSQ9ULU8 1353 aa35.08■■■■□ 3.21
LINC00421-201ENST00000413833 WIZO95785 1651 aa34.99■■■■□ 3.19
LINC00421-201ENST00000413833 MRC2Q9UBG0 1479 aa34.97■■■■□ 3.19
LINC00421-201ENST00000413833 WDR62O43379 1518 aa34.96■■■■□ 3.19
LINC00421-201ENST00000413833 CEP164Q9UPV0 1460 aa34.74■■■■□ 3.15
LINC00421-201ENST00000413833 TRIM41Q8WV44 630 aa34.69■■■■□ 3.14
LINC00421-201ENST00000413833 FANCD2Q9BXW9 1451 aa34.68■■■■□ 3.14
LINC00421-201ENST00000413833 CFTRP13569 1480 aa34.64■■■■□ 3.14
LINC00421-201ENST00000413833 RSF1Q96T23 1441 aaPredicted RBP34.52■■■■□ 3.12
LINC00421-201ENST00000413833 TOP2AP11388 1531 aaKnown RBP34.49■■■■□ 3.11
LINC00421-201ENST00000413833 URB2Q14146 1524 aaKnown RBP34.48■■■■□ 3.11
LINC00421-201ENST00000413833 OSCARQ8IYS5 282 aa34.36■■■■□ 3.09
LINC00421-201ENST00000413833 PRDM2Q13029 1718 aa34.33■■■■□ 3.09
LINC00421-201ENST00000413833 ZNF608Q9ULD9 1512 aaPredicted RBP34.1■■■■□ 3.05
LINC00421-201ENST00000413833 CCDC88BA6NC98 1476 aa34.1■■■■□ 3.05
LINC00421-201ENST00000413833 RIMBP3CA6NJZ7 1639 aa34.08■■■■□ 3.05
LINC00421-201ENST00000413833 RIMBP3BA6NNM3 1639 aa34.08■■■■□ 3.05
LINC00421-201ENST00000413833 RIMBP3Q9UFD9 1639 aa34.08■■■■□ 3.05
LINC00421-201ENST00000413833 IFT140Q96RY7 1462 aa34.07■■■■□ 3.04
LINC00421-201ENST00000413833 TOPBP1Q92547 1522 aa34.01■■■■□ 3.04
LINC00421-201ENST00000413833 ARHGEF11O15085 1522 aa33.91■■■■□ 3.02
LINC00421-201ENST00000413833 EIF4G3O43432 1585 aaKnown RBP33.89■■■■□ 3.02
LINC00421-201ENST00000413833 ABCC8Q09428 1581 aa33.85■■■■□ 3.01
LINC00421-201ENST00000413833 DNMBPQ6XZF7 1577 aa33.85■■■■□ 3.01
LINC00421-201ENST00000413833 TARBP1Q13395 1621 aaKnown RBP33.8■■■■□ 3
LINC00421-201ENST00000413833 CHD1O14646 1710 aa33.75■■■□□ 2.99
LINC00421-201ENST00000413833 AQRO60306 1485 aaKnown RBP eCLIP33.7■■■□□ 2.99
LINC00421-201ENST00000413833 POLA1P09884 1462 aaPredicted RBP33.64■■■□□ 2.98
LINC00421-201ENST00000413833 ARAP1Q96P48 1450 aa33.57■■■□□ 2.97
LINC00421-201ENST00000413833 CYB5RLQ6IPT4 315 aa33.57■■■□□ 2.96
LINC00421-201ENST00000413833 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
LINC00421-201ENST00000413833 SOGA1O94964 1423 aa33.42■■■□□ 2.94
LINC00421-201ENST00000413833 FBLN2P98095 1184 aa33.41■■■□□ 2.94
LINC00421-201ENST00000413833 TDRD9Q8NDG6 1382 aaKnown RBP33.41■■■□□ 2.94
LINC00421-201ENST00000413833 WDR97A6NE52 1622 aa33.39■■■□□ 2.93
LINC00421-201ENST00000413833 CLASP1Q7Z460 1538 aa33.37■■■□□ 2.93
LINC00421-201ENST00000413833 SNAPC4Q5SXM2 1469 aa33.35■■■□□ 2.93
LINC00421-201ENST00000413833 FGD5Q6ZNL6 1462 aa33.35■■■□□ 2.93
LINC00421-201ENST00000413833 CUX1P39880 1505 aa33.31■■■□□ 2.92
LINC00421-201ENST00000413833 TRHP20396 242 aaPredicted RBP33.26■■■□□ 2.91
LINC00421-201ENST00000413833 MAGI1Q96QZ7 1491 aaPredicted RBP33.25■■■□□ 2.91
LINC00421-201ENST00000413833 SYNJ1O43426 1573 aa33.21■■■□□ 2.91
LINC00421-201ENST00000413833 GRIN2BQ13224 1484 aa33.19■■■□□ 2.9
LINC00421-201ENST00000413833 SYNJ2O15056 1496 aa33.14■■■□□ 2.9
LINC00421-201ENST00000413833 CHMP7Q8WUX9 453 aaPredicted RBP33.14■■■□□ 2.9
LINC00421-201ENST00000413833 PBRM1Q86U86 1689 aa33.11■■■□□ 2.89
LINC00421-201ENST00000413833 GAPVD1Q14C86 1478 aa33.03■■■□□ 2.88
LINC00421-201ENST00000413833 ABCA5Q8WWZ7 1642 aa33.01■■■□□ 2.87
LINC00421-201ENST00000413833 ABCA10Q8WWZ4 1543 aa32.97■■■□□ 2.87
LINC00421-201ENST00000413833 ERCC6L2Q5T890 1561 aa32.82■■■□□ 2.84
LINC00421-201ENST00000413833 GRIN2AQ12879 1464 aa32.79■■■□□ 2.84
LINC00421-201ENST00000413833 ADAMTS12P58397 1594 aa32.75■■■□□ 2.83
LINC00421-201ENST00000413833 CEP170Q5SW79 1584 aa32.74■■■□□ 2.83
LINC00421-201ENST00000413833 NUP160Q12769 1436 aa32.73■■■□□ 2.83
LINC00421-201ENST00000413833 BIVM-ERCC5R4GMW8 1640 aa32.69■■■□□ 2.82
LINC00421-201ENST00000413833 WRNQ14191 1432 aaPredicted RBP eCLIP32.69■■■□□ 2.82
LINC00421-201ENST00000413833 SHROOM2Q13796 1616 aa32.68■■■□□ 2.82
LINC00421-201ENST00000413833 TOP2BQ02880 1626 aa32.66■■■□□ 2.82
LINC00421-201ENST00000413833 FHAD1B1AJZ9 1412 aa32.59■■■□□ 2.81
LINC00421-201ENST00000413833 AEBP2Q6ZN18 517 aaPredicted RBP32.54■■■□□ 2.8
LINC00421-201ENST00000413833 ERICH3Q5RHP9 1530 aa32.54■■■□□ 2.8
LINC00421-201ENST00000413833 SUPT5HO00267 1087 aaKnown RBP32.53■■■□□ 2.8
LINC00421-201ENST00000413833 KIF13AQ9H1H9 1805 aa32.48■■■□□ 2.79
LINC00421-201ENST00000413833 PRG4Q92954 1404 aaPredicted RBP32.37■■■□□ 2.77
LINC00421-201ENST00000413833 RUSC2Q8N2Y8 1516 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms