RNA–Protein interactions for RNA: ENST00000397958.5

HGNC:18790-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HGNC:18790, Length 2,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HGNC:18790-201ENST00000397958 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
HGNC:18790-201ENST00000397958 DCAF8L2P0C7V8 631 aa25.79■■□□□ 1.72
HGNC:18790-201ENST00000397958 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
HGNC:18790-201ENST00000397958 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.66
HGNC:18790-201ENST00000397958 ABCC9O60706 1549 aa25.11■■□□□ 1.61
HGNC:18790-201ENST00000397958 ZCCHC6Q5VYS8 1495 aaKnown RBP25.09■■□□□ 1.61
HGNC:18790-201ENST00000397958 SUPT5HO00267 1087 aaKnown RBP24.51■■□□□ 1.51
HGNC:18790-201ENST00000397958 DCAF1Q9Y4B6 1507 aa24.3■■□□□ 1.48
HGNC:18790-201ENST00000397958 SCRIBQ14160 1630 aa24.3■■□□□ 1.48
HGNC:18790-201ENST00000397958 PABPN1Q86U42 306 aaKnown RBP eCLIP24.03■■□□□ 1.44
HGNC:18790-201ENST00000397958 NACADO15069 1562 aa24.02■■□□□ 1.43
HGNC:18790-201ENST00000397958 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
HGNC:18790-201ENST00000397958 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
HGNC:18790-201ENST00000397958 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
HGNC:18790-201ENST00000397958 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
HGNC:18790-201ENST00000397958 HRCP23327 699 aa23.48■■□□□ 1.35
HGNC:18790-201ENST00000397958 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
HGNC:18790-201ENST00000397958 MROH2BQ7Z745 1585 aa23.39■■□□□ 1.34
HGNC:18790-201ENST00000397958 BICRAQ9NZM4 1560 aa23.37■■□□□ 1.33
HGNC:18790-201ENST00000397958 WIZO95785 1651 aa23.22■■□□□ 1.31
HGNC:18790-201ENST00000397958 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
HGNC:18790-201ENST00000397958 PCGF6Q9BYE7 350 aa23.04■■□□□ 1.28
HGNC:18790-201ENST00000397958 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
HGNC:18790-201ENST00000397958 SMARCA4P51532 1647 aa22.98■■□□□ 1.27
HGNC:18790-201ENST00000397958 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
HGNC:18790-201ENST00000397958 EHMT2Q96KQ7 1210 aa22.85■■□□□ 1.25
HGNC:18790-201ENST00000397958 FAM9AQ8IZU1 332 aaPredicted RBP22.78■■□□□ 1.24
HGNC:18790-201ENST00000397958 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
HGNC:18790-201ENST00000397958 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
HGNC:18790-201ENST00000397958 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
HGNC:18790-201ENST00000397958 LOC105371045A0A1W2PR82 267 aa22.69■■□□□ 1.22
HGNC:18790-201ENST00000397958 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
HGNC:18790-201ENST00000397958 DNAJC5BQ9UF47 199 aa22.65■■□□□ 1.22
HGNC:18790-201ENST00000397958 TOP2AP11388 1531 aaKnown RBP22.63■■□□□ 1.21
HGNC:18790-201ENST00000397958 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
HGNC:18790-201ENST00000397958 SMARCA2P51531 1590 aa22.56■■□□□ 1.2
HGNC:18790-201ENST00000397958 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
HGNC:18790-201ENST00000397958 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
HGNC:18790-201ENST00000397958 PEG3Q9GZU2 1588 aa22.41■■□□□ 1.18
HGNC:18790-201ENST00000397958 CC2D2AQ9P2K1 1620 aa22.4■■□□□ 1.18
HGNC:18790-201ENST00000397958 NCAPD3P42695 1498 aa22.33■■□□□ 1.17
HGNC:18790-201ENST00000397958 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.16
HGNC:18790-201ENST00000397958 ZEB1P37275 1124 aaPredicted RBP22.3■■□□□ 1.16
HGNC:18790-201ENST00000397958 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
HGNC:18790-201ENST00000397958 SOGA1O94964 1423 aa22.11■■□□□ 1.13
HGNC:18790-201ENST00000397958 RUSC2Q8N2Y8 1516 aa22.1■■□□□ 1.13
HGNC:18790-201ENST00000397958 NESP48681 1621 aa22.09■■□□□ 1.13
HGNC:18790-201ENST00000397958 SCAF1Q9H7N4 1312 aaKnown RBP22.07■■□□□ 1.12
HGNC:18790-201ENST00000397958 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
HGNC:18790-201ENST00000397958 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
HGNC:18790-201ENST00000397958 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
HGNC:18790-201ENST00000397958 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
HGNC:18790-201ENST00000397958 CFTRP13569 1480 aa21.93■■□□□ 1.1
HGNC:18790-201ENST00000397958 UBTFP17480 764 aaKnown RBP21.83■■□□□ 1.09
HGNC:18790-201ENST00000397958 CSRNP3Q8WYN3 585 aa21.83■■□□□ 1.09
HGNC:18790-201ENST00000397958 CUX1P39880 1505 aa21.79■■□□□ 1.08
HGNC:18790-201ENST00000397958 TTBK1Q5TCY1 1321 aaPredicted RBP21.79■■□□□ 1.08
HGNC:18790-201ENST00000397958 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
HGNC:18790-201ENST00000397958 TOP2BQ02880 1626 aa21.64■■□□□ 1.05
HGNC:18790-201ENST00000397958 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
HGNC:18790-201ENST00000397958 ACIN1Q9UKV3 1341 aaKnown RBP21.6■■□□□ 1.05
HGNC:18790-201ENST00000397958 FGD5Q6ZNL6 1462 aa21.57■■□□□ 1.04
HGNC:18790-201ENST00000397958 RAPGEF2Q9Y4G8 1499 aa21.53■■□□□ 1.04
HGNC:18790-201ENST00000397958 CUX2O14529 1486 aa21.53■■□□□ 1.04
HGNC:18790-201ENST00000397958 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.03
HGNC:18790-201ENST00000397958 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
HGNC:18790-201ENST00000397958 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
HGNC:18790-201ENST00000397958 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
HGNC:18790-201ENST00000397958 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
HGNC:18790-201ENST00000397958 KIF21AQ7Z4S6 1674 aa21.48■■□□□ 1.03
HGNC:18790-201ENST00000397958 PDS5BQ9NTI5 1447 aa21.47■■□□□ 1.03
HGNC:18790-201ENST00000397958 TOPBP1Q92547 1522 aa21.47■■□□□ 1.03
HGNC:18790-201ENST00000397958 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
HGNC:18790-201ENST00000397958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
HGNC:18790-201ENST00000397958 CCER1Q8TC90 406 aaPredicted RBP21.44■■□□□ 1.02
HGNC:18790-201ENST00000397958 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
HGNC:18790-201ENST00000397958 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
HGNC:18790-201ENST00000397958 CEP162Q5TB80 1403 aa21.42■■□□□ 1.02
HGNC:18790-201ENST00000397958 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
HGNC:18790-201ENST00000397958 MYT1Q01538 1121 aa21.42■■□□□ 1.02
HGNC:18790-201ENST00000397958 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.01
HGNC:18790-201ENST00000397958 EEA1Q15075 1411 aa21.39■■□□□ 1.01
HGNC:18790-201ENST00000397958 IGF1RP08069 1367 aa21.39■■□□□ 1.01
HGNC:18790-201ENST00000397958 DIEXFQ68CQ4 756 aaKnown RBP21.37■■□□□ 1.01
HGNC:18790-201ENST00000397958 P3H3Q8IVL6 736 aa21.37■■□□□ 1.01
HGNC:18790-201ENST00000397958 GOLGA3Q08378 1498 aa21.37■■□□□ 1.01
HGNC:18790-201ENST00000397958 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
HGNC:18790-201ENST00000397958 GTF3C3Q9Y5Q9 886 aa21.36■■□□□ 1.01
HGNC:18790-201ENST00000397958 TNIKQ9UKE5 1360 aa21.35■■□□□ 1.01
HGNC:18790-201ENST00000397958 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1
HGNC:18790-201ENST00000397958 AQRO60306 1485 aaKnown RBP eCLIP21.28■■□□□ 1
HGNC:18790-201ENST00000397958 CARMIL1Q5VZK9 1371 aa21.27■■□□□ 1
HGNC:18790-201ENST00000397958 PRXQ9BXM0 1461 aa21.25■□□□□ 0.99
HGNC:18790-201ENST00000397958 CLIP1P30622 1438 aa21.23■□□□□ 0.99
HGNC:18790-201ENST00000397958 ZNF608Q9ULD9 1512 aaPredicted RBP21.2■□□□□ 0.98
HGNC:18790-201ENST00000397958 FBLN2P98095 1184 aa21.19■□□□□ 0.98
HGNC:18790-201ENST00000397958 ATP1B4Q9UN42 357 aaPredicted RBP21.18■□□□□ 0.98
HGNC:18790-201ENST00000397958 KIF21BO75037 1637 aa21.17■□□□□ 0.98
HGNC:18790-201ENST00000397958 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
HGNC:18790-201ENST00000397958 ABCA10Q8WWZ4 1543 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms