RNA–Protein interactions for RNA: ENST00000482890.5

TFAP2A-213, Transcript of transcription factor AP-2 alpha, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TFAP2A, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-213ENST00000482890 NISCHQ9Y2I1 1504 aa32.5■■■□□ 2.79
TFAP2A-213ENST00000482890 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
TFAP2A-213ENST00000482890 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
TFAP2A-213ENST00000482890 SHROOM4Q9ULL8 1493 aa27.04■■□□□ 1.92
TFAP2A-213ENST00000482890 DCAF1Q9Y4B6 1507 aa26.82■■□□□ 1.88
TFAP2A-213ENST00000482890 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
TFAP2A-213ENST00000482890 ABCC9O60706 1549 aa26.35■■□□□ 1.81
TFAP2A-213ENST00000482890 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
TFAP2A-213ENST00000482890 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
TFAP2A-213ENST00000482890 NACADO15069 1562 aa25.98■■□□□ 1.75
TFAP2A-213ENST00000482890 SCRIBQ14160 1630 aa25.92■■□□□ 1.74
TFAP2A-213ENST00000482890 RB1CC1Q8TDY2 1594 aa25.62■■□□□ 1.69
TFAP2A-213ENST00000482890 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
TFAP2A-213ENST00000482890 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
TFAP2A-213ENST00000482890 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
TFAP2A-213ENST00000482890 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
TFAP2A-213ENST00000482890 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
TFAP2A-213ENST00000482890 BAZ1AQ9NRL2 1556 aaPredicted RBP25.03■■□□□ 1.6
TFAP2A-213ENST00000482890 WIZO95785 1651 aa24.98■■□□□ 1.59
TFAP2A-213ENST00000482890 PABPN1Q86U42 306 aaKnown RBP eCLIP24.93■■□□□ 1.58
TFAP2A-213ENST00000482890 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
TFAP2A-213ENST00000482890 SMARCA4P51532 1647 aa24.85■■□□□ 1.57
TFAP2A-213ENST00000482890 TOP2AP11388 1531 aaKnown RBP24.69■■□□□ 1.54
TFAP2A-213ENST00000482890 TRIM41Q8WV44 630 aa24.65■■□□□ 1.54
TFAP2A-213ENST00000482890 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
TFAP2A-213ENST00000482890 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
TFAP2A-213ENST00000482890 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
TFAP2A-213ENST00000482890 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
TFAP2A-213ENST00000482890 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
TFAP2A-213ENST00000482890 ATAD2BQ9ULI0 1458 aa24.34■■□□□ 1.49
TFAP2A-213ENST00000482890 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
TFAP2A-213ENST00000482890 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
TFAP2A-213ENST00000482890 ABCC8Q09428 1581 aa24.18■■□□□ 1.46
TFAP2A-213ENST00000482890 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
TFAP2A-213ENST00000482890 PCGF6Q9BYE7 350 aa24■■□□□ 1.43
TFAP2A-213ENST00000482890 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
TFAP2A-213ENST00000482890 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
TFAP2A-213ENST00000482890 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
TFAP2A-213ENST00000482890 SOGA1O94964 1423 aa23.88■■□□□ 1.41
TFAP2A-213ENST00000482890 EEA1Q15075 1411 aa23.85■■□□□ 1.41
TFAP2A-213ENST00000482890 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
TFAP2A-213ENST00000482890 TRIM26Q12899 539 aaPredicted RBP23.8■■□□□ 1.4
TFAP2A-213ENST00000482890 CC2D2AQ9P2K1 1620 aa23.78■■□□□ 1.4
TFAP2A-213ENST00000482890 RUSC2Q8N2Y8 1516 aa23.76■■□□□ 1.39
TFAP2A-213ENST00000482890 CSRNP3Q8WYN3 585 aa23.75■■□□□ 1.39
TFAP2A-213ENST00000482890 HRCP23327 699 aa23.72■■□□□ 1.39
TFAP2A-213ENST00000482890 CFTRP13569 1480 aa23.65■■□□□ 1.38
TFAP2A-213ENST00000482890 TOP2BQ02880 1626 aa23.64■■□□□ 1.38
TFAP2A-213ENST00000482890 TNIKQ9UKE5 1360 aa23.63■■□□□ 1.37
TFAP2A-213ENST00000482890 BIVM-ERCC5R4GMW8 1640 aa23.58■■□□□ 1.37
TFAP2A-213ENST00000482890 GOLGA3Q08378 1498 aa23.57■■□□□ 1.36
TFAP2A-213ENST00000482890 CEP162Q5TB80 1403 aa23.56■■□□□ 1.36
TFAP2A-213ENST00000482890 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
TFAP2A-213ENST00000482890 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
TFAP2A-213ENST00000482890 KIF21BO75037 1637 aa23.5■■□□□ 1.35
TFAP2A-213ENST00000482890 CUX1P39880 1505 aa23.49■■□□□ 1.35
TFAP2A-213ENST00000482890 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
TFAP2A-213ENST00000482890 PRDM2Q13029 1718 aa23.44■■□□□ 1.34
TFAP2A-213ENST00000482890 DNAJC5BQ9UF47 199 aa23.39■■□□□ 1.34
TFAP2A-213ENST00000482890 PPARGC1BQ86YN6 1023 aaKnown RBP23.37■■□□□ 1.33
TFAP2A-213ENST00000482890 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
TFAP2A-213ENST00000482890 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
TFAP2A-213ENST00000482890 PRXQ9BXM0 1461 aa23.27■■□□□ 1.32
TFAP2A-213ENST00000482890 CLIP1P30622 1438 aa23.24■■□□□ 1.31
TFAP2A-213ENST00000482890 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
TFAP2A-213ENST00000482890 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
TFAP2A-213ENST00000482890 NESP48681 1621 aa23.18■■□□□ 1.3
TFAP2A-213ENST00000482890 FGD5Q6ZNL6 1462 aa23.14■■□□□ 1.3
TFAP2A-213ENST00000482890 CUX2O14529 1486 aa23.11■■□□□ 1.29
TFAP2A-213ENST00000482890 VPS8Q8N3P4 1428 aa23.11■■□□□ 1.29
TFAP2A-213ENST00000482890 ZEB1P37275 1124 aaPredicted RBP23.1■■□□□ 1.29
TFAP2A-213ENST00000482890 LAMC3Q9Y6N6 1575 aa23.07■■□□□ 1.28
TFAP2A-213ENST00000482890 IGF1RP08069 1367 aa23.06■■□□□ 1.28
TFAP2A-213ENST00000482890 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
TFAP2A-213ENST00000482890 DNMBPQ6XZF7 1577 aa23.06■■□□□ 1.28
TFAP2A-213ENST00000482890 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
TFAP2A-213ENST00000482890 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
TFAP2A-213ENST00000482890 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
TFAP2A-213ENST00000482890 CARMIL1Q5VZK9 1371 aa22.94■■□□□ 1.26
TFAP2A-213ENST00000482890 ARAP1Q96P48 1450 aa22.94■■□□□ 1.26
TFAP2A-213ENST00000482890 ABCA10Q8WWZ4 1543 aa22.93■■□□□ 1.26
TFAP2A-213ENST00000482890 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
TFAP2A-213ENST00000482890 PDS5BQ9NTI5 1447 aa22.92■■□□□ 1.26
TFAP2A-213ENST00000482890 APLP2Q06481 763 aa22.92■■□□□ 1.26
TFAP2A-213ENST00000482890 URB2Q14146 1524 aaKnown RBP22.9■■□□□ 1.26
TFAP2A-213ENST00000482890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.84■■□□□ 1.25
TFAP2A-213ENST00000482890 ARHGAP35Q9NRY4 1499 aa22.84■■□□□ 1.25
TFAP2A-213ENST00000482890 KIF21AQ7Z4S6 1674 aa22.82■■□□□ 1.24
TFAP2A-213ENST00000482890 CCER1Q8TC90 406 aaPredicted RBP22.78■■□□□ 1.24
TFAP2A-213ENST00000482890 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
TFAP2A-213ENST00000482890 CUL7Q14999 1698 aa22.72■■□□□ 1.23
TFAP2A-213ENST00000482890 KANK4Q5T7N3 995 aaPredicted RBP22.67■■□□□ 1.22
TFAP2A-213ENST00000482890 TDRD9Q8NDG6 1382 aaKnown RBP22.67■■□□□ 1.22
TFAP2A-213ENST00000482890 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
TFAP2A-213ENST00000482890 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
TFAP2A-213ENST00000482890 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
TFAP2A-213ENST00000482890 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
TFAP2A-213ENST00000482890 MRC2Q9UBG0 1479 aa22.58■■□□□ 1.21
TFAP2A-213ENST00000482890 MAP3K1Q13233 1512 aa22.56■■□□□ 1.2
TFAP2A-213ENST00000482890 FHAD1B1AJZ9 1412 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms