RNA–Protein interactions for RNA: ENST00000247226.12

PLEKHG3-201, Transcript of pleckstrin homology and RhoGEF domain containing G3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLEKHG3, Length 10,351 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHG3-201ENST00000247226 DCAF8L2P0C7V8 631 aa20.34■□□□□ 0.85
PLEKHG3-201ENST00000247226 NISCHQ9Y2I1 1504 aa19.67■□□□□ 0.74
PLEKHG3-201ENST00000247226 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
PLEKHG3-201ENST00000247226 SUPT5HO00267 1087 aaKnown RBP19.35■□□□□ 0.69
PLEKHG3-201ENST00000247226 APLP2Q06481 763 aa19.06■□□□□ 0.64
PLEKHG3-201ENST00000247226 SHROOM4Q9ULL8 1493 aa19.01■□□□□ 0.63
PLEKHG3-201ENST00000247226 FAM9AQ8IZU1 332 aaPredicted RBP18.97■□□□□ 0.63
PLEKHG3-201ENST00000247226 CCER1Q8TC90 406 aaPredicted RBP18.67■□□□□ 0.58
PLEKHG3-201ENST00000247226 EHMT2Q96KQ7 1210 aa18.66■□□□□ 0.58
PLEKHG3-201ENST00000247226 CENPBP07199 599 aaPredicted RBP18.54■□□□□ 0.56
PLEKHG3-201ENST00000247226 ERICH6Q7L0X2 663 aa18.52■□□□□ 0.56
PLEKHG3-201ENST00000247226 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
PLEKHG3-201ENST00000247226 MYT1Q01538 1121 aa18.31■□□□□ 0.52
PLEKHG3-201ENST00000247226 PCGF6Q9BYE7 350 aa18.26■□□□□ 0.51
PLEKHG3-201ENST00000247226 NEFLP07196 543 aa18.24■□□□□ 0.51
PLEKHG3-201ENST00000247226 TTBK1Q5TCY1 1321 aaPredicted RBP18.19■□□□□ 0.5
PLEKHG3-201ENST00000247226 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
PLEKHG3-201ENST00000247226 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
PLEKHG3-201ENST00000247226 ATP1B4Q9UN42 357 aaPredicted RBP17.99■□□□□ 0.47
PLEKHG3-201ENST00000247226 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
PLEKHG3-201ENST00000247226 DAXXQ9UER7 740 aaPredicted RBP17.86■□□□□ 0.45
PLEKHG3-201ENST00000247226 YTHDC1Q96MU7 727 aaKnown RBP17.78■□□□□ 0.44
PLEKHG3-201ENST00000247226 TRIM26Q12899 539 aaPredicted RBP17.62■□□□□ 0.41
PLEKHG3-201ENST00000247226 MYT1LQ9UL68 1186 aa17.46■□□□□ 0.39
PLEKHG3-201ENST00000247226 ZNF316A6NFI3 1004 aaPredicted RBP17.42■□□□□ 0.38
PLEKHG3-201ENST00000247226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.41■□□□□ 0.38
PLEKHG3-201ENST00000247226 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
PLEKHG3-201ENST00000247226 RTL5Q5HYW3 569 aaPredicted RBP17.37■□□□□ 0.37
PLEKHG3-201ENST00000247226 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
PLEKHG3-201ENST00000247226 HRCP23327 699 aa17.33■□□□□ 0.37
PLEKHG3-201ENST00000247226 ITGAEP38570 1179 aa17.29■□□□□ 0.36
PLEKHG3-201ENST00000247226 PPARGC1BQ86YN6 1023 aaKnown RBP17.26■□□□□ 0.35
PLEKHG3-201ENST00000247226 CLSPNQ9HAW4 1339 aa17.25■□□□□ 0.35
PLEKHG3-201ENST00000247226 SLC4A1APQ9BWU0 796 aaKnown RBP17.2■□□□□ 0.34
PLEKHG3-201ENST00000247226 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
PLEKHG3-201ENST00000247226 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
PLEKHG3-201ENST00000247226 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
PLEKHG3-201ENST00000247226 FAM50AQ14320 339 aaKnown RBP17■□□□□ 0.31
PLEKHG3-201ENST00000247226 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
PLEKHG3-201ENST00000247226 ANP32CO43423 234 aa16.92■□□□□ 0.3
PLEKHG3-201ENST00000247226 TRIM52Q96A61 297 aa16.91■□□□□ 0.3
PLEKHG3-201ENST00000247226 CANXP27824 592 aaKnown RBP16.88■□□□□ 0.29
PLEKHG3-201ENST00000247226 LOC105371045A0A1W2PR82 267 aa16.87■□□□□ 0.29
PLEKHG3-201ENST00000247226 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
PLEKHG3-201ENST00000247226 NEFMP07197 916 aa16.86■□□□□ 0.29
PLEKHG3-201ENST00000247226 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.29
PLEKHG3-201ENST00000247226 ZNF326Q5BKZ1 582 aaKnown RBP16.76■□□□□ 0.27
PLEKHG3-201ENST00000247226 ABCC9O60706 1549 aa16.76■□□□□ 0.27
PLEKHG3-201ENST00000247226 NEUROD1Q13562 356 aa16.75■□□□□ 0.27
PLEKHG3-201ENST00000247226 ANP32AP39687 249 aaKnown RBP16.75■□□□□ 0.27
PLEKHG3-201ENST00000247226 ANP32BQ92688 251 aaKnown RBP16.69■□□□□ 0.26
PLEKHG3-201ENST00000247226 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
PLEKHG3-201ENST00000247226 SLC24A1O60721 1099 aa16.63■□□□□ 0.25
PLEKHG3-201ENST00000247226 BCANQ96GW7 911 aa16.61■□□□□ 0.25
PLEKHG3-201ENST00000247226 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
PLEKHG3-201ENST00000247226 UPF2Q9HAU5 1272 aaKnown RBP16.57■□□□□ 0.24
PLEKHG3-201ENST00000247226 HSP90AA1P07900 732 aaKnown RBP16.55■□□□□ 0.24
PLEKHG3-201ENST00000247226 FBLN2P98095 1184 aa16.54■□□□□ 0.24
PLEKHG3-201ENST00000247226 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
PLEKHG3-201ENST00000247226 ESF1Q9H501 851 aaKnown RBP16.49■□□□□ 0.23
PLEKHG3-201ENST00000247226 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
PLEKHG3-201ENST00000247226 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
PLEKHG3-201ENST00000247226 GLIPR1L2Q4G1C9 344 aa16.45■□□□□ 0.22
PLEKHG3-201ENST00000247226 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
PLEKHG3-201ENST00000247226 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
PLEKHG3-201ENST00000247226 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.35■□□□□ 0.21
PLEKHG3-201ENST00000247226 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
PLEKHG3-201ENST00000247226 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.21
PLEKHG3-201ENST00000247226 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
PLEKHG3-201ENST00000247226 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
PLEKHG3-201ENST00000247226 ZCCHC6Q5VYS8 1495 aaKnown RBP16.3■□□□□ 0.2
PLEKHG3-201ENST00000247226 MYH16Q9H6N6 1097 aa16.29■□□□□ 0.2
PLEKHG3-201ENST00000247226 RB1CC1Q8TDY2 1594 aa16.28■□□□□ 0.2
PLEKHG3-201ENST00000247226 ARID3CA6NKF2 412 aa16.23■□□□□ 0.19
PLEKHG3-201ENST00000247226 P3H3Q8IVL6 736 aa16.22■□□□□ 0.19
PLEKHG3-201ENST00000247226 CDK11BP21127 795 aaKnown RBP16.22■□□□□ 0.19
PLEKHG3-201ENST00000247226 HNRNPUQ00839 825 aaKnown RBP eCLIP16.21■□□□□ 0.19
PLEKHG3-201ENST00000247226 WDR43Q15061 677 aaKnown RBP eCLIP16.2■□□□□ 0.18
PLEKHG3-201ENST00000247226 EIF5BO60841 1220 aaKnown RBP16.2■□□□□ 0.18
PLEKHG3-201ENST00000247226 NPM1P06748 294 aaKnown RBP eCLIP16.19■□□□□ 0.18
PLEKHG3-201ENST00000247226 CCDC136Q96JN2 1154 aa16.19■□□□□ 0.18
PLEKHG3-201ENST00000247226 FKBP8Q14318 412 aa16.18■□□□□ 0.18
PLEKHG3-201ENST00000247226 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
PLEKHG3-201ENST00000247226 ANP32EQ9BTT0 268 aa16.15■□□□□ 0.18
PLEKHG3-201ENST00000247226 MTUS2Q5JR59 1369 aa16.14■□□□□ 0.17
PLEKHG3-201ENST00000247226 BECN1Q14457 450 aa16.13■□□□□ 0.17
PLEKHG3-201ENST00000247226 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
PLEKHG3-201ENST00000247226 CHGAP10645 457 aaKnown RBP16.12■□□□□ 0.17
PLEKHG3-201ENST00000247226 CLIP1P30622 1438 aa16.11■□□□□ 0.17
PLEKHG3-201ENST00000247226 EEA1Q15075 1411 aa16.11■□□□□ 0.17
PLEKHG3-201ENST00000247226 FAM9BQ8IZU0 186 aa16.1■□□□□ 0.17
PLEKHG3-201ENST00000247226 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
PLEKHG3-201ENST00000247226 GOLGA6L22H0YM25 854 aa16.06■□□□□ 0.16
PLEKHG3-201ENST00000247226 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
PLEKHG3-201ENST00000247226 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
PLEKHG3-201ENST00000247226 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
PLEKHG3-201ENST00000247226 NACADO15069 1562 aa16.04■□□□□ 0.16
PLEKHG3-201ENST00000247226 CASC1Q6TDU7 716 aa16.04■□□□□ 0.16
PLEKHG3-201ENST00000247226 TSPY4P0CV99 314 aa16.03■□□□□ 0.16
PLEKHG3-201ENST00000247226 TSPY10P0CW01 314 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms