RNA–Protein interactions for RNA: ENST00000260665.11

LRPPRC-201, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPPRC, Length 6,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-201ENST00000260665 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
LRPPRC-201ENST00000260665 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
LRPPRC-201ENST00000260665 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
LRPPRC-201ENST00000260665 ERICH6Q7L0X2 663 aa19.31■□□□□ 0.68
LRPPRC-201ENST00000260665 MYT1Q01538 1121 aa19.21■□□□□ 0.67
LRPPRC-201ENST00000260665 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
LRPPRC-201ENST00000260665 CCER1Q8TC90 406 aaPredicted RBP19.08■□□□□ 0.65
LRPPRC-201ENST00000260665 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
LRPPRC-201ENST00000260665 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
LRPPRC-201ENST00000260665 APLP2Q06481 763 aa18.86■□□□□ 0.61
LRPPRC-201ENST00000260665 SHROOM4Q9ULL8 1493 aa18.75■□□□□ 0.59
LRPPRC-201ENST00000260665 TTBK1Q5TCY1 1321 aaPredicted RBP18.68■□□□□ 0.58
LRPPRC-201ENST00000260665 ZEB1P37275 1124 aaPredicted RBP18.65■□□□□ 0.58
LRPPRC-201ENST00000260665 NEFLP07196 543 aa18.61■□□□□ 0.57
LRPPRC-201ENST00000260665 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
LRPPRC-201ENST00000260665 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
LRPPRC-201ENST00000260665 DAXXQ9UER7 740 aaPredicted RBP18.23■□□□□ 0.51
LRPPRC-201ENST00000260665 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
LRPPRC-201ENST00000260665 ATP1B4Q9UN42 357 aaPredicted RBP17.99■□□□□ 0.47
LRPPRC-201ENST00000260665 RTL5Q5HYW3 569 aaPredicted RBP17.98■□□□□ 0.47
LRPPRC-201ENST00000260665 HRCP23327 699 aa17.96■□□□□ 0.47
LRPPRC-201ENST00000260665 TRIM41Q8WV44 630 aa17.93■□□□□ 0.46
LRPPRC-201ENST00000260665 UBTFP17480 764 aaKnown RBP17.84■□□□□ 0.45
LRPPRC-201ENST00000260665 PPARGC1BQ86YN6 1023 aaKnown RBP17.83■□□□□ 0.45
LRPPRC-201ENST00000260665 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
LRPPRC-201ENST00000260665 ZNF316A6NFI3 1004 aaPredicted RBP17.79■□□□□ 0.44
LRPPRC-201ENST00000260665 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
LRPPRC-201ENST00000260665 NISCHQ9Y2I1 1504 aa17.69■□□□□ 0.42
LRPPRC-201ENST00000260665 CLSPNQ9HAW4 1339 aa17.62■□□□□ 0.41
LRPPRC-201ENST00000260665 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
LRPPRC-201ENST00000260665 DIEXFQ68CQ4 756 aaKnown RBP17.54■□□□□ 0.4
LRPPRC-201ENST00000260665 ITGAEP38570 1179 aa17.51■□□□□ 0.39
LRPPRC-201ENST00000260665 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
LRPPRC-201ENST00000260665 BCANQ96GW7 911 aa17.49■□□□□ 0.39
LRPPRC-201ENST00000260665 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
LRPPRC-201ENST00000260665 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.38
LRPPRC-201ENST00000260665 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
LRPPRC-201ENST00000260665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.32■□□□□ 0.36
LRPPRC-201ENST00000260665 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.35
LRPPRC-201ENST00000260665 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
LRPPRC-201ENST00000260665 MYT1LQ9UL68 1186 aa17.21■□□□□ 0.35
LRPPRC-201ENST00000260665 GLIPR1L2Q4G1C9 344 aa17.19■□□□□ 0.34
LRPPRC-201ENST00000260665 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
LRPPRC-201ENST00000260665 ACIN1Q9UKV3 1341 aaKnown RBP17.12■□□□□ 0.33
LRPPRC-201ENST00000260665 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
LRPPRC-201ENST00000260665 ANP32CO43423 234 aa17.07■□□□□ 0.32
LRPPRC-201ENST00000260665 NPM2Q86SE8 214 aaKnown RBP17.04■□□□□ 0.32
LRPPRC-201ENST00000260665 CHIC1Q5VXU3 224 aa17.03■□□□□ 0.32
LRPPRC-201ENST00000260665 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
LRPPRC-201ENST00000260665 BCL11AQ9H165 835 aa16.99■□□□□ 0.31
LRPPRC-201ENST00000260665 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
LRPPRC-201ENST00000260665 CANXP27824 592 aaKnown RBP16.94■□□□□ 0.3
LRPPRC-201ENST00000260665 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
LRPPRC-201ENST00000260665 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
LRPPRC-201ENST00000260665 NBR1Q14596 966 aa16.85■□□□□ 0.29
LRPPRC-201ENST00000260665 FKBP8Q14318 412 aa16.84■□□□□ 0.29
LRPPRC-201ENST00000260665 ZNF326Q5BKZ1 582 aaKnown RBP16.82■□□□□ 0.28
LRPPRC-201ENST00000260665 HSP90AA1P07900 732 aaKnown RBP16.79■□□□□ 0.28
LRPPRC-201ENST00000260665 ARXQ96QS3 562 aa16.75■□□□□ 0.27
LRPPRC-201ENST00000260665 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
LRPPRC-201ENST00000260665 UPF2Q9HAU5 1272 aaKnown RBP16.69■□□□□ 0.26
LRPPRC-201ENST00000260665 NEFMP07197 916 aa16.64■□□□□ 0.25
LRPPRC-201ENST00000260665 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.24
LRPPRC-201ENST00000260665 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
LRPPRC-201ENST00000260665 CCDC136Q96JN2 1154 aa16.55■□□□□ 0.24
LRPPRC-201ENST00000260665 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
LRPPRC-201ENST00000260665 ANP32EQ9BTT0 268 aa16.48■□□□□ 0.23
LRPPRC-201ENST00000260665 FAM9BQ8IZU0 186 aa16.48■□□□□ 0.23
LRPPRC-201ENST00000260665 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
LRPPRC-201ENST00000260665 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
LRPPRC-201ENST00000260665 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
LRPPRC-201ENST00000260665 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
LRPPRC-201ENST00000260665 RTN4Q9NQC3 1192 aaKnown RBP16.4■□□□□ 0.22
LRPPRC-201ENST00000260665 IRX6P78412 446 aaPredicted RBP16.39■□□□□ 0.21
LRPPRC-201ENST00000260665 ERICH6BQ5W0A0 696 aa16.36■□□□□ 0.21
LRPPRC-201ENST00000260665 NAP1L5Q96NT1 182 aaPredicted RBP16.35■□□□□ 0.21
LRPPRC-201ENST00000260665 DDRGK1Q96HY6 314 aa16.33■□□□□ 0.2
LRPPRC-201ENST00000260665 CDK11BP21127 795 aaKnown RBP16.31■□□□□ 0.2
LRPPRC-201ENST00000260665 BECN1Q14457 450 aa16.3■□□□□ 0.2
LRPPRC-201ENST00000260665 DNTTIP2Q5QJE6 756 aaKnown RBP16.28■□□□□ 0.2
LRPPRC-201ENST00000260665 PTMAP06454 111 aaKnown RBP16.27■□□□□ 0.2
LRPPRC-201ENST00000260665 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
LRPPRC-201ENST00000260665 TONSLQ96HA7 1378 aa16.26■□□□□ 0.19
LRPPRC-201ENST00000260665 NCLP19338 710 aaKnown RBP16.26■□□□□ 0.19
LRPPRC-201ENST00000260665 GOLGA6L22H0YM25 854 aa16.25■□□□□ 0.19
LRPPRC-201ENST00000260665 MIER1Q8N108 512 aa16.25■□□□□ 0.19
LRPPRC-201ENST00000260665 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
LRPPRC-201ENST00000260665 PPM1GO15355 546 aaPredicted RBP16.21■□□□□ 0.19
LRPPRC-201ENST00000260665 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
LRPPRC-201ENST00000260665 LAS1LQ9Y4W2 734 aaKnown RBP16.17■□□□□ 0.18
LRPPRC-201ENST00000260665 WDR43Q15061 677 aaKnown RBP eCLIP16.16■□□□□ 0.18
LRPPRC-201ENST00000260665 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
LRPPRC-201ENST00000260665 ARID3CA6NKF2 412 aa16.13■□□□□ 0.17
LRPPRC-201ENST00000260665 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
LRPPRC-201ENST00000260665 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
LRPPRC-201ENST00000260665 NOP58Q9Y2X3 529 aaKnown RBP16.1■□□□□ 0.17
LRPPRC-201ENST00000260665 TPRNQ4KMQ1 711 aa16.09■□□□□ 0.17
LRPPRC-201ENST00000260665 ZRSR1Q15695 479 aaKnown RBP16.08■□□□□ 0.17
LRPPRC-201ENST00000260665 DEKP35659 375 aaKnown RBP16.06■□□□□ 0.16
LRPPRC-201ENST00000260665 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms