RNA–Protein interactions for RNA: ENST00000295890.8

COX18-201, Transcript of cytochrome c oxidase assembly factor COX18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COX18, Length 6,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX18-201ENST00000295890 DCAF8L2P0C7V8 631 aa22.11■■□□□ 1.13
COX18-201ENST00000295890 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
COX18-201ENST00000295890 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
COX18-201ENST00000295890 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
COX18-201ENST00000295890 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.8
COX18-201ENST00000295890 APLP2Q06481 763 aa19.62■□□□□ 0.73
COX18-201ENST00000295890 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
COX18-201ENST00000295890 TTBK1Q5TCY1 1321 aaPredicted RBP19.48■□□□□ 0.71
COX18-201ENST00000295890 PELP1Q8IZL8 1130 aaKnown RBP19.45■□□□□ 0.7
COX18-201ENST00000295890 RANGAP1P46060 587 aaPredicted RBP19.37■□□□□ 0.69
COX18-201ENST00000295890 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
COX18-201ENST00000295890 ERICH6Q7L0X2 663 aa19.08■□□□□ 0.64
COX18-201ENST00000295890 PCGF6Q9BYE7 350 aa19■□□□□ 0.63
COX18-201ENST00000295890 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
COX18-201ENST00000295890 UBTFP17480 764 aaKnown RBP18.83■□□□□ 0.6
COX18-201ENST00000295890 MYT1LQ9UL68 1186 aa18.77■□□□□ 0.59
COX18-201ENST00000295890 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
COX18-201ENST00000295890 MYT1Q01538 1121 aa18.66■□□□□ 0.58
COX18-201ENST00000295890 CCER1Q8TC90 406 aaPredicted RBP18.63■□□□□ 0.57
COX18-201ENST00000295890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
COX18-201ENST00000295890 HNRNPUL2Q1KMD3 747 aaKnown RBP18.62■□□□□ 0.57
COX18-201ENST00000295890 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
COX18-201ENST00000295890 PPARGC1BQ86YN6 1023 aaKnown RBP18.5■□□□□ 0.55
COX18-201ENST00000295890 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
COX18-201ENST00000295890 NEFLP07196 543 aa18.41■□□□□ 0.54
COX18-201ENST00000295890 CNGB1Q14028 1251 aaPredicted RBP18.36■□□□□ 0.53
COX18-201ENST00000295890 ITGAEP38570 1179 aa18.34■□□□□ 0.53
COX18-201ENST00000295890 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
COX18-201ENST00000295890 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
COX18-201ENST00000295890 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
COX18-201ENST00000295890 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
COX18-201ENST00000295890 DAXXQ9UER7 740 aaPredicted RBP18.11■□□□□ 0.49
COX18-201ENST00000295890 ABCC9O60706 1549 aa18.07■□□□□ 0.48
COX18-201ENST00000295890 FBLN2P98095 1184 aa17.98■□□□□ 0.47
COX18-201ENST00000295890 FAM50AQ14320 339 aaKnown RBP17.82■□□□□ 0.44
COX18-201ENST00000295890 LOC105371045A0A1W2PR82 267 aa17.78■□□□□ 0.44
COX18-201ENST00000295890 TRIM52Q96A61 297 aa17.78■□□□□ 0.44
COX18-201ENST00000295890 TRIM26Q12899 539 aaPredicted RBP17.75■□□□□ 0.43
COX18-201ENST00000295890 CLSPNQ9HAW4 1339 aa17.74■□□□□ 0.43
COX18-201ENST00000295890 BCANQ96GW7 911 aa17.73■□□□□ 0.43
COX18-201ENST00000295890 BCL11AQ9H165 835 aa17.71■□□□□ 0.43
COX18-201ENST00000295890 ZNF316A6NFI3 1004 aaPredicted RBP17.7■□□□□ 0.42
COX18-201ENST00000295890 HRCP23327 699 aa17.68■□□□□ 0.42
COX18-201ENST00000295890 ARID3CA6NKF2 412 aa17.64■□□□□ 0.41
COX18-201ENST00000295890 ZNF326Q5BKZ1 582 aaKnown RBP17.62■□□□□ 0.41
COX18-201ENST00000295890 SLC24A1O60721 1099 aa17.61■□□□□ 0.41
COX18-201ENST00000295890 PLPPR3Q6T4P5 718 aa17.61■□□□□ 0.41
COX18-201ENST00000295890 RTL5Q5HYW3 569 aaPredicted RBP17.59■□□□□ 0.41
COX18-201ENST00000295890 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
COX18-201ENST00000295890 P3H3Q8IVL6 736 aa17.5■□□□□ 0.39
COX18-201ENST00000295890 ESF1Q9H501 851 aaKnown RBP17.49■□□□□ 0.39
COX18-201ENST00000295890 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
COX18-201ENST00000295890 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
COX18-201ENST00000295890 ZBTB47Q9UFB7 747 aaPredicted RBP17.35■□□□□ 0.37
COX18-201ENST00000295890 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
COX18-201ENST00000295890 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
COX18-201ENST00000295890 CHGAP10645 457 aaKnown RBP17.3■□□□□ 0.36
COX18-201ENST00000295890 NEFMP07197 916 aa17.29■□□□□ 0.36
COX18-201ENST00000295890 CANXP27824 592 aaKnown RBP17.23■□□□□ 0.35
COX18-201ENST00000295890 CDK11AQ9UQ88 783 aaPredicted RBP17.21■□□□□ 0.35
COX18-201ENST00000295890 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
COX18-201ENST00000295890 ANP32CO43423 234 aa17.15■□□□□ 0.34
COX18-201ENST00000295890 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
COX18-201ENST00000295890 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
COX18-201ENST00000295890 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
COX18-201ENST00000295890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
COX18-201ENST00000295890 A0A0G2JS52 829 aa17.05■□□□□ 0.32
COX18-201ENST00000295890 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
COX18-201ENST00000295890 EIF5BO60841 1220 aaKnown RBP17.03■□□□□ 0.32
COX18-201ENST00000295890 PLEKHG5O94827 1062 aa17■□□□□ 0.31
COX18-201ENST00000295890 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
COX18-201ENST00000295890 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
COX18-201ENST00000295890 ARXQ96QS3 562 aa16.95■□□□□ 0.3
COX18-201ENST00000295890 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
COX18-201ENST00000295890 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
COX18-201ENST00000295890 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
COX18-201ENST00000295890 C14orf37Q86TY3 774 aa16.87■□□□□ 0.29
COX18-201ENST00000295890 KCNH8Q96L42 1107 aa16.87■□□□□ 0.29
COX18-201ENST00000295890 ARID4BQ4LE39 1312 aaPredicted RBP16.87■□□□□ 0.29
COX18-201ENST00000295890 ANP32AP39687 249 aaKnown RBP16.86■□□□□ 0.29
COX18-201ENST00000295890 HSP90AA1P07900 732 aaKnown RBP16.82■□□□□ 0.28
COX18-201ENST00000295890 TSPY4P0CV99 314 aa16.82■□□□□ 0.28
COX18-201ENST00000295890 TSPY10P0CW01 314 aa16.82■□□□□ 0.28
COX18-201ENST00000295890 PPP1R15AO75807 674 aaPredicted RBP16.82■□□□□ 0.28
COX18-201ENST00000295890 TONSLQ96HA7 1378 aa16.81■□□□□ 0.28
COX18-201ENST00000295890 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
COX18-201ENST00000295890 NBR1Q14596 966 aa16.78■□□□□ 0.28
COX18-201ENST00000295890 HAP1P54257 671 aaPredicted RBP16.77■□□□□ 0.28
COX18-201ENST00000295890 FKBP8Q14318 412 aa16.74■□□□□ 0.27
COX18-201ENST00000295890 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
COX18-201ENST00000295890 ANP32BQ92688 251 aaKnown RBP16.7■□□□□ 0.26
COX18-201ENST00000295890 MTUS2Q5JR59 1369 aa16.69■□□□□ 0.26
COX18-201ENST00000295890 FAM9BQ8IZU0 186 aa16.69■□□□□ 0.26
COX18-201ENST00000295890 ERCC6Q03468 1493 aa16.67■□□□□ 0.26
COX18-201ENST00000295890 WDR43Q15061 677 aaKnown RBP eCLIP16.63■□□□□ 0.25
COX18-201ENST00000295890 ACIN1Q9UKV3 1341 aaKnown RBP16.63■□□□□ 0.25
COX18-201ENST00000295890 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
COX18-201ENST00000295890 IRX6P78412 446 aaPredicted RBP16.61■□□□□ 0.25
COX18-201ENST00000295890 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.25
COX18-201ENST00000295890 RB1CC1Q8TDY2 1594 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms