RNA–Protein interactions for RNA: ENST00000257940.6

ZC3H10-201, Transcript of zinc finger CCCH-type containing 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZC3H10, Length 7,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H10-201ENST00000257940 DCAF8L2P0C7V8 631 aa22.28■■□□□ 1.16
ZC3H10-201ENST00000257940 FAM9AQ8IZU1 332 aaPredicted RBP20.31■□□□□ 0.84
ZC3H10-201ENST00000257940 SUPT5HO00267 1087 aaKnown RBP19.85■□□□□ 0.77
ZC3H10-201ENST00000257940 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
ZC3H10-201ENST00000257940 EHMT2Q96KQ7 1210 aa19.73■□□□□ 0.75
ZC3H10-201ENST00000257940 SHROOM4Q9ULL8 1493 aa19.64■□□□□ 0.73
ZC3H10-201ENST00000257940 APLP2Q06481 763 aa19.59■□□□□ 0.73
ZC3H10-201ENST00000257940 ATP1B4Q9UN42 357 aaPredicted RBP19.34■□□□□ 0.69
ZC3H10-201ENST00000257940 MYT1LQ9UL68 1186 aa19.26■□□□□ 0.67
ZC3H10-201ENST00000257940 RANGAP1P46060 587 aaPredicted RBP19.21■□□□□ 0.67
ZC3H10-201ENST00000257940 TTBK1Q5TCY1 1321 aaPredicted RBP19.04■□□□□ 0.64
ZC3H10-201ENST00000257940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.86■□□□□ 0.61
ZC3H10-201ENST00000257940 HNRNPUL2Q1KMD3 747 aaKnown RBP18.86■□□□□ 0.61
ZC3H10-201ENST00000257940 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
ZC3H10-201ENST00000257940 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.57
ZC3H10-201ENST00000257940 PELP1Q8IZL8 1130 aaKnown RBP18.55■□□□□ 0.56
ZC3H10-201ENST00000257940 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
ZC3H10-201ENST00000257940 FBLN2P98095 1184 aa18.35■□□□□ 0.53
ZC3H10-201ENST00000257940 SLC4A1APQ9BWU0 796 aaKnown RBP18.33■□□□□ 0.52
ZC3H10-201ENST00000257940 ABCC9O60706 1549 aa18.3■□□□□ 0.52
ZC3H10-201ENST00000257940 PABPN1Q86U42 306 aaKnown RBP eCLIP18.28■□□□□ 0.52
ZC3H10-201ENST00000257940 BCANQ96GW7 911 aa18.2■□□□□ 0.5
ZC3H10-201ENST00000257940 POLR3GLQ9BT43 218 aa18.14■□□□□ 0.49
ZC3H10-201ENST00000257940 PLPPR3Q6T4P5 718 aa18.14■□□□□ 0.49
ZC3H10-201ENST00000257940 ESF1Q9H501 851 aaKnown RBP18.1■□□□□ 0.49
ZC3H10-201ENST00000257940 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
ZC3H10-201ENST00000257940 ITGAEP38570 1179 aa18.01■□□□□ 0.47
ZC3H10-201ENST00000257940 NPM1P06748 294 aaKnown RBP eCLIP17.93■□□□□ 0.46
ZC3H10-201ENST00000257940 CCER1Q8TC90 406 aaPredicted RBP17.89■□□□□ 0.46
ZC3H10-201ENST00000257940 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
ZC3H10-201ENST00000257940 ERICH6Q7L0X2 663 aa17.85■□□□□ 0.45
ZC3H10-201ENST00000257940 CNGB1Q14028 1251 aaPredicted RBP17.78■□□□□ 0.44
ZC3H10-201ENST00000257940 STAG3Q9UJ98 1225 aa17.72■□□□□ 0.43
ZC3H10-201ENST00000257940 NEFLP07196 543 aa17.65■□□□□ 0.42
ZC3H10-201ENST00000257940 TRIM52Q96A61 297 aa17.65■□□□□ 0.42
ZC3H10-201ENST00000257940 PPARGC1BQ86YN6 1023 aaKnown RBP17.65■□□□□ 0.42
ZC3H10-201ENST00000257940 FAM50AQ14320 339 aaKnown RBP17.59■□□□□ 0.41
ZC3H10-201ENST00000257940 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
ZC3H10-201ENST00000257940 ARID3CA6NKF2 412 aa17.58■□□□□ 0.41
ZC3H10-201ENST00000257940 TRHP20396 242 aaPredicted RBP17.55■□□□□ 0.4
ZC3H10-201ENST00000257940 A0A0G2JS52 829 aa17.52■□□□□ 0.4
ZC3H10-201ENST00000257940 DAXXQ9UER7 740 aaPredicted RBP17.47■□□□□ 0.39
ZC3H10-201ENST00000257940 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
ZC3H10-201ENST00000257940 NEFMP07197 916 aa17.45■□□□□ 0.38
ZC3H10-201ENST00000257940 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
ZC3H10-201ENST00000257940 ZNF326Q5BKZ1 582 aaKnown RBP17.43■□□□□ 0.38
ZC3H10-201ENST00000257940 ARID4BQ4LE39 1312 aaPredicted RBP17.41■□□□□ 0.38
ZC3H10-201ENST00000257940 ZBTB47Q9UFB7 747 aaPredicted RBP17.39■□□□□ 0.37
ZC3H10-201ENST00000257940 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
ZC3H10-201ENST00000257940 CENPBP07199 599 aaPredicted RBP17.37■□□□□ 0.37
ZC3H10-201ENST00000257940 C14orf37Q86TY3 774 aa17.36■□□□□ 0.37
ZC3H10-201ENST00000257940 AEBP2Q6ZN18 517 aaPredicted RBP17.36■□□□□ 0.37
ZC3H10-201ENST00000257940 CDK11AQ9UQ88 783 aaPredicted RBP17.35■□□□□ 0.37
ZC3H10-201ENST00000257940 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
ZC3H10-201ENST00000257940 P3H3Q8IVL6 736 aa17.31■□□□□ 0.36
ZC3H10-201ENST00000257940 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
ZC3H10-201ENST00000257940 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
ZC3H10-201ENST00000257940 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
ZC3H10-201ENST00000257940 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
ZC3H10-201ENST00000257940 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
ZC3H10-201ENST00000257940 ERCC6Q03468 1493 aa17.22■□□□□ 0.35
ZC3H10-201ENST00000257940 ZBTB7CA1YPR0 619 aa17.21■□□□□ 0.34
ZC3H10-201ENST00000257940 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
ZC3H10-201ENST00000257940 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
ZC3H10-201ENST00000257940 MYT1Q01538 1121 aa17.15■□□□□ 0.34
ZC3H10-201ENST00000257940 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
ZC3H10-201ENST00000257940 NEUROD1Q13562 356 aa17.12■□□□□ 0.33
ZC3H10-201ENST00000257940 CANXP27824 592 aaKnown RBP17.07■□□□□ 0.32
ZC3H10-201ENST00000257940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.32
ZC3H10-201ENST00000257940 KCNH8Q96L42 1107 aa17.03■□□□□ 0.32
ZC3H10-201ENST00000257940 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
ZC3H10-201ENST00000257940 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
ZC3H10-201ENST00000257940 NPHP1O15259 732 aa16.93■□□□□ 0.3
ZC3H10-201ENST00000257940 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
ZC3H10-201ENST00000257940 ARXQ96QS3 562 aa16.87■□□□□ 0.29
ZC3H10-201ENST00000257940 TSPY4P0CV99 314 aa16.83■□□□□ 0.28
ZC3H10-201ENST00000257940 TSPY10P0CW01 314 aa16.83■□□□□ 0.28
ZC3H10-201ENST00000257940 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
ZC3H10-201ENST00000257940 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
ZC3H10-201ENST00000257940 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
ZC3H10-201ENST00000257940 MLECQ14165 292 aa16.77■□□□□ 0.27
ZC3H10-201ENST00000257940 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
ZC3H10-201ENST00000257940 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
ZC3H10-201ENST00000257940 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
ZC3H10-201ENST00000257940 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
ZC3H10-201ENST00000257940 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
ZC3H10-201ENST00000257940 ANP32CO43423 234 aa16.63■□□□□ 0.25
ZC3H10-201ENST00000257940 HDGFP51858 240 aaKnown RBP16.58■□□□□ 0.24
ZC3H10-201ENST00000257940 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
ZC3H10-201ENST00000257940 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
ZC3H10-201ENST00000257940 MEX3CQ5U5Q3 659 aaKnown RBP16.52■□□□□ 0.24
ZC3H10-201ENST00000257940 CDK11BP21127 795 aaKnown RBP16.52■□□□□ 0.24
ZC3H10-201ENST00000257940 MTUS2Q5JR59 1369 aa16.51■□□□□ 0.23
ZC3H10-201ENST00000257940 TMC1Q8TDI8 760 aa16.5■□□□□ 0.23
ZC3H10-201ENST00000257940 POGKQ9P215 609 aa16.49■□□□□ 0.23
ZC3H10-201ENST00000257940 TMX4Q9H1E5 349 aaPredicted RBP16.47■□□□□ 0.23
ZC3H10-201ENST00000257940 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
ZC3H10-201ENST00000257940 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
ZC3H10-201ENST00000257940 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
ZC3H10-201ENST00000257940 WDR43Q15061 677 aaKnown RBP eCLIP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms